Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa025806 Carpinus fangiana HOM05D005879 ORTHO05D123935 0.0e+00 1290.4 659 100.0
Mapoly0002s0046 Marchantia polymorpha HOM05D005879 ORTHO05D007432 9.2e-13 79.7 334 24.6
Eucgr.B03900 Eucalyptus grandis HOM05D005879 ORTHO05D007432 1.0e-11 76.3 318 26.1
Aa31LG6G15340 Aethionema arabicum HOM05D005879 ORTHO05D007432 1.5e-10 72.4 121 32.2
CARHR246770 Cardamine hirsuta HOM05D005879 ORTHO05D007432 4.3e-10 70.9 121 32.2
Pp3c13_2250 Physcomitrium patens HOM05D005879 ORTHO05D007432 4.3e-10 70.9 119 31.9
Carub.0007s0187 Capsella rubella HOM05D005879 ORTHO05D007432 1.2e-09 69.3 121 31.4
Thhalv10025595m.g Eutrema salsugineum HOM05D005879 ORTHO05D007432 1.2e-09 69.3 122 32.0
MBI05_g37046_MAGBIO Magnolia biondii HOM05D005879 ORTHO05D007432 1.2e-09 69.3 324 22.8
Sp7g35960 Schrenkiella parvula HOM05D005879 ORTHO05D007432 2.1e-09 68.6 129 30.2
AL7G12180 Arabidopsis lyrata HOM05D005879 ORTHO05D007432 2.8e-09 68.2 114 31.6
BolC7t46692H Brassica oleracea HOM05D005879 ORTHO05D007432 3.6e-09 67.8 406 21.9
C07p62780 Brassica napus HOM05D005879 ORTHO05D007432 6.1e-09 67.0 357 22.7
Potri.005G074700 Populus trichocarpa HOM05D005879 ORTHO05D007432 1.0e-08 66.2 114 30.7
ATR0584G053 Amborella trichopoda HOM05D005879 ORTHO05D007432 1.4e-08 65.9 356 20.5
AT4G39920 Arabidopsis thaliana HOM05D005879 ORTHO05D007432 1.4e-08 65.9 114 30.7
Zm00001eb243870 Zea mays HOM05D005879 ORTHO05D007432 1.4e-08 65.9 123 30.1
Cc07_g15080 Coffea canephora HOM05D005879 ORTHO05D007432 1.8e-08 65.5 385 22.6
AagrBONN_evm.TU.Sc2ySwM_117.1918 Anthoceros agrestis HOM05D005879 ORTHO05D007432 2.3e-08 65.1 325 23.1
BraA03t15633Z Brassica rapa HOM05D005879 ORTHO05D007432 2.3e-08 65.1 403 21.6
HanXRQChr17g0554861 Helianthus annuus HOM05D005879 ORTHO05D007432 2.3e-08 65.1 117 31.6
TWI77G0137 Tripterygium wilfordii HOM05D005879 ORTHO05D007432 3.0e-08 64.7 121 30.6
A03p65800 Brassica napus HOM05D005879 ORTHO05D007432 4.0e-08 64.3 403 21.6
PSO801G0022 Papaver somniferum HOM05D005879 ORTHO05D007432 4.0e-08 64.3 121 28.9
vmacro12962 Vaccinium macrocarpon HOM05D005879 ORTHO05D007432 4.0e-08 64.3 328 23.8
Sabra05G0061500 Salix brachista HOM05D005879 ORTHO05D007432 5.2e-08 63.9 110 30.9
SEGI_25682 Sequoiadendron giganteum HOM05D005879 ORTHO05D007432 5.2e-08 63.9 110 30.0
Ah.11g050680 Amaranthus hybridus HOM05D005879 ORTHO05D007432 6.8e-08 63.5 151 28.5
Nitab4.5_0009581g0010 Nicotiana tabacum HOM05D005879 ORTHO05D007432 6.8e-08 63.5 110 30.0
PSO339G2019 Papaver somniferum HOM05D005879 ORTHO05D007432 6.8e-08 63.5 121 28.9
Cre03.g200150 Chlamydomonas reinhardtii HOM05D005879 ORTHO05D007432 8.9e-08 63.2 405 22.5
CAN.G151.26 Capsicum annuum HOM05D005879 ORTHO05D007432 1.2e-07 62.8 110 30.0
MELO3C017607.2 Cucumis melo HOM05D005879 ORTHO05D007432 1.2e-07 62.8 110 30.9
Lsat_1_v5_gn_8_137181 Lactuca sativa HOM05D005879 ORTHO05D007432 1.2e-07 62.8 117 31.6
Manes.12G134100 Manihot esculenta HOM05D005879 ORTHO05D007432 1.2e-07 62.8 115 28.7
Nn2g14007 Nelumbo nucifera HOM05D005879 ORTHO05D007432 1.2e-07 62.8 382 22.8
ECA233G0618 Erigeron canadensis HOM05D005879 ORTHO05D007432 1.5e-07 62.4 165 29.1
THA.LOC104807688 Tarenaya hassleriana HOM05D005879 ORTHO05D007432 1.5e-07 62.4 118 28.8
vmacro17311 Vaccinium macrocarpon HOM05D005879 ORTHO05D007432 1.5e-07 62.4 122 29.5
AUR62028624 Chenopodium quinoa HOM05D005879 ORTHO05D007432 2.0e-07 62.0 151 27.2
Glyma.08G134800 Glycine max HOM05D005879 ORTHO05D007432 2.6e-07 61.6 115 28.7
Oeu032409.1 Olea europaea HOM05D005879 ORTHO05D007432 2.6e-07 61.6 115 30.4
Aqoxy3G00238 Aquilegia oxysepala HOM05D005879 ORTHO05D007432 3.4e-07 61.2 152 29.6
AUR62008049 Chenopodium quinoa HOM05D005879 ORTHO05D007432 3.4e-07 61.2 110 30.0
Medtr8g090180 Medicago truncatula HOM05D005879 ORTHO05D007432 3.4e-07 61.2 118 28.8
PGSC0003DMG400027189 Solanum tuberosum HOM05D005879 ORTHO05D007432 3.4e-07 61.2 110 30.0
CsaV3_4G004590 Cucumis sativus L. HOM05D005879 ORTHO05D007432 4.4e-07 60.8 110 30.0
CsaV3_UNG120970 Cucumis sativus L. HOM05D005879 ORTHO05D007432 4.4e-07 60.8 110 30.0
CsaV3_UNG160200 Cucumis sativus L. HOM05D005879 ORTHO05D007432 4.4e-07 60.8 110 30.0
CsaV3_UNG223580 Cucumis sativus L. HOM05D005879 ORTHO05D007432 4.4e-07 60.8 110 30.0
Solyc05g052840.1 Solanum lycopersicum HOM05D005879 ORTHO05D007432 4.4e-07 60.8 110 30.0
Sopen05g031350 Solanum pennellii HOM05D005879 ORTHO05D007432 4.4e-07 60.8 110 30.0
EL10Ac5g10569 Beta vulgaris HOM05D005879 ORTHO05D007432 5.7e-07 60.5 110 30.0
PGR102G2441 Punica granatum HOM05D005879 ORTHO05D007432 5.7e-07 60.5 151 27.2
QL06p049237 Quercus lobata HOM05D005879 ORTHO05D007432 5.7e-07 60.5 316 22.2
Ca_17743_v3 Cicer arietinum L. HOM05D005879 ORTHO05D007432 7.5e-07 60.1 110 27.3
Ciclev10020973m.g Citrus clementina HOM05D005879 ORTHO05D007432 7.5e-07 60.1 122 26.2
Glyma.05G177800 Glycine max HOM05D005879 ORTHO05D007432 7.5e-07 60.1 115 29.6
Prupe.6G188100 Prunus persica HOM05D005879 ORTHO05D007432 7.5e-07 60.1 110 31.8
CiPaw.03G142700 Carya illinoinensis HOM05D005879 ORTHO05D007432 9.8e-07 59.7 382 23.8
Migut.L00135 Erythranthe guttata HOM05D005879 ORTHO05D007432 9.8e-07 59.7 110 30.0
PSO170G2230 Papaver somniferum HOM05D005879 ORTHO05D007432 9.8e-07 59.7 113 31.0
MD05G1043000 Malus domestica HOM05D005879 ORTHO05D007432 1.3e-06 59.3 110 29.1
TAR381G0927 Trochodendron aralioides HOM05D005879 ORTHO05D007432 1.3e-06 59.3 123 28.5
DCAR_003483 Daucus carota HOM05D005879 ORTHO05D007432 1.7e-06 58.9 110 27.3
Os02g0557000 Oryza sativa ssp. japonica HOM05D005879 ORTHO05D007432 1.7e-06 58.9 117 27.4
Peaxi162Scf00054g00186 Petunia axillaris HOM05D005879 ORTHO05D007432 1.7e-06 58.9 110 29.1
RcHm_v2.0_Chr2g0113151 Rosa chinensis HOM05D005879 ORTHO05D007432 1.7e-06 58.9 110 28.2
Phvul.002G256800 Phaseolus vulgaris HOM05D005879 ORTHO05D007432 2.2e-06 58.5 115 28.7
Sc05g0001510 Simmondsia chinensis HOM05D005879 ORTHO05D007432 2.2e-06 58.5 154 28.6
unitig_32.g10701 Utricularia gibba HOM05D005879 ORTHO05D007432 2.2e-06 58.5 117 29.9
FvH4_1g20700 Fragaria vesca HOM05D005879 ORTHO05D007432 2.9e-06 58.2 110 28.2
FAN23G0004 Fragaria x ananassa HOM05D005879 ORTHO05D007432 3.7e-06 57.8 110 28.2
FAN26G1261 Fragaria x ananassa HOM05D005879 ORTHO05D007432 4.9e-06 57.4 110 29.1
CDE04G0616 Ceratophyllum demersum HOM05D005879 ORTHO05D007432 6.4e-06 57.0 114 29.8
SMO143G0283 Selaginella moellendorffii HOM05D005879 ORTHO05D007432 6.4e-06 57.0 158 25.9
Lalb_Chr06g0163471 Lupinus albus HOM05D005879 ORTHO05D007432 8.3e-06 56.6 110 29.1
Rhsim01G0133800 Rhododendron simsii HOM05D005879 ORTHO05D007432 8.3e-06 56.6 317 23.7
RhsimUnG0233600 Rhododendron simsii HOM05D005879 ORTHO05D007432 8.3e-06 56.6 317 23.7


User provided reference genes

Program Settings