Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa026035 Carpinus fangiana HOM05D000549 ORTHO05D126449 1.9e-173 612.5 312 100.0
vmacro01035 Vaccinium macrocarpon HOM05D000549 ORTHO05D006874 1.2e-10 71.6 226 28.3
Rhsim12G0021800 Rhododendron simsii HOM05D000549 ORTHO05D006874 2.2e-09 67.4 227 27.3
Lj6C833T8 Lonicera japonica HOM05D000549 ORTHO05D006874 5.0e-09 66.2 221 26.2
Cfa026361 Carpinus fangiana HOM05D000549 ORTHO05D006202 8.5e-09 65.5 114 33.3
BraA05t22850Z Brassica rapa HOM05D000549 ORTHO05D001527 1.9e-08 64.3 203 26.1
C05p60490 Brassica napus HOM05D000549 ORTHO05D001527 2.5e-08 63.9 192 27.1
MCO15G175 Micromonas commoda HOM05D000549 ORTHO05D001527 2.5e-08 63.9 171 26.3
A05p41270 Brassica napus HOM05D000549 ORTHO05D001527 3.2e-08 63.5 192 27.1
Phvul.003G096500 Phaseolus vulgaris HOM05D000549 ORTHO05D001527 3.2e-08 63.5 185 25.9
BolC5t34703H Brassica oleracea HOM05D000549 ORTHO05D001527 5.5e-08 62.8 192 27.1
CBR_g50345 Chara braunii HOM05D000549 ORTHO05D006874 5.5e-08 62.8 113 31.9
CSS0046508 Camellia sinensis var. sinensis HOM05D000549 ORTHO05D006874 7.2e-08 62.4 224 25.4
Glyma.17G027600 Glycine max HOM05D000549 ORTHO05D001527 7.2e-08 62.4 187 26.7
CSS0027356 Camellia sinensis var. sinensis HOM05D000549 ORTHO05D006874 9.3e-08 62.0 224 25.4
Zm00001eb249240 Zea mays HOM05D000549 ORTHO05D006202 9.3e-08 62.0 128 32.0
Nitab4.5_0000513g0100 Nicotiana tabacum HOM05D000549 ORTHO05D001527 1.2e-07 61.6 229 25.8
Sp3g05820 Schrenkiella parvula HOM05D000549 ORTHO05D001527 1.6e-07 61.2 192 27.1
MSTRG.2466 Avicennia marina HOM05D000549 ORTHO05D006874 2.1e-07 60.8 210 27.6
MBI11_g29216_MAGBIO Magnolia biondii HOM05D000549 ORTHO05D006874 2.1e-07 60.8 213 25.4
Peaxi162Scf00034g00110 Petunia axillaris HOM05D000549 ORTHO05D001527 2.1e-07 60.8 171 27.5
Atru.chr11.2394 Acer truncatum HOM05D000549 ORTHO05D006874 2.7e-07 60.5 226 26.5
BcaC09g47925 Brassica carinata HOM05D000549 ORTHO05D001527 2.7e-07 60.5 192 27.1
CAN.G21.40 Capsicum annuum HOM05D000549 ORTHO05D001527 3.6e-07 60.1 183 26.2
VMungo1215G2040 Vigna mungo HOM05D000549 ORTHO05D001527 3.6e-07 60.1 188 24.5
SEGI_23101 Sequoiadendron giganteum HOM05D000549 ORTHO05D006874 6.1e-07 59.3 202 27.2
Actinidia30611 Actinidia chinensis HOM05D000549 ORTHO05D006874 7.9e-07 58.9 230 25.2
Nitab4.5_0000513g0160 Nicotiana tabacum HOM05D000549 ORTHO05D001527 1.0e-06 58.5 203 27.6
Nitab4.5_0008063g0010 Nicotiana tabacum HOM05D000549 ORTHO05D001527 1.0e-06 58.5 171 25.7
Aa31LG5G17440 Aethionema arabicum HOM05D000549 ORTHO05D001527 1.3e-06 58.2 176 25.6
BraA03t12672Z Brassica rapa HOM05D000549 ORTHO05D001527 1.3e-06 58.2 192 26.0
DCAR_030511 Daucus carota HOM05D000549 ORTHO05D001527 1.3e-06 58.2 173 24.9
Gohir.A08G241700 Gossypium hirsutum HOM05D000549 ORTHO05D001527 1.3e-06 58.2 190 24.2
Oeu002246.1 Olea europaea HOM05D000549 ORTHO05D001527 1.3e-06 58.2 175 28.6
Ah.03g135820 Amaranthus hybridus HOM05D000549 ORTHO05D006874 1.8e-06 57.8 221 25.3
Aqoxy5G03240 Aquilegia oxysepala HOM05D000549 ORTHO05D006874 1.8e-06 57.8 101 33.7
A03p34920 Brassica napus HOM05D000549 ORTHO05D001527 1.8e-06 57.8 192 26.0
Gohir.A10G165600 Gossypium hirsutum HOM05D000549 ORTHO05D001527 1.8e-06 57.8 218 26.1
Manes.12G006600 Manihot esculenta HOM05D000549 ORTHO05D006874 1.8e-06 57.8 211 26.5
PSO478G2361 Papaver somniferum HOM05D000549 ORTHO05D006874 1.8e-06 57.8 219 24.2
TPR.G3181 Trifolium pratense HOM05D000549 ORTHO05D001527 1.8e-06 57.8 187 25.7
Carub.0003s0639 Capsella rubella HOM05D000549 ORTHO05D001527 2.3e-06 57.4 176 26.7
AUR62005679 Chenopodium quinoa HOM05D000549 ORTHO05D006874 2.3e-06 57.4 226 25.2
ClCG07G015310 Citrullus lanatus HOM05D000549 ORTHO05D006874 2.3e-06 57.4 101 33.7
PRCOL_00000613 Prasinoderma coloniale HOM05D000549 ORTHO05D001527 2.3e-06 57.4 201 25.4
Hund06115 Selenicereus undatus HOM05D000549 ORTHO05D006874 2.3e-06 57.4 188 27.7
HPP92_000335 Vanilla planifolia HOM05D000549 ORTHO05D006874 2.3e-06 57.4 98 31.6
AagrBONN_evm.TU.Sc2ySwM_117.905 Anthoceros agrestis HOM05D000549 ORTHO05D006874 3.0e-06 57.0 200 24.5
C03p42500 Brassica napus HOM05D000549 ORTHO05D001527 3.0e-06 57.0 192 25.5
BolC3t16520H Brassica oleracea HOM05D000549 ORTHO05D001527 3.0e-06 57.0 192 25.5
Migut.E00002 Erythranthe guttata HOM05D000549 ORTHO05D006874 3.0e-06 57.0 214 27.1
Migut.N00084 Erythranthe guttata HOM05D000549 ORTHO05D001527 3.0e-06 57.0 192 25.0
Os05g0155000 Oryza sativa ssp. japonica HOM05D000549 ORTHO05D001527 3.0e-06 57.0 175 27.4
Potri.001G061000 Populus trichocarpa HOM05D000549 ORTHO05D006874 3.0e-06 57.0 113 31.9
BcaC05g30563 Brassica carinata HOM05D000549 ORTHO05D001527 3.9e-06 56.6 193 25.9
CANSAT01G1614 Cannabis sativa HOM05D000549 ORTHO05D006874 3.9e-06 56.6 213 25.8
Eucgr.K02175 Eucalyptus grandis HOM05D000549 ORTHO05D006874 3.9e-06 56.6 113 27.4
Eucgr.K02180 Eucalyptus grandis HOM05D000549 ORTHO05D006874 3.9e-06 56.6 113 27.4
Thhalv10020152m.g Eutrema salsugineum HOM05D000549 ORTHO05D001527 3.9e-06 56.6 176 26.7
Lalb_Chr13g0303531 Lupinus albus HOM05D000549 ORTHO05D001527 3.9e-06 56.6 175 25.7
Nitab4.5_0000895g0010 Nicotiana tabacum HOM05D000549 ORTHO05D001527 3.9e-06 56.6 201 23.9
A03p58590 Brassica napus HOM05D000549 ORTHO05D001527 5.1e-06 56.2 176 23.9
A03p58640 Brassica napus HOM05D000549 ORTHO05D001527 5.1e-06 56.2 176 23.9
CAN.G484.46 Capsicum annuum HOM05D000549 ORTHO05D001527 5.1e-06 56.2 204 26.0
Glyma.17G027700 Glycine max HOM05D000549 ORTHO05D001527 5.1e-06 56.2 189 24.3
Lsat_1_v5_gn_4_1980 Lactuca sativa HOM05D000549 ORTHO05D006874 5.1e-06 56.2 205 25.9
Potri.008G220400 Populus trichocarpa HOM05D000549 ORTHO05D001527 5.1e-06 56.2 196 26.0
Potri.010G011900 Populus trichocarpa HOM05D000549 ORTHO05D001527 5.1e-06 56.2 196 27.6
Sabra01G0043900 Salix brachista HOM05D000549 ORTHO05D006874 5.1e-06 56.2 113 30.1
SMO347G0065 Selaginella moellendorffii HOM05D000549 ORTHO05D001527 5.1e-06 56.2 80 36.2
Solyc12g099440.3 Solanum lycopersicum HOM05D000549 ORTHO05D001527 5.1e-06 56.2 205 25.4
CAN.G421.10 Capsicum annuum HOM05D000549 ORTHO05D001527 6.7e-06 55.8 92 30.4
CARHR081470 Cardamine hirsuta HOM05D000549 ORTHO05D001527 6.7e-06 55.8 176 26.7
CDE11G0311 Ceratophyllum demersum HOM05D000549 ORTHO05D001527 6.7e-06 55.8 196 25.5
Dinv33064 Davidia involucrata HOM05D000549 ORTHO05D001527 6.7e-06 55.8 81 34.6
Migut.K00503 Erythranthe guttata HOM05D000549 ORTHO05D001527 6.7e-06 55.8 175 27.4
Eucgr.H04595 Eucalyptus grandis HOM05D000549 ORTHO05D006874 6.7e-06 55.8 101 27.7
Gorai.011G191800 Gossypium raimondii HOM05D000549 ORTHO05D001527 6.7e-06 55.8 218 25.7
MD13G1124500 Malus domestica HOM05D000549 ORTHO05D006874 6.7e-06 55.8 219 25.1
Nitab4.5_0000570g0260 Nicotiana tabacum HOM05D000549 ORTHO05D001527 6.7e-06 55.8 201 23.9
Sabra02G0156300 Salix brachista HOM05D000549 ORTHO05D001527 6.7e-06 55.8 181 24.9
AagrBONN_evm.TU.Sc2ySwM_368.1747 Anthoceros agrestis HOM05D000549 ORTHO05D006202 8.7e-06 55.5 78 39.7
CANSAT01G0648 Cannabis sativa HOM05D000549 ORTHO05D006874 8.7e-06 55.5 217 26.3
CAN.G885.2 Capsicum annuum HOM05D000549 ORTHO05D001527 8.7e-06 55.5 80 33.8
COL.COLO4_17381 Corchorus olitorius HOM05D000549 ORTHO05D006874 8.7e-06 55.5 213 25.4
Dinv29738 Davidia involucrata HOM05D000549 ORTHO05D001527 8.7e-06 55.5 202 26.2
Eucgr.H04584 Eucalyptus grandis HOM05D000549 ORTHO05D006874 8.7e-06 55.5 113 26.5
Peaxi162Scf00034g00027 Petunia axillaris HOM05D000549 ORTHO05D001527 8.7e-06 55.5 80 35.0
Sopen08g022270 Solanum pennellii HOM05D000549 ORTHO05D001527 8.7e-06 55.5 171 24.6
PGSC0003DMG400003906 Solanum tuberosum HOM05D000549 ORTHO05D001527 8.7e-06 55.5 176 26.1


User provided reference genes

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