Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa025982 Carpinus fangiana HOM05D005152 ORTHO05D006162 6.1e-114 414.1 197 100.0
MCO05G618 Micromonas commoda HOM05D005152 ORTHO05D006162 2.6e-11 73.2 155 26.5
Pp3c25_13080 Physcomitrium patens HOM05D005152 ORTHO05D006162 1.3e-10 70.9 161 28.0
Pp3c5_25710 Physcomitrium patens HOM05D005152 ORTHO05D006162 1.4e-09 67.4 170 25.9
Carub.0006s1072 Capsella rubella HOM05D005152 ORTHO05D006162 1.8e-09 67.0 159 26.4
CARHR200900 Cardamine hirsuta HOM05D005152 ORTHO05D006162 3.1e-09 66.2 158 27.8
Mapoly0027s0150 Marchantia polymorpha HOM05D005152 ORTHO05D006162 4.1e-09 65.9 131 28.2
AT5G12220 Arabidopsis thaliana HOM05D005152 ORTHO05D006162 5.3e-09 65.5 158 27.2
Thhalv10012989m.g Eutrema salsugineum HOM05D005152 ORTHO05D006162 9.1e-09 64.7 170 26.5
MBI19_g42986_MAGBIO Magnolia biondii HOM05D005152 ORTHO05D006162 1.6e-08 63.9 166 25.3
Os12g0189900 Oryza sativa ssp. japonica HOM05D005152 ORTHO05D006162 4.5e-08 62.4 173 24.9
AL6G23010 Arabidopsis lyrata HOM05D005152 ORTHO05D006162 5.9e-08 62.0 158 26.6
AagrBONN_evm.TU.Sc2ySwM_228.1465 Anthoceros agrestis HOM05D005152 ORTHO05D006162 7.7e-08 61.6 167 26.9
CAN.G1514.1 Capsicum annuum HOM05D005152 ORTHO05D006162 7.7e-08 61.6 159 25.2
Sopen07g023910 Solanum pennellii HOM05D005152 ORTHO05D006162 7.7e-08 61.6 159 24.5
Solyc07g045370.3 Solanum lycopersicum HOM05D005152 ORTHO05D006162 1.0e-07 61.2 159 24.5
PGSC0003DMG400017379 Solanum tuberosum HOM05D005152 ORTHO05D006162 1.0e-07 61.2 159 24.5
Ah.06g194700 Amaranthus hybridus HOM05D005152 ORTHO05D006178 1.7e-07 60.5 163 25.8
Medtr5g089190 Medicago truncatula HOM05D005152 ORTHO05D006162 1.7e-07 60.5 162 24.7
Zm00001eb150380 Zea mays HOM05D005152 ORTHO05D006162 1.7e-07 60.5 175 25.1
MSTRG.20931 Avicennia marina HOM05D005152 ORTHO05D006162 2.2e-07 60.1 162 24.1
A03p05460 Brassica napus HOM05D005152 ORTHO05D006162 2.2e-07 60.1 168 25.6
C03p06370 Brassica napus HOM05D005152 ORTHO05D006162 2.2e-07 60.1 168 27.4
BolC3t13143H Brassica oleracea HOM05D005152 ORTHO05D006162 2.2e-07 60.1 168 27.4
AUR62000209 Chenopodium quinoa HOM05D005152 ORTHO05D006162 2.2e-07 60.1 159 25.8
unitig_748.g8148 Utricularia gibba HOM05D005152 ORTHO05D006162 2.2e-07 60.1 137 27.0
AUR62006555 Chenopodium quinoa HOM05D005152 ORTHO05D006162 3.8e-07 59.3 159 26.4
ATR1096G100 Amborella trichopoda HOM05D005152 ORTHO05D006162 6.5e-07 58.5 124 25.8
BraA03t09884Z Brassica rapa HOM05D005152 ORTHO05D006162 6.5e-07 58.5 168 25.6
Nn7g36798 Nelumbo nucifera HOM05D005152 ORTHO05D006162 6.5e-07 58.5 179 21.8
BcaB01g05418 Brassica carinata HOM05D005152 ORTHO05D006162 8.5e-07 58.2 167 26.9
LjContig00564g0003451 Lotus japonicus HOM05D005152 ORTHO05D006162 8.5e-07 58.2 157 23.6
CDE04G1157 Ceratophyllum demersum HOM05D005152 ORTHO05D006162 1.5e-06 57.4 149 25.5
Hund07432 Selenicereus undatus HOM05D005152 ORTHO05D006162 1.5e-06 57.4 173 23.7
Aqoxy7G02965 Aquilegia oxysepala HOM05D005152 ORTHO05D006162 1.9e-06 57.0 163 22.7
arahy.Tifrunner.gnm1.ann1.3CD1QA Arachis hypogaea HOM05D005152 ORTHO05D006162 1.9e-06 57.0 160 23.8
arahy.Tifrunner.gnm1.ann1.NHHR58 Arachis hypogaea HOM05D005152 ORTHO05D006162 1.9e-06 57.0 160 23.8
EL10Ac4g10101 Beta vulgaris HOM05D005152 ORTHO05D006162 1.9e-06 57.0 159 25.2
Glyma.02G278500 Glycine max HOM05D005152 ORTHO05D006162 1.9e-06 57.0 157 21.7
Glyma.14G036100 Glycine max HOM05D005152 ORTHO05D006162 1.9e-06 57.0 157 21.7
Nitab4.5_0000236g0070 Nicotiana tabacum HOM05D005152 ORTHO05D006162 2.5e-06 56.6 157 22.9
Psat2g020920 Pisum sativum HOM05D005152 ORTHO05D006162 2.5e-06 56.6 159 22.6
SEGI_04037 Sequoiadendron giganteum HOM05D005152 ORTHO05D006162 2.5e-06 56.6 159 24.5
Atru.chr11.1399 Acer truncatum HOM05D005152 ORTHO05D006162 4.2e-06 55.8 129 26.4
Ca_06203_v3 Cicer arietinum L. HOM05D005152 ORTHO05D006162 7.2e-06 55.1 157 22.3
Ca_06206_v3 Cicer arietinum L. HOM05D005152 ORTHO05D006162 7.2e-06 55.1 157 22.3
Phvul.008G202300 Phaseolus vulgaris HOM05D005152 ORTHO05D006162 9.4e-06 54.7 157 22.3
Sc09g0005710 Simmondsia chinensis HOM05D005152 ORTHO05D006162 9.4e-06 54.7 162 27.2


User provided reference genes

Program Settings