Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa025945 Carpinus fangiana HOM05D000363 ORTHO05D121766 1.0e-279 966.1 483 100.0
CARHR290600 Cardamine hirsuta HOM05D000363 ORTHO05D000236 1.7e-08 65.1 192 25.0
Gorai.007G199500 Gossypium raimondii HOM05D000363 ORTHO05D000236 2.9e-08 64.3 128 33.6
Gohir.D11G187600 Gossypium hirsutum HOM05D000363 ORTHO05D000236 3.8e-08 63.9 128 33.6
Thhalv10025505m.g Eutrema salsugineum HOM05D000363 ORTHO05D000236 6.5e-08 63.2 148 28.4
Gohir.A11G181100 Gossypium hirsutum HOM05D000363 ORTHO05D000236 6.5e-08 63.2 128 32.8
Thhalv10025488m.g Eutrema salsugineum HOM05D000363 ORTHO05D000236 8.5e-08 62.8 148 27.7
Sabra07G0015900 Salix brachista HOM05D000363 ORTHO05D000236 1.4e-07 62.0 127 31.5
AL5G31420 Arabidopsis lyrata HOM05D000363 ORTHO05D000236 1.9e-07 61.6 113 32.7
THA.LOC104820289 Tarenaya hassleriana HOM05D000363 ORTHO05D000236 1.9e-07 61.6 144 26.4
AT3G51000 Arabidopsis thaliana HOM05D000363 ORTHO05D000236 2.5e-07 61.2 113 32.7
BolC8t48326H Brassica oleracea HOM05D000363 ORTHO05D000236 2.5e-07 61.2 157 26.8
COL.COLO4_21996 Corchorus olitorius HOM05D000363 ORTHO05D000236 2.5e-07 61.2 128 33.6
Duzib147G1666 Durio zibethinus HOM05D000363 ORTHO05D000236 2.5e-07 61.2 128 32.8
Aa31LG10G6190 Aethionema arabicum HOM05D000363 ORTHO05D000236 3.2e-07 60.8 145 26.2
BcaC06g33433 Brassica carinata HOM05D005296 ORTHO05D006452 3.2e-07 60.8 146 26.0
BcaC06g33434 Brassica carinata HOM05D000363 ORTHO05D000236 3.2e-07 60.8 146 26.0
BcaC07g37942 Brassica carinata HOM05D000363 ORTHO05D000236 3.2e-07 60.8 159 25.8
C07p47530 Brassica napus HOM05D000363 ORTHO05D000236 3.2e-07 60.8 146 26.0
BolC7t45280H Brassica oleracea HOM05D000363 ORTHO05D000236 3.2e-07 60.8 146 26.0
CARHR080030 Cardamine hirsuta HOM05D000363 ORTHO05D000236 4.2e-07 60.5 117 30.8
Sabra07G0016000 Salix brachista HOM05D000363 ORTHO05D000236 5.5e-07 60.1 127 31.5
Sabra07G0016100 Salix brachista HOM05D000363 ORTHO05D000236 5.5e-07 60.1 127 31.5
Mapoly0183s0012 Marchantia polymorpha HOM05D000363 ORTHO05D000236 7.2e-07 59.7 205 25.9
Zm00001eb127750 Zea mays HOM05D000363 ORTHO05D000236 7.2e-07 59.7 136 31.6
MSTRG.20405 Avicennia marina HOM05D000363 ORTHO05D000236 9.4e-07 59.3 113 30.1
C05p61570 Brassica napus HOM05D000363 ORTHO05D000236 9.4e-07 59.3 117 27.4
Gohir.D13G223300 Gossypium hirsutum HOM05D000363 ORTHO05D000236 9.4e-07 59.3 138 28.3
Sabra07G0016200 Salix brachista HOM05D000363 ORTHO05D000236 9.4e-07 59.3 134 30.6
Zm00001eb408720 Zea mays HOM05D000363 ORTHO05D000236 9.4e-07 59.3 158 27.2
AT3G05600 Arabidopsis thaliana HOM05D000363 ORTHO05D000236 1.2e-06 58.9 117 29.9
BraA05t22954Z Brassica rapa HOM05D000363 ORTHO05D000236 1.2e-06 58.9 117 28.2
BraA09t39869Z Brassica rapa HOM05D000363 ORTHO05D000236 1.2e-06 58.9 113 32.7
Carub.0005s1740 Capsella rubella HOM05D000363 ORTHO05D000236 1.2e-06 58.9 117 31.6
Carub.0007s2567 Capsella rubella HOM05D000363 ORTHO05D000236 1.2e-06 58.9 186 24.2
AL3G16230 Arabidopsis lyrata HOM05D000363 ORTHO05D000236 1.6e-06 58.5 133 27.8
A03p49500 Brassica napus HOM05D000363 ORTHO05D000236 1.6e-06 58.5 146 25.3
BolC5t34816H Brassica oleracea HOM05D000363 ORTHO05D000236 1.6e-06 58.5 117 27.4
BraA03t14049Z Brassica rapa HOM05D000363 ORTHO05D000236 1.6e-06 58.5 146 25.3
Carub.0003s0492 Capsella rubella HOM05D000363 ORTHO05D000236 1.6e-06 58.5 145 26.9
Cre01.g010550 Chlamydomonas reinhardtii HOM05D000363 ORTHO05D000236 1.6e-06 58.5 117 32.5
Sp7g14410 Schrenkiella parvula HOM05D000363 ORTHO05D000236 1.6e-06 58.5 148 27.0
Thecc.01G026800 Theobroma cacao HOM05D000363 ORTHO05D000236 1.6e-06 58.5 128 32.0
BolC7t45284H Brassica oleracea HOM05D000363 ORTHO05D000236 2.1e-06 58.2 145 27.6
BcaC06g33473 Brassica carinata HOM05D000363 ORTHO05D000236 2.7e-06 57.8 145 26.9
C07p47600 Brassica napus HOM05D000363 ORTHO05D000236 2.7e-06 57.8 145 26.9
Gorai.013G254400 Gossypium raimondii HOM05D000363 ORTHO05D000236 2.7e-06 57.8 138 27.5
Lj9A191T28 Lonicera japonica HOM05D000363 ORTHO05D000236 2.7e-06 57.8 138 29.7
Medtr7g113010 Medicago truncatula HOM05D000363 ORTHO05D000236 3.6e-06 57.4 134 25.4
Sp3g04480 Schrenkiella parvula HOM05D000363 ORTHO05D000236 3.6e-06 57.4 117 29.9
Ca_09345_v3 Cicer arietinum L. HOM05D000363 ORTHO05D000236 4.7e-06 57.0 149 25.5
Gohir.A13G219600 Gossypium hirsutum HOM05D000363 ORTHO05D000236 4.7e-06 57.0 106 31.1
Lj1g0021039 Lotus japonicus HOM05D000363 ORTHO05D000236 4.7e-06 57.0 135 28.1
MD15G1252000 Malus domestica HOM05D000363 ORTHO05D000236 4.7e-06 57.0 129 31.8
Manes.02G098700 Manihot esculenta HOM05D000363 ORTHO05D000236 4.7e-06 57.0 109 31.2
Sp7g14430 Schrenkiella parvula HOM05D000363 ORTHO05D000236 4.7e-06 57.0 145 25.5
TPR.G1641 Trifolium pratense HOM05D000363 ORTHO05D000236 4.7e-06 57.0 118 27.1
Aa31LG5G16020 Aethionema arabicum HOM05D000363 ORTHO05D000236 6.1e-06 56.6 145 25.5
AT4G15955 Arabidopsis thaliana HOM05D000363 ORTHO05D000236 6.1e-06 56.6 145 26.2
Carub.0003s0491 Capsella rubella HOM05D000363 ORTHO05D000236 6.1e-06 56.6 145 27.6
DCAR_029383 Daucus carota HOM05D000363 ORTHO05D000236 6.1e-06 56.6 116 27.6
Lj9A190T31 Lonicera japonica HOM05D000363 ORTHO05D000236 6.1e-06 56.6 138 29.0
Thecc.04G288400 Theobroma cacao HOM05D000363 ORTHO05D000236 6.1e-06 56.6 113 30.1
Atru.chr2.101 Acer truncatum HOM05D000363 ORTHO05D000236 7.9e-06 56.2 119 26.1
Glyma.16G132500 Glycine max HOM05D000363 ORTHO05D000236 7.9e-06 56.2 116 31.0
Lj9A185G9 Lonicera japonica HOM05D000363 ORTHO05D000236 7.9e-06 56.2 115 32.2
MD02G1138300 Malus domestica HOM05D000363 ORTHO05D000236 7.9e-06 56.2 129 31.0


User provided reference genes

Program Settings