Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa025908 Carpinus fangiana HOM05D005637 ORTHO05D006983 2.5e-66 255.4 134 100.0
Migut.I00202 Erythranthe guttata HOM05D005637 ORTHO05D006983 7.8e-12 74.3 149 38.3
Hma1.2p1_0060F.1_g033550 Hydrangea macrophylla HOM05D005637 ORTHO05D006983 1.3e-11 73.6 143 38.5
Pp3c26_7640 Physcomitrium patens HOM05D005637 ORTHO05D006983 3.0e-11 72.4 142 36.6
ECA247G3019 Erigeron canadensis HOM05D005637 ORTHO05D006983 5.1e-11 71.6 143 37.1
BcaB03g11995 Brassica carinata HOM05D005637 ORTHO05D006983 6.6e-11 71.2 140 35.7
CiPaw.11G046600 Carya illinoinensis HOM05D005637 ORTHO05D006983 1.1e-10 70.5 132 35.6
Gohir.A07G064200 Gossypium hirsutum HOM05D005637 ORTHO05D006983 1.5e-10 70.1 116 39.7
Potri.008G089900 Populus trichocarpa HOM05D005637 ORTHO05D006983 1.5e-10 70.1 116 36.2
Sabra08G0067300 Salix brachista HOM05D005637 ORTHO05D006983 1.5e-10 70.1 116 37.9
TWI75G0754 Tripterygium wilfordii HOM05D005637 ORTHO05D006983 2.5e-10 69.3 143 36.4
Ciclev10022740m.g Citrus clementina HOM05D005637 ORTHO05D006983 4.3e-10 68.6 146 36.3
Manes.14G080801 Manihot esculenta HOM05D005637 ORTHO05D006983 4.3e-10 68.6 142 35.2
Phvul.009G185800 Phaseolus vulgaris HOM05D005637 ORTHO05D006983 4.3e-10 68.6 114 36.8
SMO367G1093 Selaginella moellendorffii HOM05D005637 ORTHO05D006983 4.3e-10 68.6 113 35.4
TPR.G11903 Trifolium pratense HOM05D005637 ORTHO05D006983 4.3e-10 68.6 116 37.9
arahy.Tifrunner.gnm1.ann1.M53U4W Arachis hypogaea HOM05D005637 ORTHO05D006983 5.6e-10 68.2 114 37.7
Ca_14657_v3 Cicer arietinum L. HOM05D005637 ORTHO05D006983 7.3e-10 67.8 114 37.7
LjContig00102g0010410 Lotus japonicus HOM05D005637 ORTHO05D006983 7.3e-10 67.8 114 36.8
Nn2g15887 Nelumbo nucifera HOM05D005637 ORTHO05D006983 7.3e-10 67.8 116 36.2
Psat5g200400 Pisum sativum HOM05D005637 ORTHO05D006983 7.3e-10 67.8 115 36.5
Thecc.03G093000 Theobroma cacao HOM05D005637 ORTHO05D006983 7.3e-10 67.8 109 36.7
VMungo1309G0753 Vigna mungo HOM05D005637 ORTHO05D006983 9.6e-10 67.4 109 36.7
arahy.Tifrunner.gnm1.ann1.KT0WW2 Arachis hypogaea HOM05D005637 ORTHO05D006983 1.2e-09 67.0 114 37.7
COL.COLO4_36923 Corchorus olitorius HOM05D005637 ORTHO05D006983 1.2e-09 67.0 109 36.7
Glyma.06G195800 Glycine max HOM05D005637 ORTHO05D006983 1.2e-09 67.0 109 37.6
Lalb_Chr08g0235561 Lupinus albus HOM05D005637 ORTHO05D006983 1.2e-09 67.0 121 38.0
AagrBONN_evm.TU.Sc2ySwM_228.632 Anthoceros agrestis HOM05D005637 ORTHO05D006983 1.6e-09 66.6 109 36.7
Duzib068G0698 Durio zibethinus HOM05D005637 ORTHO05D006983 1.6e-09 66.6 109 36.7
Gohir.D07G069000 Gossypium hirsutum HOM05D005637 ORTHO05D006983 1.6e-09 66.6 109 37.6
Gorai.001G072500 Gossypium raimondii HOM05D005637 ORTHO05D006983 1.6e-09 66.6 109 37.6
MD00G1081600 Malus domestica HOM05D005637 ORTHO05D006983 1.6e-09 66.6 116 36.2
ATR0564G491 Amborella trichopoda HOM05D005637 ORTHO05D006983 2.1e-09 66.2 142 35.9
AagrBONN_evm.TU.Sc2ySwM_362.586 Anthoceros agrestis HOM05D005637 ORTHO05D006983 2.1e-09 66.2 109 36.7
CDE02G3019 Ceratophyllum demersum HOM05D005637 ORTHO05D006983 2.1e-09 66.2 143 34.3
Duzib205G1800 Durio zibethinus HOM05D005637 ORTHO05D006983 2.1e-09 66.2 109 36.7
Glyma.04G166700 Glycine max HOM05D005637 ORTHO05D006983 2.1e-09 66.2 109 36.7
Peaxi162Scf00106g00427 Petunia axillaris HOM05D005637 ORTHO05D006983 2.1e-09 66.2 142 37.3
Cpa.g.sc57.35 Carica papaya HOM05D005637 ORTHO05D006983 2.8e-09 65.9 147 34.0
CARHR025420 Cardamine hirsuta HOM05D005637 ORTHO05D006983 3.6e-09 65.5 139 34.5
THA.LOC104822041 Tarenaya hassleriana HOM05D005637 ORTHO05D006983 3.6e-09 65.5 109 36.7
Dinv10648 Davidia involucrata HOM05D005637 ORTHO05D006983 4.7e-09 65.1 148 34.5
Oeu052447.1 Olea europaea HOM05D005637 ORTHO05D006983 4.7e-09 65.1 109 36.7
QL10p017509 Quercus lobata HOM05D005637 ORTHO05D006983 4.7e-09 65.1 143 34.3
TAR496G0002 Trochodendron aralioides HOM05D005637 ORTHO05D006983 6.2e-09 64.7 154 36.4
TAR629G0341 Trochodendron aralioides HOM05D005637 ORTHO05D006983 6.2e-09 64.7 154 36.4
unitig_748.g7812 Utricularia gibba HOM05D005637 ORTHO05D006983 6.2e-09 64.7 109 36.7
Zm00001eb312430 Zea mays HOM05D005637 ORTHO05D006983 6.2e-09 64.7 115 37.4
A08p27370 Brassica napus HOM05D005637 ORTHO05D006983 8.1e-09 64.3 143 35.0
BraA08t34678Z Brassica rapa HOM05D005637 ORTHO05D006983 8.1e-09 64.3 143 35.0
PSO832G2445 Papaver somniferum HOM05D005637 ORTHO05D006983 8.1e-09 64.3 153 34.6
Rhsim08G0152700 Rhododendron simsii HOM05D005637 ORTHO05D006983 8.1e-09 64.3 109 35.8
Sp1g22230 Schrenkiella parvula HOM05D005637 ORTHO05D006983 1.1e-08 63.9 143 35.0
Actinidia04874 Actinidia chinensis HOM05D005637 ORTHO05D006983 1.4e-08 63.5 143 34.3
Cc00_g08390 Coffea canephora HOM05D005637 ORTHO05D006983 1.4e-08 63.5 142 35.9
Thhalv10009046m.g Eutrema salsugineum HOM05D005637 ORTHO05D006983 1.4e-08 63.5 141 33.3
Nitab4.5_0001195g0050 Nicotiana tabacum HOM05D005637 ORTHO05D006983 1.4e-08 63.5 109 36.7
Nitab4.5_0001997g0100 Nicotiana tabacum HOM05D005637 ORTHO05D006983 1.4e-08 63.5 109 36.7
GSVIVG01007979001 Vitis vinifera HOM05D005637 ORTHO05D006983 1.4e-08 63.5 144 34.0
CSS0030079 Camellia sinensis var. sinensis HOM05D005637 ORTHO05D006983 1.8e-08 63.2 142 36.6
FAN07G0507 Fragaria x ananassa HOM05D005637 ORTHO05D006983 1.8e-08 63.2 117 36.8
Prupe.1G278400 Prunus persica HOM05D005637 ORTHO05D006983 1.8e-08 63.2 143 35.0
CAN.G648.12 Capsicum annuum HOM05D005637 ORTHO05D006983 2.4e-08 62.8 150 34.0
AUR62008440 Chenopodium quinoa HOM05D005637 ORTHO05D006983 2.4e-08 62.8 142 35.9
LjContig00103g0026967 Lotus japonicus HOM05D005637 ORTHO05D006983 2.4e-08 62.8 100 38.0
Atru.chr9.197 Acer truncatum HOM05D005637 ORTHO05D006983 3.1e-08 62.4 100 37.0
C05p24490 Brassica napus HOM05D005637 ORTHO05D006983 3.1e-08 62.4 142 33.8
BolC5t31183H Brassica oleracea HOM05D005637 ORTHO05D006983 3.1e-08 62.4 142 33.8
SGA_v2.0_scaffold313G48341 Striga asiatica HOM05D005637 ORTHO05D006983 4.0e-08 62.0 103 35.9
AT1G26550 Arabidopsis thaliana HOM05D005637 ORTHO05D006983 5.2e-08 61.6 142 34.5
CANSAT80G1152 Cannabis sativa HOM05D005637 ORTHO05D006983 5.2e-08 61.6 147 33.3
AL1G39180 Arabidopsis lyrata HOM05D005637 ORTHO05D006983 6.8e-08 61.2 143 34.3
Carub.0001s2449 Capsella rubella HOM05D005637 ORTHO05D006983 6.8e-08 61.2 143 34.3
DCAR_026064 Daucus carota HOM05D005637 ORTHO05D006983 1.5e-07 60.1 142 32.4
Medtr3g037570 Medicago truncatula HOM05D005637 ORTHO05D006983 1.5e-07 60.1 143 33.6
Aqoxy3G03463 Aquilegia oxysepala HOM05D005637 ORTHO05D006983 2.0e-07 59.7 143 35.0
Eucgr.G02481 Eucalyptus grandis HOM05D005637 ORTHO05D006983 2.0e-07 59.7 142 34.5
RcHm_v2.0_Chr4g0439331 Rosa chinensis HOM05D005637 ORTHO05D006983 2.6e-07 59.3 142 33.1
A09p39930 Brassica napus HOM05D005637 ORTHO05D006983 3.4e-07 58.9 142 33.1
BraA09t39492Z Brassica rapa HOM05D005637 ORTHO05D006983 3.4e-07 58.9 142 33.1
FvH4_4g30970 Fragaria vesca HOM05D005637 ORTHO05D006983 9.9e-07 57.4 142 33.8
FAN17G1506 Fragaria x ananassa HOM05D005637 ORTHO05D006983 9.9e-07 57.4 142 33.8
FAN22G0476 Fragaria x ananassa HOM05D005637 ORTHO05D006983 9.9e-07 57.4 142 33.8
Mapoly0082s0039 Marchantia polymorpha HOM05D005637 ORTHO05D006983 9.9e-07 57.4 143 32.9
Os09g0411700 Oryza sativa ssp. japonica HOM05D005637 ORTHO05D006983 9.9e-07 57.4 142 30.3
FAN12G2219 Fragaria x ananassa HOM05D005637 ORTHO05D006983 1.3e-06 57.0 142 33.1
CANSAT80G0999 Cannabis sativa HOM05D005637 ORTHO05D006983 2.9e-06 55.8 157 30.6


User provided reference genes

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