Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa026003 Carpinus fangiana HOM05D006499 ORTHO05D007874 4.6e-95 351.3 187 100.0
Cre16.g674650 Chlamydomonas reinhardtii HOM05D005658 ORTHO05D006989 4.3e-16 89.0 187 32.6
Haze_11761 Corylus avellana HOM05D006499 ORTHO05D007874 1.2e-10 70.9 181 34.3
CBR_g48432 Chara braunii HOM05D005658 ORTHO05D006989 2.7e-10 69.7 160 35.0
DCAR_026894 Daucus carota HOM05D006499 ORTHO05D007874 4.6e-10 68.9 178 33.7
CANSAT01G2706 Cannabis sativa HOM05D006499 ORTHO05D007874 6.0e-10 68.6 190 34.7
Cfa008745 Carpinus fangiana HOM05D006499 ORTHO05D007874 3.0e-09 66.2 181 33.7
CiPaw.06G061000 Carya illinoinensis HOM05D006499 ORTHO05D007874 3.9e-09 65.9 175 33.7
Os04g0525800 Oryza sativa ssp. japonica HOM05D006499 ORTHO05D007874 5.1e-09 65.5 180 33.3
HPP92_005057 Vanilla planifolia HOM05D006499 ORTHO05D007874 5.1e-09 65.5 178 31.5
ClCG02G014040 Citrullus lanatus HOM05D006499 ORTHO05D007874 1.1e-08 64.3 181 33.1
SMO147G0229 Selaginella moellendorffii HOM05D005658 ORTHO05D006989 1.1e-08 64.3 186 29.0
CsaV3_5G006120 Cucumis sativus L. HOM05D000045 ORTHO05D007874 1.9e-08 63.5 179 33.5
Lj2g0027544 Lotus japonicus HOM05D006499 ORTHO05D007874 2.5e-08 63.2 179 31.8
MELO3C011747.2 Cucumis melo HOM05D000045 ORTHO05D007874 3.3e-08 62.8 179 33.0
QL03p017736 Quercus lobata HOM05D006499 ORTHO05D007874 3.3e-08 62.8 187 32.6
Sed0001124 Sechium edule HOM05D006499 ORTHO05D007874 5.6e-08 62.0 179 33.5
Sc06g0006830 Simmondsia chinensis HOM05D006499 ORTHO05D007874 9.6e-08 61.2 137 37.2
QL03p017519 Quercus lobata HOM05D006499 ORTHO05D007874 1.2e-07 60.8 187 32.1
Zm00001eb076800 Zea mays HOM05D006499 ORTHO05D007874 1.2e-07 60.8 187 32.1
Cre17.g706800 Chlamydomonas reinhardtii HOM05D006499 ORTHO05D007874 1.6e-07 60.5 159 28.9
SMO116G0488 Selaginella moellendorffii HOM05D006499 ORTHO05D007874 1.6e-07 60.5 182 31.9
TAR622G1217 Trochodendron aralioides HOM05D006499 ORTHO05D007874 1.6e-07 60.5 183 29.0
Thhalv10021560m.g Eutrema salsugineum HOM05D005658 ORTHO05D006989 2.1e-07 60.1 153 30.1
MBI06_g20294_MAGBIO Magnolia biondii HOM05D006499 ORTHO05D007874 2.1e-07 60.1 183 29.5
Psat6g099520 Pisum sativum HOM05D006499 ORTHO05D007874 2.1e-07 60.1 173 31.8
Lsat_1_v5_gn_8_80081 Lactuca sativa HOM05D006499 ORTHO05D007874 2.8e-07 59.7 173 30.6
ATR0618G206 Amborella trichopoda HOM05D006499 ORTHO05D007874 3.6e-07 59.3 177 28.2
CARHR091380 Cardamine hirsuta HOM05D005658 ORTHO05D006989 4.7e-07 58.9 151 29.8
Glyma.09G283200 Glycine max HOM05D006499 ORTHO05D007874 4.7e-07 58.9 184 32.1
MCO09G247 Micromonas commoda HOM05D006499 ORTHO05D007874 4.7e-07 58.9 144 31.2
unitig_578.g16567 Utricularia gibba HOM05D006499 ORTHO05D007874 6.2e-07 58.5 179 29.1
Ca_29435_v3 Cicer arietinum L. HOM05D006499 ORTHO05D007874 8.1e-07 58.2 182 29.7
Eucgr.J02954 Eucalyptus grandis HOM05D005658 ORTHO05D006989 8.1e-07 58.2 151 30.5
Lalb_Chr10g0094911 Lupinus albus HOM05D006499 ORTHO05D007874 8.1e-07 58.2 177 31.1
Pp3c13_4590 Physcomitrium patens HOM05D005658 ORTHO05D006989 8.1e-07 58.2 150 31.3
MSTRG.9467 Avicennia marina HOM05D005658 ORTHO05D006989 1.1e-06 57.8 186 29.6
Phvul.003G004400 Phaseolus vulgaris HOM05D006499 ORTHO05D007874 1.4e-06 57.4 138 36.2
Rhsim05G0006600 Rhododendron simsii HOM05D006499 ORTHO05D007874 1.4e-06 57.4 175 30.3
Mapoly0052s0007 Marchantia polymorpha HOM05D005658 ORTHO05D006989 1.8e-06 57.0 150 28.7
AagrBONN_evm.TU.Sc2ySwM_369.407 Anthoceros agrestis HOM05D002948 ORTHO05D003577 2.4e-06 56.6 149 32.2
Aqoxy3G00285 Aquilegia oxysepala HOM05D006499 ORTHO05D007874 2.4e-06 56.6 173 28.3
CANSAT56G2118 Cannabis sativa HOM05D005658 ORTHO05D006989 3.1e-06 56.2 146 30.8
Lalb_Chr04g0258971 Lupinus albus HOM05D006499 ORTHO05D007874 3.1e-06 56.2 182 30.8
Medtr1g038530 Medicago truncatula HOM05D006499 ORTHO05D007874 4.0e-06 55.8 163 31.3
MCO09G426 Micromonas commoda HOM05D006499 ORTHO05D007874 4.0e-06 55.8 127 33.9
vmacro04318 Vaccinium macrocarpon HOM05D006499 ORTHO05D007874 4.0e-06 55.8 175 29.1
Actinidia08995 Actinidia chinensis HOM05D005658 ORTHO05D006989 5.2e-06 55.5 152 30.3
Actinidia13714 Actinidia chinensis HOM05D006499 ORTHO05D007874 5.2e-06 55.5 180 30.6
CANSAT56G4082 Cannabis sativa HOM05D005658 ORTHO05D006989 5.2e-06 55.5 150 30.0
Ciclev10026541m.g Citrus clementina HOM05D005658 ORTHO05D006989 5.2e-06 55.5 150 29.3
Prupe.1G348500 Prunus persica HOM05D006499 ORTHO05D007874 5.2e-06 55.5 181 30.4
ATR0736G109 Amborella trichopoda HOM05D005658 ORTHO05D006989 6.8e-06 55.1 151 29.1
Ca_05122_v3 Cicer arietinum L. HOM05D006499 ORTHO05D007874 6.8e-06 55.1 172 30.2
MD16G1003500 Malus domestica HOM05D006499 ORTHO05D007874 6.8e-06 55.1 193 31.6
Medtr1g037830 Medicago truncatula HOM05D006499 ORTHO05D007874 6.8e-06 55.1 163 30.7
Nn3g18122 Nelumbo nucifera HOM05D005658 ORTHO05D006989 6.8e-06 55.1 150 30.0
SalBow7G0412 Salvia bowleyana HOM05D005658 ORTHO05D006989 6.8e-06 55.1 150 29.3
Sp3g14560 Schrenkiella parvula HOM05D005658 ORTHO05D006989 6.8e-06 55.1 191 28.8


User provided reference genes

Program Settings