Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa025826 Carpinus fangiana HOM05D005534 ORTHO05D006642 1.3e-307 1058.9 544 100.0
Pp3c3_32560 Physcomitrium patens HOM05D005534 ORTHO05D006642 1.1e-51 208.8 323 39.6
Peaxi162Scf00065g00017 Petunia axillaris HOM05D005534 ORTHO05D006642 4.1e-51 206.8 338 37.9
TPR.G25542 Trifolium pratense HOM05D005534 ORTHO05D006642 7.0e-51 206.1 318 40.3
Phvul.005G001600 Phaseolus vulgaris HOM05D005534 ORTHO05D006642 9.1e-51 205.7 326 38.3
CBR_g29440 Chara braunii HOM05D000921 ORTHO05D004153 2.7e-50 204.1 323 40.2
Medtr3g005730 Medicago truncatula HOM05D005534 ORTHO05D006642 4.5e-50 203.4 316 39.2
VMungo1080G0932 Vigna mungo HOM05D005534 ORTHO05D006642 4.5e-50 203.4 335 37.6
CDE02G4760 Ceratophyllum demersum HOM05D005534 ORTHO05D006642 7.7e-50 202.6 344 37.2
Nitab4.5_0000731g0130 Nicotiana tabacum HOM05D005534 ORTHO05D006642 1.3e-49 201.8 336 38.4
PGSC0003DMG401019416 Solanum tuberosum HOM05D005534 ORTHO05D006642 1.3e-49 201.8 346 38.2
Solyc10g012160.3 Solanum lycopersicum HOM05D005534 ORTHO05D006642 2.2e-49 201.1 346 38.2
CAN.G911.34 Capsicum annuum HOM05D005534 ORTHO05D006642 2.9e-49 200.7 336 38.4
Glyma.12G242500 Glycine max HOM05D005534 ORTHO05D006642 2.9e-49 200.7 319 38.9
ECA234G3974 Erigeron canadensis HOM05D005534 ORTHO05D006642 3.8e-49 200.3 336 39.0
Nitab4.5_0006008g0020 Nicotiana tabacum HOM05D005534 ORTHO05D006642 5.0e-49 199.9 338 37.9
Lsat_1_v5_gn_5_78481 Lactuca sativa HOM05D005534 ORTHO05D006642 6.5e-49 199.5 317 39.1
Potri.013G101700 Populus trichocarpa HOM05D005534 ORTHO05D006642 6.5e-49 199.5 326 37.4
MSTRG.6297 Avicennia marina HOM05D005534 ORTHO05D006642 8.5e-49 199.1 340 37.6
ClCG08G000650 Citrullus lanatus HOM05D005534 ORTHO05D006642 8.5e-49 199.1 315 38.7
THA.LOC104800087 Tarenaya hassleriana HOM05D005534 ORTHO05D006642 8.5e-49 199.1 325 38.5
Lalb_Chr07g0177551 Lupinus albus HOM05D005534 ORTHO05D006642 1.9e-48 198.0 322 38.5
Sopen10g005920 Solanum pennellii HOM05D005534 ORTHO05D006642 2.5e-48 197.6 346 38.2
Aqoxy2G03821 Aquilegia oxysepala HOM05D005534 ORTHO05D006642 4.2e-48 196.8 322 37.6
Cc00_g25290 Coffea canephora HOM05D005534 ORTHO05D006642 5.5e-48 196.4 328 36.6
Glyma.04G257200 Glycine max HOM05D005534 ORTHO05D006642 5.5e-48 196.4 319 38.2
MD04G1240000 Malus domestica HOM05D005534 ORTHO05D006642 5.5e-48 196.4 323 38.7
CsaV3_5G040210 Cucumis sativus L. HOM05D005534 ORTHO05D006642 7.2e-48 196.1 318 38.1
Nn1g07947 Nelumbo nucifera HOM05D005534 ORTHO05D006642 1.2e-47 195.3 336 36.9
Haze_13929 Corylus avellana HOM05D005534 ORTHO05D006642 1.6e-47 194.9 332 37.3
PSO017G6214 Papaver somniferum HOM05D005534 ORTHO05D006642 1.6e-47 194.9 351 35.6
Actinidia23022 Actinidia chinensis HOM05D005534 ORTHO05D006642 2.7e-47 194.1 325 36.6
TAR381G0138 Trochodendron aralioides HOM05D005534 ORTHO05D006642 2.7e-47 194.1 321 38.0
Prupe.1G530500 Prunus persica HOM05D005534 ORTHO05D006642 3.6e-47 193.7 312 38.8
CiPaw.04G011000 Carya illinoinensis HOM05D005534 ORTHO05D006642 4.7e-47 193.4 321 37.4
Ciclev10020832m.g Citrus clementina HOM05D005534 ORTHO05D006642 4.7e-47 193.4 323 37.8
Manes.18G119700 Manihot esculenta HOM05D005534 ORTHO05D006642 4.7e-47 193.4 321 38.3
GSVIVG01036434001 Vitis vinifera HOM05D005534 ORTHO05D006642 6.1e-47 193.0 325 36.9
Atru.chr13.2420 Acer truncatum HOM05D005534 ORTHO05D006642 8.0e-47 192.6 324 38.6
BcaNung06107 Brassica carinata HOM05D005534 ORTHO05D006642 8.0e-47 192.6 325 36.3
Duzib177G1179 Durio zibethinus HOM05D005534 ORTHO05D006642 8.0e-47 192.6 326 38.0
Mapoly0125s0040 Marchantia polymorpha HOM05D005534 ORTHO05D006642 1.0e-46 192.2 319 36.7
Rhsim12G0004300 Rhododendron simsii HOM05D005534 ORTHO05D006642 1.0e-46 192.2 315 37.5
AUR62026718 Chenopodium quinoa HOM05D005534 ORTHO05D006642 1.4e-46 191.8 338 37.0
Thecc.08G173200 Theobroma cacao HOM05D005534 ORTHO05D006642 1.8e-46 191.4 328 36.9
TWI18G0032 Tripterygium wilfordii HOM05D005534 ORTHO05D006642 2.3e-46 191.0 331 35.6
arahy.Tifrunner.gnm1.ann1.H1ATJ8 Arachis hypogaea HOM05D005534 ORTHO05D006642 5.2e-46 189.9 318 37.1
BcaNung06443 Brassica carinata HOM05D005534 ORTHO05D006642 5.2e-46 189.9 320 36.6
QL09p004039 Quercus lobata HOM05D005534 ORTHO05D006642 8.8e-46 189.1 323 35.9
Thhalv10007396m.g Eutrema salsugineum HOM05D005534 ORTHO05D006642 1.2e-45 188.7 320 36.9
Sp1g20290 Schrenkiella parvula HOM05D005534 ORTHO05D006642 1.2e-45 188.7 321 36.4
HPP92_005621 Vanilla planifolia HOM05D005534 ORTHO05D006642 1.2e-45 188.7 318 35.8
Zm00001eb411080 Zea mays HOM05D005534 ORTHO05D006642 1.2e-45 188.7 323 36.2
MD15G1399100 Malus domestica HOM05D005534 ORTHO05D006642 1.5e-45 188.3 319 37.9
Duzib177G1161 Durio zibethinus HOM05D005534 ORTHO05D006642 2.0e-45 188.0 327 37.9
RcHm_v2.0_Chr7g0231231 Rosa chinensis HOM05D005534 ORTHO05D006642 2.0e-45 188.0 317 38.5
vmacro00924 Vaccinium macrocarpon HOM05D005534 ORTHO05D006642 2.0e-45 188.0 304 37.8
Migut.J01545 Erythranthe guttata HOM05D005534 ORTHO05D006642 2.6e-45 187.6 318 36.5
Gohir.D13G120700 Gossypium hirsutum HOM05D005534 ORTHO05D006642 2.6e-45 187.6 319 36.4
MD08G1215200 Malus domestica HOM05D005534 ORTHO05D006642 2.6e-45 187.6 319 38.9
A09p41950 Brassica napus HOM05D005534 ORTHO05D006642 3.4e-45 187.2 329 35.3
Carub.0001s2231 Capsella rubella HOM05D005534 ORTHO05D006642 3.4e-45 187.2 318 36.2
Eucgr.F04073 Eucalyptus grandis HOM05D005534 ORTHO05D006642 4.4e-45 186.8 331 36.0
Lj3g0019199 Lotus japonicus HOM05D005534 ORTHO05D006642 4.4e-45 186.8 321 37.7
FvH4_5g33060 Fragaria vesca HOM05D005534 ORTHO05D006642 5.7e-45 186.4 211 46.4
Sc19g0002770 Simmondsia chinensis HOM05D005534 ORTHO05D006642 5.7e-45 186.4 312 36.9
unitig_899.g15650 Utricularia gibba HOM05D005534 ORTHO05D006642 5.7e-45 186.4 206 46.1
CSS0044704 Camellia sinensis var. sinensis HOM05D005534 ORTHO05D006642 7.5e-45 186.0 325 37.8
MBI06_g06677_MAGBIO Magnolia biondii HOM05D005534 ORTHO05D006642 9.8e-45 185.7 276 38.4
AL1G36350 Arabidopsis lyrata HOM05D005534 ORTHO05D006642 1.3e-44 185.3 320 36.2
BolC5t30885H Brassica oleracea HOM05D005534 ORTHO05D006642 1.3e-44 185.3 325 35.4
CARHR023160 Cardamine hirsuta HOM05D005534 ORTHO05D006642 1.7e-44 184.9 320 36.2
HPP92_005624 Vanilla planifolia HOM05D005534 ORTHO05D006642 2.8e-44 184.1 193 46.1
AT1G22800 Arabidopsis thaliana HOM05D005534 ORTHO05D006642 1.1e-43 182.2 315 35.9
QL09p002970 Quercus lobata HOM05D005534 ORTHO05D006642 1.1e-43 182.2 309 35.9
SalBow6G6434 Salvia bowleyana HOM05D005534 ORTHO05D006642 1.4e-43 181.8 364 33.5
Sabra13G0088100 Salix brachista HOM05D005534 ORTHO05D006642 3.1e-43 180.6 220 44.5
SMO232G0033 Selaginella moellendorffii HOM05D005534 ORTHO05D006642 3.1e-43 180.6 312 34.6
PGR044G1073 Punica granatum HOM05D005534 ORTHO05D006642 2.0e-42 177.9 365 32.6
Hund26700 Selenicereus undatus HOM05D005534 ORTHO05D006642 2.0e-42 177.9 316 35.8
EL10Ac1g01529 Beta vulgaris HOM05D005534 ORTHO05D006642 1.0e-41 175.6 316 36.7
BraA09t39683Z Brassica rapa HOM05D005534 ORTHO05D006642 1.0e-41 175.6 339 34.2
Psat1g000160 Pisum sativum HOM05D005534 ORTHO05D006642 1.3e-41 175.3 316 36.7
Gorai.013G134900 Gossypium raimondii HOM05D005534 ORTHO05D006642 5.0e-41 173.3 346 33.5
COL.COLO4_05589 Corchorus olitorius HOM05D005534 ORTHO05D006642 2.5e-40 171.0 329 34.7
Dinv18373 Davidia involucrata HOM05D005534 ORTHO05D006642 1.6e-39 168.3 372 32.0
SGA_v2.0_scaffold69G23189 Striga asiatica HOM05D005534 ORTHO05D006642 2.8e-39 167.5 249 38.2
Ca_13980_v3 Cicer arietinum L. HOM05D005534 ORTHO05D006642 8.0e-39 166.0 288 38.2
arahy.Tifrunner.gnm1.ann1.A8RPUL Arachis hypogaea HOM05D005534 ORTHO05D006642 1.0e-38 165.6 366 32.0
Oeu034751.1 Olea europaea HOM05D005534 ORTHO05D006642 1.0e-38 165.6 381 31.5
Oeu034752.2 Olea europaea HOM05D005534 ORTHO05D006642 1.0e-38 165.6 381 31.5
DCAR_022334 Daucus carota HOM05D005534 ORTHO05D006642 3.0e-38 164.1 307 33.9
PSO170G0367 Papaver somniferum HOM05D005534 ORTHO05D006642 1.2e-37 162.2 323 34.1
Lj1A290T42 Lonicera japonica HOM05D005534 ORTHO05D006642 1.3e-36 158.7 208 41.8
Aa31LG7G6790 Aethionema arabicum HOM05D005534 ORTHO05D006642 1.7e-36 158.3 343 33.8
AUR62013571 Chenopodium quinoa HOM05D005534 ORTHO05D006642 3.7e-36 157.1 235 38.7
Gohir.A13G117400 Gossypium hirsutum HOM05D005534 ORTHO05D006642 4.9e-36 156.8 295 35.9
SHI08987 Sapria himalayana HOM05D005534 ORTHO05D006642 4.9e-36 156.8 240 38.8
PRCOL_00005850 Prasinoderma coloniale HOM05D005534 ORTHO05D006642 1.4e-35 155.2 307 33.9
Cre13.g584750 Chlamydomonas reinhardtii HOM05D005534 ORTHO05D006642 3.2e-35 154.1 387 31.0
HPP92_005612 Vanilla planifolia HOM05D005534 ORTHO05D006642 4.6e-34 150.2 163 45.4
C05p21900 Brassica napus HOM05D005534 ORTHO05D006642 7.8e-34 149.4 264 36.7
MELO3C022197.2 Cucumis melo HOM05D005534 ORTHO05D006642 1.0e-33 149.1 332 32.2
vmacro22753 Vaccinium macrocarpon HOM05D005534 ORTHO05D006642 1.5e-32 145.2 156 46.8
Gohir.A13G117500 Gossypium hirsutum HOM05D005534 ORTHO05D006642 4.0e-30 137.1 151 48.3
AagrBONN_evm.TU.Sc2ySwM_117.1319 Anthoceros agrestis HOM05D005534 ORTHO05D006642 1.5e-29 135.2 264 38.3
FAN18G2794 Fragaria x ananassa HOM05D005534 ORTHO05D006642 6.4e-28 129.8 144 47.2
ATR0681G326 Amborella trichopoda HOM05D005534 ORTHO05D006642 8.3e-28 129.4 238 37.0
Sed0013677 Sechium edule HOM05D005534 ORTHO05D006642 3.2e-27 127.5 244 36.1
CANSAT25G1380 Cannabis sativa HOM05D005534 ORTHO05D006642 3.5e-26 124.0 127 49.6
Lj1A297T60 Lonicera japonica HOM05D005534 ORTHO05D006642 8.1e-23 112.8 158 40.5
Potri.013G101900 Populus trichocarpa HOM05D005534 ORTHO05D006642 8.9e-22 109.4 211 36.5
Cpa.g.sc438.5 Carica papaya HOM05D005534 ORTHO05D006642 1.7e-20 105.1 157 39.5
TPR.G30718 Trifolium pratense HOM05D005534 ORTHO05D006642 2.9e-20 104.4 244 31.1
Hma1.2p1_0708F.1_g207140 Hydrangea macrophylla HOM05D005534 ORTHO05D006642 1.9e-19 101.7 112 45.5
C07p20870 Brassica napus HOM05D005534 ORTHO05D006642 5.4e-19 100.1 137 40.9
BolC7t42620H Brassica oleracea HOM05D005534 ORTHO05D006642 5.4e-19 100.1 137 40.9
BcaC06g34996 Brassica carinata HOM05D005534 ORTHO05D006642 3.3e-16 90.9 125 39.2
Hma1.2p1_0708F.1_g207130 Hydrangea macrophylla HOM05D005534 ORTHO05D006642 6.2e-15 86.7 118 41.5
SEGI_21404 Sequoiadendron giganteum HOM05D005534 ORTHO05D006642 8.1e-15 86.3 82 46.3
CSS0018807 Camellia sinensis var. sinensis HOM05D005534 ORTHO05D006642 5.2e-14 83.6 124 38.7
MCO12G480 Micromonas commoda HOM05D005534 ORTHO05D006642 2.0e-13 81.6 105 38.1
CSS0033231 Camellia sinensis var. sinensis HOM05D005534 ORTHO05D006642 2.6e-13 81.3 114 41.2
A07p14190 Brassica napus HOM05D005534 ORTHO05D006642 4.4e-13 80.5 143 37.1
Lj1A297G57 Lonicera japonica HOM05D005534 ORTHO05D006642 7.1e-11 73.2 86 41.9
Zm00001eb320410 Zea mays HOM05D005534 ORTHO05D006642 1.4e-06 58.9 60 45.0


User provided reference genes

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