Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa025969 Carpinus fangiana HOM05D004682 ORTHO05D006197 0.0e+00 1870.9 1079 100.0
Mapoly0007s0132 Marchantia polymorpha HOM05D004682 ORTHO05D006197 7.6e-41 173.7 622 25.2
Pp3c9_5570 Physcomitrium patens HOM05D004682 ORTHO05D006197 3.2e-39 168.3 621 26.4
ATR0706G112 Amborella trichopoda HOM05D004682 ORTHO05D006197 9.3e-39 166.8 631 26.0
CDE05G1251 Ceratophyllum demersum HOM05D004682 ORTHO05D006197 3.9e-37 161.4 610 25.4
vmacro02515 Vaccinium macrocarpon HOM05D004682 ORTHO05D006197 5.1e-37 161.0 643 24.7
Actinidia00705 Actinidia chinensis HOM05D004682 ORTHO05D006197 6.7e-37 160.6 619 24.1
AagrBONN_evm.TU.Sc2ySwM_369.560 Anthoceros agrestis HOM05D004682 ORTHO05D006197 1.1e-36 159.8 774 24.0
SEGI_13218 Sequoiadendron giganteum HOM05D004682 ORTHO05D006197 1.5e-36 159.5 623 24.9
CSS0044691 Camellia sinensis var. sinensis HOM05D004682 ORTHO05D006197 4.3e-36 157.9 620 24.4
SMO347G0479 Selaginella moellendorffii HOM05D004682 ORTHO05D006197 5.7e-36 157.5 577 25.5
PSO170G5080 Papaver somniferum HOM05D004682 ORTHO05D006197 1.3e-35 156.4 633 24.8
Duzib138G0788 Durio zibethinus HOM05D004682 ORTHO05D006197 1.6e-35 156.0 621 24.5
CARHR143360 Cardamine hirsuta HOM05D004682 ORTHO05D006197 2.1e-35 155.6 635 23.9
Sp4g29900 Schrenkiella parvula HOM05D004682 ORTHO05D006197 2.1e-35 155.6 620 24.7
unitig_22.g5252 Utricularia gibba HOM05D004682 ORTHO05D006197 2.1e-35 155.6 644 25.5
THA.LOC104817537 Tarenaya hassleriana HOM05D004682 ORTHO05D006197 2.8e-35 155.2 619 24.6
Migut.D00237 Erythranthe guttata HOM05D004682 ORTHO05D006197 3.7e-35 154.8 634 24.0
PSO407G0071 Papaver somniferum HOM05D004682 ORTHO05D006197 4.8e-35 154.5 623 24.6
AL4G47570 Arabidopsis lyrata HOM05D004682 ORTHO05D006197 8.2e-35 153.7 624 24.2
Thhalv10001288m.g Eutrema salsugineum HOM05D004682 ORTHO05D006197 8.2e-35 153.7 620 24.5
MBI19_g27957_MAGBIO Magnolia biondii HOM05D004682 ORTHO05D006197 8.2e-35 153.7 616 24.8
Rhsim13G0018300 Rhododendron simsii HOM05D004682 ORTHO05D006197 1.8e-34 152.5 635 24.4
Ciclev10018593m.g Citrus clementina HOM05D004682 ORTHO05D006197 2.4e-34 152.1 601 24.5
HanXRQChr10g0283031 Helianthus annuus HOM05D004682 ORTHO05D006197 2.4e-34 152.1 617 23.7
MD11G1296700 Malus domestica HOM05D004682 ORTHO05D006197 2.4e-34 152.1 619 25.7
Aqoxy2G03153 Aquilegia oxysepala HOM05D004682 ORTHO05D006197 3.1e-34 151.8 626 25.6
Cc01_g20100 Coffea canephora HOM05D004682 ORTHO05D006197 3.1e-34 151.8 628 23.6
Eucgr.K03425 Eucalyptus grandis HOM05D004682 ORTHO05D006197 3.1e-34 151.8 668 24.0
Gohir.D11G123600 Gossypium hirsutum HOM05D004682 ORTHO05D006197 3.1e-34 151.8 623 24.9
Gohir.A11G118700 Gossypium hirsutum HOM05D004682 ORTHO05D006197 4.1e-34 151.4 623 24.9
BcaB02g08728 Brassica carinata HOM05D004682 ORTHO05D006197 6.9e-34 150.6 620 24.2
Prupe.8G250900 Prunus persica HOM05D004682 ORTHO05D006197 6.9e-34 150.6 620 25.6
SalBow3G2371 Salvia bowleyana HOM05D004682 ORTHO05D006197 6.9e-34 150.6 636 22.6
Lj1g0026346 Lotus japonicus HOM05D004682 ORTHO05D006197 9.0e-34 150.2 621 24.0
CBR_g31051 Chara braunii HOM05D004682 ORTHO05D006197 1.2e-33 149.8 617 24.8
Carub.0004s3070 Capsella rubella HOM05D004682 ORTHO05D006197 2.0e-33 149.1 624 23.9
Dinv32984 Davidia involucrata HOM05D004682 ORTHO05D006197 2.0e-33 149.1 621 24.6
Gorai.007G132500 Gossypium raimondii HOM05D004682 ORTHO05D006197 2.0e-33 149.1 636 24.7
A05p00090 Brassica napus HOM05D004682 ORTHO05D006197 2.6e-33 148.7 620 24.0
Thecc.01G288600 Theobroma cacao HOM05D004682 ORTHO05D006197 2.6e-33 148.7 621 24.3
BraA05t19005Z Brassica rapa HOM05D004682 ORTHO05D006197 3.4e-33 148.3 620 24.0
Aa31LG1G29400 Aethionema arabicum HOM05D004682 ORTHO05D006197 4.5e-33 147.9 620 24.2
AT2G47980 Arabidopsis thaliana HOM05D004682 ORTHO05D006197 4.5e-33 147.9 620 23.5
arahy.Tifrunner.gnm1.ann1.SJK0SQ Arachis hypogaea HOM05D004682 ORTHO05D006197 4.5e-33 147.9 620 23.5
PGR044G1334 Punica granatum HOM05D004682 ORTHO05D006197 4.5e-33 147.9 612 24.7
BcaC02g12533 Brassica carinata HOM05D004682 ORTHO05D006197 7.6e-33 147.1 620 23.7
C04p00010 Brassica napus HOM05D004682 ORTHO05D006197 7.6e-33 147.1 620 23.7
BolC4t21648H Brassica oleracea HOM05D004682 ORTHO05D006197 7.6e-33 147.1 620 23.7
FvH4_2g24570 Fragaria vesca HOM05D004682 ORTHO05D006197 1.0e-32 146.7 618 24.8
FAN24G1905 Fragaria x ananassa HOM05D004682 ORTHO05D006197 1.0e-32 146.7 618 24.8
HPP92_017192 Vanilla planifolia HOM05D004682 ORTHO05D006197 1.0e-32 146.7 620 24.2
RcHm_v2.0_Chr6g0292391 Rosa chinensis HOM05D004682 ORTHO05D006197 1.3e-32 146.4 614 24.9
SGA_v2.0_scaffold1G00427 Striga asiatica HOM05D004682 ORTHO05D006197 1.3e-32 146.4 645 22.9
DCAR_018370 Daucus carota HOM05D004682 ORTHO05D006197 1.7e-32 146.0 638 23.8
CiPaw.07G098500 Carya illinoinensis HOM05D004682 ORTHO05D006197 2.2e-32 145.6 616 24.2
FAN27G0404 Fragaria x ananassa HOM05D004682 ORTHO05D006197 2.2e-32 145.6 618 24.8
FAN15G3206 Fragaria x ananassa HOM05D004682 ORTHO05D006197 2.9e-32 145.2 619 24.9
Glyma.03G207600 Glycine max HOM05D004682 ORTHO05D006197 2.9e-32 145.2 619 23.6
Oeu002696.1 Olea europaea HOM05D004682 ORTHO05D006197 2.9e-32 145.2 633 23.5
Phvul.001G201200 Phaseolus vulgaris HOM05D004682 ORTHO05D006197 3.8e-32 144.8 620 23.9
TAR633G2734 Trochodendron aralioides HOM05D004682 ORTHO05D006197 3.8e-32 144.8 626 24.3
Atru.chr5.1294 Acer truncatum HOM05D004682 ORTHO05D006197 8.4e-32 143.7 626 24.1
COL.COLO4_08044 Corchorus olitorius HOM05D004682 ORTHO05D006197 8.4e-32 143.7 337 28.2
Medtr7g107440 Medicago truncatula HOM05D004682 ORTHO05D006197 1.1e-31 143.3 597 23.8
Lalb_Chr20g0111011 Lupinus albus HOM05D004682 ORTHO05D006197 1.4e-31 142.9 619 22.9
Hma1.2p1_0399F.1_g144320 Hydrangea macrophylla HOM05D004682 ORTHO05D006197 1.9e-31 142.5 619 23.9
Hma1.2p1_1049F.1_g251880 Hydrangea macrophylla HOM05D004682 ORTHO05D006197 1.9e-31 142.5 619 23.9
QL12p023658 Quercus lobata HOM05D004682 ORTHO05D006197 1.9e-31 142.5 611 24.4
Cfa006055 Carpinus fangiana HOM05D003625 ORTHO05D006197 3.2e-31 141.7 615 24.7
Sed0020737 Sechium edule HOM05D004682 ORTHO05D006197 3.2e-31 141.7 614 23.8
arahy.Tifrunner.gnm1.ann1.BJ6WT1 Arachis hypogaea HOM05D004682 ORTHO05D006197 4.2e-31 141.4 624 23.2
VMungo1383G2773 Vigna mungo HOM05D004682 ORTHO05D006197 4.2e-31 141.4 619 23.4
TWI59G0906 Tripterygium wilfordii HOM05D004682 ORTHO05D006197 5.5e-31 141.0 489 26.0
AL7G17990 Arabidopsis lyrata HOM05D004682 ORTHO05D006197 7.2e-31 140.6 621 23.2
MSTRG.18200 Avicennia marina HOM05D004682 ORTHO05D006197 7.2e-31 140.6 623 23.3
Sc17g0003630 Simmondsia chinensis HOM05D004682 ORTHO05D006197 7.2e-31 140.6 656 24.5
CANSAT25G1381 Cannabis sativa HOM05D004682 ORTHO05D006197 1.2e-30 139.8 612 22.9
Ca_09103_v3 Cicer arietinum L. HOM05D004682 ORTHO05D006197 1.6e-30 139.4 618 22.7
CsaV3_1G038120 Cucumis sativus L. HOM05D004682 ORTHO05D006197 1.6e-30 139.4 618 24.1
Lj2A1184G69 Lonicera japonica HOM05D004682 ORTHO05D006197 1.6e-30 139.4 585 23.6
Nitab4.5_0000135g0040 Nicotiana tabacum HOM05D004682 ORTHO05D006197 1.6e-30 139.4 643 23.2
Os05g0188500 Oryza sativa ssp. japonica HOM05D004682 ORTHO05D006197 1.6e-30 139.4 557 23.9
TPR.G32282 Trifolium pratense HOM05D004682 ORTHO05D006197 1.6e-30 139.4 675 22.7
Lalb_Chr25g0287581 Lupinus albus HOM05D004682 ORTHO05D006197 2.7e-30 138.7 625 23.5
CAN.G13.21 Capsicum annuum HOM05D004682 ORTHO05D006197 3.5e-30 138.3 638 23.8
MELO3C015235.2 Cucumis melo HOM05D004682 ORTHO05D006197 3.5e-30 138.3 617 23.7
Lsat_1_v5_gn_9_5121 Lactuca sativa HOM05D004682 ORTHO05D006197 3.5e-30 138.3 616 24.2
GSVIVG01011020001 Vitis vinifera HOM05D004682 ORTHO05D006197 4.6e-30 137.9 612 24.0
AUR62026692 Chenopodium quinoa HOM05D004682 ORTHO05D006197 6.1e-30 137.5 629 23.5
FAN20G1430 Fragaria x ananassa HOM05D004682 ORTHO05D006197 6.1e-30 137.5 499 26.3
Hma1.2p1_0399F.1_g144310 Hydrangea macrophylla HOM05D004682 ORTHO05D006197 7.9e-30 137.1 333 29.4
Hma1.2p1_1049F.1_g251875 Hydrangea macrophylla HOM05D004682 ORTHO05D006197 7.9e-30 137.1 333 29.4
AUR62013599 Chenopodium quinoa HOM05D004682 ORTHO05D006197 1.0e-29 136.7 629 23.5
ECA247G2915 Erigeron canadensis HOM05D004682 ORTHO05D006197 1.0e-29 136.7 613 23.2
Nn3g21239 Nelumbo nucifera HOM05D004682 ORTHO05D006197 1.0e-29 136.7 622 23.8
Potri.002G230800 Populus trichocarpa HOM05D004682 ORTHO05D006197 1.0e-29 136.7 619 23.9
Sabra02G0176000 Salix brachista HOM05D004682 ORTHO05D006197 1.0e-29 136.7 636 23.7
Haze_04797 Corylus avellana HOM05D004682 ORTHO05D006197 1.3e-29 136.3 601 24.8
Psat3g025520 Pisum sativum HOM05D004682 ORTHO05D006197 1.3e-29 136.3 618 22.7
PGSC0003DMG401015901 Solanum tuberosum HOM05D004682 ORTHO05D006197 2.3e-29 135.6 628 23.4
Manes.01G212500 Manihot esculenta HOM05D004682 ORTHO05D006197 3.0e-29 135.2 634 23.8
Solyc05g026510.4 Solanum lycopersicum HOM05D004682 ORTHO05D006197 5.1e-29 134.4 628 23.2
Sopen05g022990 Solanum pennellii HOM05D004682 ORTHO05D006197 5.1e-29 134.4 628 23.2
Ah.05g167980 Amaranthus hybridus HOM05D004682 ORTHO05D006197 1.9e-28 132.5 635 23.1
Zm00001eb115650 Zea mays HOM05D004682 ORTHO05D006197 3.3e-28 131.7 612 22.5
EL10Ac1g01562 Beta vulgaris HOM05D004682 ORTHO05D006197 5.7e-28 131.0 497 25.4
Medtr1g048130 Medicago truncatula HOM05D004682 ORTHO05D006197 7.4e-28 130.6 472 24.6
SHI14494 Sapria himalayana HOM05D004682 ORTHO05D006197 7.4e-28 130.6 622 23.0
Medtr1g047970 Medicago truncatula HOM05D004682 ORTHO05D006197 2.2e-27 129.0 604 22.2
Peaxi162Scf00159g01650 Petunia axillaris HOM05D004682 ORTHO05D006197 2.8e-27 128.6 500 24.6
Hund18022 Selenicereus undatus HOM05D004682 ORTHO05D006197 6.3e-27 127.5 612 23.5
MCO01G509 Micromonas commoda HOM05D004682 ORTHO05D006197 1.8e-26 125.9 636 23.6
Nitab4.5_0000282g0030 Nicotiana tabacum HOM05D004682 ORTHO05D006197 4.1e-26 124.8 517 24.0
ClCG03G018080 Citrullus lanatus HOM05D004682 ORTHO05D006197 4.5e-25 121.3 301 28.2
Potri.014G151400 Populus trichocarpa HOM05D004682 ORTHO05D006197 1.4e-21 109.8 149 38.3
COL.COLO4_31667 Corchorus olitorius HOM05D004682 ORTHO05D006197 3.0e-21 108.6 638 22.4
HPP92_027340 Vanilla planifolia HOM05D004682 ORTHO05D006197 1.1e-18 100.1 616 21.6
Cre17.g736400 Chlamydomonas reinhardtii HOM05D004682 ORTHO05D006197 1.0e-13 83.6 387 23.8
Cpa.g.sc9.149 Carica papaya HOM05D004682 ORTHO05D006197 1.6e-09 69.7 218 25.2


User provided reference genes

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