Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa025745 Carpinus fangiana HOM05D003871 ORTHO05D004621 4.1e-276 954.1 497 100.0
TPR.G17571 Trifolium pratense HOM05D003871 ORTHO05D004621 5.4e-58 229.6 453 34.0
Os03g0116500 Oryza sativa ssp. japonica HOM05D003871 ORTHO05D004621 7.0e-58 229.2 455 33.6
HanXRQChr16g0523641 Helianthus annuus HOM05D003871 ORTHO05D004621 1.2e-57 228.4 452 33.8
TAR374G1595 Trochodendron aralioides HOM05D003871 ORTHO05D004621 2.0e-57 227.6 451 33.9
CDE11G1114 Ceratophyllum demersum HOM05D003871 ORTHO05D004621 7.8e-57 225.7 451 33.5
Lj3g0009639 Lotus japonicus HOM05D003871 ORTHO05D004621 7.8e-57 225.7 451 33.9
CANSAT56G3752 Cannabis sativa HOM05D003871 ORTHO05D004621 1.3e-56 224.9 457 33.0
CDE02G2895 Ceratophyllum demersum HOM05D003871 ORTHO05D004621 1.3e-56 224.9 479 32.6
Ca_23740_v3 Cicer arietinum L. HOM05D003871 ORTHO05D004621 1.3e-56 224.9 446 34.3
VMungo0331G1218 Vigna mungo HOM05D003871 ORTHO05D004621 1.7e-56 224.6 447 34.5
Glyma.03G016800 Glycine max HOM05D003871 ORTHO05D004621 3.0e-56 223.8 447 34.5
Phvul.010G090500 Phaseolus vulgaris HOM05D003871 ORTHO05D004621 3.0e-56 223.8 447 34.0
PRCOL_00001778 Prasinoderma coloniale HOM05D003871 ORTHO05D004621 3.9e-56 223.4 434 35.9
COL.COLO4_12614 Corchorus olitorius HOM05D003871 ORTHO05D004621 5.0e-56 223.0 451 33.3
Carub.0005s2779 Capsella rubella HOM05D003871 ORTHO05D004621 6.6e-56 222.6 454 33.7
Psat4g151960 Pisum sativum HOM05D003871 ORTHO05D004621 6.6e-56 222.6 452 33.4
Medtr8g432630 Medicago truncatula HOM05D003871 ORTHO05D004621 8.6e-56 222.2 453 33.6
unitig_22.g5361 Utricularia gibba HOM05D003871 ORTHO05D004621 8.6e-56 222.2 453 33.8
Zm00001eb001110 Zea mays HOM05D003871 ORTHO05D004621 8.6e-56 222.2 438 34.2
Aqoxy7G00418 Aquilegia oxysepala HOM05D003871 ORTHO05D004621 1.1e-55 221.9 453 33.6
BcaB02g07388 Brassica carinata HOM05D003871 ORTHO05D004621 1.1e-55 221.9 452 32.5
BcaC08g45104 Brassica carinata HOM05D003871 ORTHO05D004621 1.1e-55 221.9 452 32.5
MD07G1127800 Malus domestica HOM05D003871 ORTHO05D004621 1.1e-55 221.9 451 33.5
AL5G43380 Arabidopsis lyrata HOM05D003871 ORTHO05D004621 1.5e-55 221.5 452 32.5
MSTRG.4874 Avicennia marina HOM05D003871 ORTHO05D004621 1.5e-55 221.5 451 34.4
arahy.Tifrunner.gnm1.ann1.AB99XC Arachis hypogaea HOM05D003871 ORTHO05D004621 1.9e-55 221.1 453 33.6
BcaC07g40617 Brassica carinata HOM05D003871 ORTHO05D004621 1.9e-55 221.1 452 33.2
BcaC07g42655 Brassica carinata HOM05D003871 ORTHO05D004621 1.9e-55 221.1 452 32.7
THA.LOC104802015 Tarenaya hassleriana HOM05D003871 ORTHO05D004621 1.9e-55 221.1 452 32.7
Migut.B01700 Erythranthe guttata HOM05D003871 ORTHO05D004621 2.5e-55 220.7 450 34.0
QL08p050260 Quercus lobata HOM05D003871 ORTHO05D004621 2.5e-55 220.7 454 33.0
Duzib138G1891 Durio zibethinus HOM05D003871 ORTHO05D004621 3.3e-55 220.3 450 33.1
Glyma.07G077100 Glycine max HOM05D003871 ORTHO05D004621 3.3e-55 220.3 447 33.8
Thhalv10005978m.g Eutrema salsugineum HOM05D003871 ORTHO05D004621 4.3e-55 219.9 452 32.7
FvH4_7g13330 Fragaria vesca HOM05D003871 ORTHO05D004621 4.3e-55 219.9 455 33.2
Prupe.2G156700 Prunus persica HOM05D003871 ORTHO05D004621 4.3e-55 219.9 453 32.2
AT3G61140 Arabidopsis thaliana HOM05D003871 ORTHO05D004621 5.6e-55 219.5 452 31.9
CARHR171420 Cardamine hirsuta HOM05D003871 ORTHO05D004621 5.6e-55 219.5 452 32.3
Dinv43765 Davidia involucrata HOM05D003871 ORTHO05D004621 5.6e-55 219.5 453 32.7
HanXRQChr17g0560011 Helianthus annuus HOM05D003871 ORTHO05D004621 5.6e-55 219.5 449 33.6
HPP92_007366 Vanilla planifolia HOM05D003871 ORTHO05D004621 5.6e-55 219.5 443 33.9
Sp5g02240 Schrenkiella parvula HOM05D003871 ORTHO05D004621 7.3e-55 219.2 452 32.7
Sc23g0003210 Simmondsia chinensis HOM05D003871 ORTHO05D004621 7.3e-55 219.2 443 34.3
Ciclev10020177m.g Citrus clementina HOM05D003871 ORTHO05D004621 9.5e-55 218.8 451 33.3
Thecc.01G366900 Theobroma cacao HOM05D003871 ORTHO05D004621 9.5e-55 218.8 451 33.7
arahy.Tifrunner.gnm1.ann1.6U8ZH2 Arachis hypogaea HOM05D003871 ORTHO05D004621 1.2e-54 218.4 449 33.9
A09p53200 Brassica napus HOM05D003871 ORTHO05D004621 1.6e-54 218.0 455 33.0
Sopen01g037420 Solanum pennellii HOM05D003871 ORTHO05D004621 1.6e-54 218.0 439 34.6
Manes.05G039500 Manihot esculenta HOM05D003871 ORTHO05D004621 2.1e-54 217.6 451 33.3
PSO478G4452 Papaver somniferum HOM05D003871 ORTHO05D004621 2.1e-54 217.6 442 33.9
Solyc01g091650.3 Solanum lycopersicum HOM05D003871 ORTHO05D004621 2.1e-54 217.6 439 34.9
Atru.chr5.417 Acer truncatum HOM05D003871 ORTHO05D004621 2.8e-54 217.2 441 33.1
C08p35990 Brassica napus HOM05D003871 ORTHO05D004621 2.8e-54 217.2 454 32.8
BolC8t51181H Brassica oleracea HOM05D003871 ORTHO05D004621 2.8e-54 217.2 454 32.8
AUR62004300 Chenopodium quinoa HOM05D003871 ORTHO05D004621 2.8e-54 217.2 451 33.3
Gohir.D11G089800 Gossypium hirsutum HOM05D003871 ORTHO05D004621 2.8e-54 217.2 451 33.0
Potri.002G154500 Populus trichocarpa HOM05D003871 ORTHO05D004621 2.8e-54 217.2 454 33.3
Lalb_Chr17g0339991 Lupinus albus HOM05D003871 ORTHO05D004621 3.6e-54 216.9 451 33.9
Hund16957 Selenicereus undatus HOM05D003871 ORTHO05D004621 3.6e-54 216.9 446 33.6
SEGI_36445 Sequoiadendron giganteum HOM05D003871 ORTHO05D004621 3.6e-54 216.9 454 33.0
Duzib133G0086 Durio zibethinus HOM05D003871 ORTHO05D004621 4.7e-54 216.5 452 33.0
Gohir.D12G107500 Gossypium hirsutum HOM05D003871 ORTHO05D004621 4.7e-54 216.5 451 32.6
Cc02_g37360 Coffea canephora HOM05D003871 ORTHO05D004621 6.2e-54 216.1 449 33.9
Pp3c11_20980 Physcomitrium patens HOM05D003871 ORTHO05D004621 6.2e-54 216.1 448 33.3
Gohir.A11G085600 Gossypium hirsutum HOM05D003871 ORTHO05D004621 8.1e-54 215.7 451 33.0
A07p25320 Brassica napus HOM05D003871 ORTHO05D004621 1.1e-53 215.3 462 32.0
CSS0031493 Camellia sinensis var. sinensis HOM05D003871 ORTHO05D004621 1.1e-53 215.3 451 32.6
CSS0038711 Camellia sinensis var. sinensis HOM05D003871 ORTHO05D004621 1.1e-53 215.3 451 32.6
Gohir.A12G104100 Gossypium hirsutum HOM05D003871 ORTHO05D004621 1.1e-53 215.3 448 32.6
GSVIVG01027510001 Vitis vinifera HOM05D003871 ORTHO05D004621 1.1e-53 215.3 452 32.5
DCAR_016001 Daucus carota HOM05D003871 ORTHO05D004621 1.4e-53 214.9 449 33.9
FAN10G0206 Fragaria x ananassa HOM05D003871 ORTHO05D004621 1.4e-53 214.9 459 33.1
Gorai.008G117100 Gossypium raimondii HOM05D003871 ORTHO05D004621 1.4e-53 214.9 450 32.7
Hma1.2p1_0033F.1_g020520 Hydrangea macrophylla HOM05D003871 ORTHO05D004621 1.4e-53 214.9 453 32.0
Sed0001471 Sechium edule HOM05D003871 ORTHO05D004621 1.4e-53 214.9 452 33.2
Mapoly0035s0029 Marchantia polymorpha HOM05D003871 ORTHO05D004621 1.8e-53 214.5 445 34.2
Medtr7g076160 Medicago truncatula HOM05D003871 ORTHO05D004621 1.8e-53 214.5 443 34.8
PSO782G3116 Papaver somniferum HOM05D003871 ORTHO05D004621 1.8e-53 214.5 442 33.7
SalBow3G3192 Salvia bowleyana HOM05D003871 ORTHO05D004621 1.8e-53 214.5 466 33.3
PGSC0003DMG400027768 Solanum tuberosum HOM05D003871 ORTHO05D004621 1.8e-53 214.5 439 34.6
Lalb_Chr10g0097451 Lupinus albus HOM05D003871 ORTHO05D004621 3.1e-53 213.8 453 33.6
CiPaw.02G026100 Carya illinoinensis HOM05D003871 ORTHO05D004621 4.0e-53 213.4 469 32.4
ECA234G1945 Erigeron canadensis HOM05D003871 ORTHO05D005816 4.0e-53 213.4 442 32.4
BolC6t37886H Brassica oleracea HOM05D003871 ORTHO05D004621 5.2e-53 213.0 463 31.7
Haze_27079 Corylus avellana HOM05D003871 ORTHO05D004621 5.2e-53 213.0 458 31.0
MELO3C006142.2 Cucumis melo HOM05D003871 ORTHO05D004621 5.2e-53 213.0 451 32.8
Nn1g01381 Nelumbo nucifera HOM05D003871 ORTHO05D004621 5.2e-53 213.0 475 32.0
EL10Ac1g00989 Beta vulgaris HOM05D003871 ORTHO05D004621 6.8e-53 212.6 454 33.0
CiPaw.02G026000 Carya illinoinensis HOM05D003871 ORTHO05D004621 6.8e-53 212.6 471 31.2
C06p27130 Brassica napus HOM05D003871 ORTHO05D004621 8.9e-53 212.2 462 31.8
CAN.G170.26 Capsicum annuum HOM05D003871 ORTHO05D004621 1.5e-52 211.5 453 33.8
CsaV3_3G009220 Cucumis sativus L. HOM05D003871 ORTHO05D004621 1.5e-52 211.5 451 32.6
FAN01G1876 Fragaria x ananassa HOM05D003871 ORTHO05D004621 1.5e-52 211.5 467 32.3
FAN03G3137 Fragaria x ananassa HOM05D003871 ORTHO05D004621 1.5e-52 211.5 467 32.3
FAN06G4052 Fragaria x ananassa HOM05D003871 ORTHO05D004621 1.5e-52 211.5 467 32.3
FAN10G4186 Fragaria x ananassa HOM05D003871 ORTHO05D004621 1.5e-52 211.5 445 33.3
Sed0018711 Sechium edule HOM05D003871 ORTHO05D004621 1.5e-52 211.5 455 33.0
SGA_v2.0_scaffold153G37076 Striga asiatica HOM05D003871 ORTHO05D004621 1.5e-52 211.5 452 33.6
FAN06G3893 Fragaria x ananassa HOM05D003871 ORTHO05D004621 2.6e-52 210.7 467 32.1
Potri.014G075500 Populus trichocarpa HOM05D003871 ORTHO05D004621 2.6e-52 210.7 444 32.7
ATR0757G035 Amborella trichopoda HOM05D003871 ORTHO05D004621 3.4e-52 210.3 352 36.6
BraA09t40745Z Brassica rapa HOM05D003871 ORTHO05D004621 3.4e-52 210.3 453 32.7
TWI23G1177 Tripterygium wilfordii HOM05D003871 ORTHO05D004621 4.4e-52 209.9 460 32.4
Aa31LG10G15210 Aethionema arabicum HOM05D003871 ORTHO05D004621 5.8e-52 209.5 460 32.2
Ca_07858_v3 Cicer arietinum L. HOM05D003871 ORTHO05D004621 5.8e-52 209.5 434 33.4
PGR042G2189 Punica granatum HOM05D003871 ORTHO05D004621 5.8e-52 209.5 453 31.6
Sabra02G0122500 Salix brachista HOM05D003871 ORTHO05D004621 1.3e-51 208.4 455 32.5
Cre05.g234300 Chlamydomonas reinhardtii HOM05D003871 ORTHO05D004621 2.2e-51 207.6 484 33.3
MSTRG.20801 Avicennia marina HOM05D003871 ORTHO05D004621 2.9e-51 207.2 451 32.4
CSS0039371 Camellia sinensis var. sinensis HOM05D003871 ORTHO05D004621 2.9e-51 207.2 448 32.6
Nitab4.5_0004973g0020 Nicotiana tabacum HOM05D003871 ORTHO05D004621 6.4e-51 206.1 441 34.5
TWI14G1012 Tripterygium wilfordii HOM05D003871 ORTHO05D004621 6.4e-51 206.1 453 32.0
Eucgr.E00211 Eucalyptus grandis HOM05D003871 ORTHO05D004621 1.1e-50 205.3 458 31.9
SMO365G0068 Selaginella moellendorffii HOM05D003871 ORTHO05D004621 1.4e-50 204.9 447 32.2
arahy.Tifrunner.gnm1.ann1.I68A9W Arachis hypogaea HOM05D003871 ORTHO05D004621 1.9e-50 204.5 478 31.4
arahy.Tifrunner.gnm1.ann1.WVA4TF Arachis hypogaea HOM05D003871 ORTHO05D004621 1.9e-50 204.5 478 31.4
TPR.G37846 Trifolium pratense HOM05D003871 ORTHO05D004621 2.4e-50 204.1 445 32.6
Haze_15212 Corylus avellana HOM05D003871 ORTHO05D004621 3.2e-50 203.8 467 31.7
Peaxi162Scf00021g00920 Petunia axillaris HOM05D003871 ORTHO05D004621 3.2e-50 203.8 440 34.3
Psat3g113760 Pisum sativum HOM05D003871 ORTHO05D004621 3.2e-50 203.8 445 31.7
Gorai.007G095800 Gossypium raimondii HOM05D003871 ORTHO05D004621 5.4e-50 203.0 352 35.8
Dinv16518 Davidia involucrata HOM05D003871 ORTHO05D004621 9.2e-50 202.2 455 32.1
Nitab4.5_0005109g0020 Nicotiana tabacum HOM05D003871 ORTHO05D004621 1.6e-49 201.4 475 32.4
MCO11G248 Micromonas commoda HOM05D003871 ORTHO05D004621 1.7e-48 198.0 457 31.5
AagrBONN_evm.TU.Sc2ySwM_362.2141 Anthoceros agrestis HOM05D003871 ORTHO05D004621 3.0e-48 197.2 404 34.2
SHI13479 Sapria himalayana HOM05D003871 ORTHO05D004621 1.1e-47 195.3 449 30.3
Hund27317 Selenicereus undatus HOM05D003871 ORTHO05D004621 4.3e-47 193.4 354 34.7
Lsat_1_v5_gn_4_37061 Lactuca sativa HOM05D003871 ORTHO05D004621 2.1e-46 191.0 453 31.1
CSS0026628 Camellia sinensis var. sinensis HOM05D003871 ORTHO05D004621 2.8e-46 190.7 349 35.0
Rhsim07G0020500 Rhododendron simsii HOM05D003871 ORTHO05D004621 6.2e-46 189.5 492 29.9
ClCG05G001830 Citrullus lanatus HOM05D003871 ORTHO05D004621 3.1e-45 187.2 457 31.1
PSO782G0235 Papaver somniferum HOM05D003871 ORTHO05D004621 1.7e-43 181.4 443 31.8
vmacro20965 Vaccinium macrocarpon HOM05D003871 ORTHO05D004621 6.4e-43 179.5 499 28.7
MBI12_g36508_MAGBIO Magnolia biondii HOM05D003871 ORTHO05D004621 1.4e-42 178.3 454 30.0
Cpa.g.sc18.218 Carica papaya HOM05D003871 ORTHO05D004621 4.1e-42 176.8 348 33.9
SGA_v2.0_scaffold95G28865 Striga asiatica HOM05D003871 ORTHO05D004621 9.2e-42 175.6 448 30.6
TAR375G0585 Trochodendron aralioides HOM05D003871 ORTHO05D004621 3.5e-41 173.7 322 34.5
MD01G1050400 Malus domestica HOM05D003871 ORTHO05D004621 6.0e-41 172.9 495 28.7
Ca_23745_v3 Cicer arietinum L. HOM05D003871 ORTHO05D004621 6.6e-40 169.5 446 29.4
Sabra14G0056300 Salix brachista HOM05D003871 ORTHO05D004621 8.1e-38 162.5 479 28.8
Actinidia38296 Actinidia chinensis HOM05D003871 ORTHO05D004621 2.4e-37 161.0 346 32.1
Rhsim01G0153400 Rhododendron simsii HOM05D003871 ORTHO05D004621 3.4e-36 157.1 574 26.1
SEGI_15431 Sequoiadendron giganteum HOM05D003871 ORTHO05D004621 2.9e-35 154.1 296 34.1
Pp3c7_5660 Physcomitrium patens HOM05D003871 ORTHO05D004621 1.1e-34 152.1 306 34.3
vmacro13332 Vaccinium macrocarpon HOM05D003871 ORTHO05D004621 1.7e-32 144.8 488 25.6
CSS0019666 Camellia sinensis var. sinensis HOM05D003871 ORTHO05D004621 3.9e-32 143.7 439 28.2
AUR62022749 Chenopodium quinoa HOM05D000087 ORTHO05D004621 1.5e-31 141.7 269 34.9
Lj7C518G12 Lonicera japonica HOM05D003871 ORTHO05D004621 3.3e-31 140.6 447 26.8
RcHm_v2.0_Chr1g0352641 Rosa chinensis HOM05D003871 ORTHO05D004621 1.3e-27 128.6 265 34.0
AL8G39820 Arabidopsis lyrata HOM05D003871 ORTHO05D004621 4.3e-23 113.6 278 28.8
CARHR257760 Cardamine hirsuta HOM05D003871 ORTHO05D004621 6.2e-22 109.8 243 30.9
Actinidia32928 Actinidia chinensis HOM05D003871 ORTHO05D004621 9.9e-20 102.4 424 25.7
Peaxi162Scf00233g00516 Petunia axillaris HOM05D003871 ORTHO05D004621 1.4e-18 98.6 233 31.3
BolC3t17208H Brassica oleracea HOM05D003843 ORTHO05D004621 1.9e-18 98.2 158 36.7
Medtr6g025300 Medicago truncatula HOM05D003871 ORTHO05D004621 7.1e-18 96.3 403 23.8
C03p49270 Brassica napus HOM05D003871 ORTHO05D004621 4.6e-17 93.6 359 25.6
EL10Ac1g00724 Beta vulgaris HOM05D003871 ORTHO05D004621 4.3e-15 87.0 165 36.4
Carub.0003s3282 Capsella rubella HOM05D003871 ORTHO05D004621 5.6e-15 86.7 293 25.6
BcaC01g03725 Brassica carinata HOM05D003871 ORTHO05D004621 2.1e-14 84.7 232 28.4
Zm00001eb403970 Zea mays HOM05D003871 ORTHO05D004621 4.2e-10 70.5 125 36.0
RcHm_v2.0_Chr1g0352651 Rosa chinensis HOM05D003871 ORTHO05D004621 3.5e-09 67.4 158 31.0
Cre13.g581450 Chlamydomonas reinhardtii HOM05D003221 ORTHO05D004432 1.1e-07 62.4 344 22.4
CBR_g34614 Chara braunii HOM05D000019 ORTHO05D000002 5.7e-07 60.1 134 31.3


User provided reference genes

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