Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa026066 Carpinus fangiana HOM05D003560 ORTHO05D123987 0.0e+00 2682.1 1497 100.0
Cc06_g14510 Coffea canephora HOM05D003560 ORTHO05D004500 5.7e-10 71.6 545 20.7
PGSC0003DMG400011153 Solanum tuberosum HOM05D003560 ORTHO05D004500 8.2e-09 67.8 530 19.6
Rhsim01G0023800 Rhododendron simsii HOM05D003560 ORTHO05D004500 1.4e-08 67.0 545 20.2
Sopen07g002100 Solanum pennellii HOM05D003560 ORTHO05D004500 4.1e-08 65.5 546 20.1
SEGI_31223 Sequoiadendron giganteum HOM05D003560 ORTHO05D004500 5.3e-08 65.1 500 20.8
FAN22G1868 Fragaria x ananassa HOM05D003560 ORTHO05D004500 9.0e-08 64.3 386 23.3
Solyc07g005970.3 Solanum lycopersicum HOM05D003560 ORTHO05D004500 1.2e-07 63.9 546 20.0
MELO3C004116.2 Cucumis melo HOM05D003560 ORTHO05D004500 1.5e-07 63.5 444 21.8
FAN12G2950 Fragaria x ananassa HOM05D003560 ORTHO05D004500 1.5e-07 63.5 379 22.7
AUR62028380 Chenopodium quinoa HOM05D003560 ORTHO05D004500 2.0e-07 63.2 533 20.1
ClCG02G014310 Citrullus lanatus HOM05D003560 ORTHO05D004500 2.6e-07 62.8 430 22.1
FvH4_4g10150 Fragaria vesca HOM05D003560 ORTHO05D004500 2.6e-07 62.8 379 22.7
FAN17G2275 Fragaria x ananassa HOM05D003560 ORTHO05D004500 3.4e-07 62.4 374 23.0
C07p58220 Brassica napus HOM05D003560 ORTHO05D004500 4.5e-07 62.0 390 22.3
Duzib187G1514 Durio zibethinus HOM05D003560 ORTHO05D004500 4.5e-07 62.0 385 22.6
FAN12G4167 Fragaria x ananassa HOM05D003560 ORTHO05D004500 4.5e-07 62.0 378 22.8
CARHR238630 Cardamine hirsuta HOM05D003560 ORTHO05D004500 5.9e-07 61.6 503 20.5
Hma1.2p1_0222F.1_g093890 Hydrangea macrophylla HOM05D003560 ORTHO05D004500 7.7e-07 61.2 536 19.8
Nitab4.5_0001036g0120 Nicotiana tabacum HOM05D003560 ORTHO05D004500 7.7e-07 61.2 532 19.0
Sed0017470 Sechium edule HOM05D003560 ORTHO05D004500 7.7e-07 61.2 546 20.9
vmacro13051 Vaccinium macrocarpon HOM05D003560 ORTHO05D004500 7.7e-07 61.2 552 19.9
VMungo1215G0464 Vigna mungo HOM05D003560 ORTHO05D004500 7.7e-07 61.2 548 20.8
BcaNung04829 Brassica carinata HOM05D003560 ORTHO05D004500 1.0e-06 60.8 430 21.2
A01p07380 Brassica napus HOM05D003560 ORTHO05D004500 1.0e-06 60.8 544 21.9
MD04G1049500 Malus domestica HOM05D003560 ORTHO05D004500 1.0e-06 60.8 455 20.9
BolC7t46280H Brassica oleracea HOM05D003560 ORTHO05D004500 1.3e-06 60.5 371 22.1
BraA01t00687Z Brassica rapa HOM05D003560 ORTHO05D004500 1.7e-06 60.1 544 21.7
Duzib150G1559 Durio zibethinus HOM05D003560 ORTHO05D004500 1.7e-06 60.1 352 24.4
Gohir.D05G008900 Gossypium hirsutum HOM05D003560 ORTHO05D004500 1.7e-06 60.1 472 20.8
Gorai.009G009100 Gossypium raimondii HOM05D003560 ORTHO05D004500 1.7e-06 60.1 472 20.8
Nitab4.5_0006744g0010 Nicotiana tabacum HOM05D003560 ORTHO05D004500 1.7e-06 60.1 532 18.6
SalBow1G1777 Salvia bowleyana HOM05D003560 ORTHO05D004500 1.7e-06 60.1 545 20.2
arahy.Tifrunner.gnm1.ann1.752C0V Arachis hypogaea HOM05D003560 ORTHO05D004500 2.2e-06 59.7 443 21.4
Gohir.A05G008100 Gossypium hirsutum HOM05D003560 ORTHO05D004500 2.2e-06 59.7 472 20.8
Peaxi162Scf00563g00417 Petunia axillaris HOM05D003560 ORTHO05D004500 2.2e-06 59.7 532 18.0
RcHm_v2.0_Chr4g0405611 Rosa chinensis HOM05D003560 ORTHO05D004500 2.2e-06 59.7 367 22.3
arahy.Tifrunner.gnm1.ann1.IP23DV Arachis hypogaea HOM05D003560 ORTHO05D004500 2.9e-06 59.3 443 21.4
AL7G21340 Arabidopsis lyrata HOM05D003560 ORTHO05D004500 3.8e-06 58.9 503 20.3
Glyma.17G071400 Glycine max HOM05D003560 ORTHO05D004500 5.0e-06 58.5 526 20.7
ATR0749G018 Amborella trichopoda HOM05D003560 ORTHO05D004500 6.5e-06 58.2 721 19.1
SGA_v2.0_scaffold265G46080 Striga asiatica HOM05D003560 ORTHO05D004500 6.5e-06 58.2 533 19.5
BraA08t33870Z Brassica rapa HOM05D003560 ORTHO05D004500 8.5e-06 57.8 338 23.4


User provided reference genes

Program Settings