Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa025685 Carpinus fangiana HOM05D006286 ORTHO05D007741 8.8e-156 553.5 267 100.0
Glyma.10G240400 Glycine max HOM05D006286 ORTHO05D007741 4.1e-28 129.4 275 33.1
RcHm_v2.0_Chr1g0376301 Rosa chinensis HOM05D006286 ORTHO05D007741 7.0e-28 128.6 252 34.1
FAN01G0056 Fragaria x ananassa HOM05D006286 ORTHO05D007741 9.1e-28 128.3 258 32.9
TPR.G17410 Trifolium pratense HOM05D006286 ORTHO05D007741 1.2e-27 127.9 290 32.1
FAN06G1618 Fragaria x ananassa HOM05D006286 ORTHO05D007741 2.6e-27 126.7 277 32.5
Os03g0119000 Oryza sativa ssp. japonica HOM05D006286 ORTHO05D007741 2.6e-27 126.7 242 35.5
Aqoxy7G00487 Aquilegia oxysepala HOM05D006286 ORTHO05D007741 4.5e-27 125.9 239 34.3
FAN10G3629 Fragaria x ananassa HOM05D006286 ORTHO05D007741 4.5e-27 125.9 276 32.6
Psat6g201680 Pisum sativum HOM05D006286 ORTHO05D007741 5.9e-27 125.6 261 34.1
arahy.Tifrunner.gnm1.ann1.MQ4KH5 Arachis hypogaea HOM05D006286 ORTHO05D007741 7.7e-27 125.2 270 33.3
FAN06G4550 Fragaria x ananassa HOM05D006286 ORTHO05D007741 7.7e-27 125.2 258 32.9
vmacro09869 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 7.7e-27 125.2 255 34.5
EL10Ac3g05740 Beta vulgaris HOM05D006286 ORTHO05D007741 1.0e-26 124.8 249 35.7
FvH4_7g28750 Fragaria vesca HOM05D006286 ORTHO05D007741 1.0e-26 124.8 276 32.2
FAN03G0223 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.0e-26 124.8 276 33.0
Sc13g0008250 Simmondsia chinensis HOM05D006286 ORTHO05D007741 1.7e-26 124.0 260 33.5
FAN03G0937 Fragaria x ananassa HOM05D006286 ORTHO05D007741 2.2e-26 123.6 276 33.0
Lj5g0022226 Lotus japonicus HOM05D006286 ORTHO05D007741 3.8e-26 122.9 273 32.2
PSO478G4977 Papaver somniferum HOM05D006286 ORTHO05D007741 3.8e-26 122.9 274 32.5
Phvul.007G065700 Phaseolus vulgaris HOM05D006286 ORTHO05D007741 3.8e-26 122.9 280 31.8
HPP92_003528 Vanilla planifolia HOM05D006286 ORTHO05D007741 3.8e-26 122.9 241 35.3
Sabra15G0147300 Salix brachista HOM05D006286 ORTHO05D007741 5.0e-26 122.5 279 32.3
Gorai.006G196900 Gossypium raimondii HOM05D006286 ORTHO05D007741 6.5e-26 122.1 254 32.7
TAR629G0337 Trochodendron aralioides HOM05D006286 ORTHO05D007741 8.5e-26 121.7 253 33.6
GSVIVG01018444001 Vitis vinifera HOM05D006286 ORTHO05D007741 8.5e-26 121.7 256 33.2
CiPaw.03G100700 Carya illinoinensis HOM05D006286 ORTHO05D007741 1.1e-25 121.3 250 32.8
MD01G1193900 Malus domestica HOM05D006286 ORTHO05D007741 1.1e-25 121.3 251 33.5
PSO782G2014 Papaver somniferum HOM05D006286 ORTHO05D007741 1.1e-25 121.3 256 33.2
PSO782G5477 Papaver somniferum HOM05D006286 ORTHO05D007741 1.1e-25 121.3 256 33.2
Ciclev10005723m.g Citrus clementina HOM05D006286 ORTHO05D007741 1.5e-25 120.9 276 33.3
Cc02_g03560 Coffea canephora HOM05D006286 ORTHO05D007741 1.5e-25 120.9 249 32.5
Potri.015G135300 Populus trichocarpa HOM05D006286 ORTHO05D007741 1.5e-25 120.9 279 31.9
Ca_10810_v3 Cicer arietinum L. HOM05D006286 ORTHO05D007741 1.9e-25 120.6 254 34.3
Eucgr.A02845 Eucalyptus grandis HOM05D006286 ORTHO05D007741 1.9e-25 120.6 254 33.5
Prupe.2G287700 Prunus persica HOM05D006286 ORTHO05D007741 1.9e-25 120.6 274 32.1
Gohir.A09G179500 Gossypium hirsutum HOM05D006286 ORTHO05D007741 2.5e-25 120.2 254 32.3
QL09p015278 Quercus lobata HOM05D006286 ORTHO05D007741 2.5e-25 120.2 250 32.8
Atru.chr1.554 Acer truncatum HOM05D006286 ORTHO05D007741 3.2e-25 119.8 275 32.7
DCAR_018141 Daucus carota HOM05D006286 ORTHO05D007741 4.2e-25 119.4 264 33.7
Lalb_Chr06g0160901 Lupinus albus HOM05D006286 ORTHO05D007741 4.2e-25 119.4 254 32.7
Cfa008258 Carpinus fangiana HOM05D006286 ORTHO05D007741 5.5e-25 119.0 272 32.0
Haze_13788 Corylus avellana HOM05D006286 ORTHO05D007741 7.2e-25 118.6 272 31.6
ClCG05G007720 Citrullus lanatus HOM05D006286 ORTHO05D007741 1.2e-24 117.9 254 31.5
Nn1g01303 Nelumbo nucifera HOM05D006286 ORTHO05D007741 1.2e-24 117.9 252 33.3
Aa31sc908G10 Aethionema arabicum HOM05D006286 ORTHO05D007741 1.6e-24 117.5 253 33.2
Ah.13g067810 Amaranthus hybridus HOM05D006286 ORTHO05D007741 1.6e-24 117.5 249 33.3
Gohir.D13G056900 Gossypium hirsutum HOM05D006286 ORTHO05D007741 2.1e-24 117.1 251 33.1
Manes.14G030600 Manihot esculenta HOM05D006286 ORTHO05D007741 2.1e-24 117.1 279 32.6
Rhsim09G0195200 Rhododendron simsii HOM05D006286 ORTHO05D007741 3.6e-24 116.3 258 33.3
CANSAT25G1059 Cannabis sativa HOM05D006286 ORTHO05D007741 4.7e-24 115.9 254 31.1
Rhsim03G0175100 Rhododendron simsii HOM05D006286 ORTHO05D007741 4.7e-24 115.9 258 32.6
Gorai.013G064300 Gossypium raimondii HOM05D006286 ORTHO05D007741 6.1e-24 115.5 251 32.7
Cpa.g.sc4.205 Carica papaya HOM05D006286 ORTHO05D007741 8.0e-24 115.2 254 31.5
ECA238G1566 Erigeron canadensis HOM05D006286 ORTHO05D007741 8.0e-24 115.2 259 30.5
HanXRQChr14g0461801 Helianthus annuus HOM05D006286 ORTHO05D007741 1.0e-23 114.8 248 32.3
TWI39G0272 Tripterygium wilfordii HOM05D006286 ORTHO05D007741 1.0e-23 114.8 273 31.1
Lsat_1_v5_gn_2_130220 Lactuca sativa HOM05D006286 ORTHO05D007741 1.4e-23 114.4 260 31.5
Peaxi162Scf00192g00519 Petunia axillaris HOM05D006286 ORTHO05D007741 1.4e-23 114.4 255 32.2
Thecc.03G167300 Theobroma cacao HOM05D006286 ORTHO05D007741 1.4e-23 114.4 251 32.3
CSS0046699 Camellia sinensis var. sinensis HOM05D006286 ORTHO05D007741 1.8e-23 114.0 254 32.7
Oeu047963.2 Olea europaea HOM05D006286 ORTHO05D007741 1.8e-23 114.0 260 31.2
Actinidia25052 Actinidia chinensis HOM05D006286 ORTHO05D007741 2.3e-23 113.6 256 31.6
Sp6g14140 Schrenkiella parvula HOM05D006286 ORTHO05D007741 2.3e-23 113.6 253 32.4
AUR62021266 Chenopodium quinoa HOM05D006286 ORTHO05D007741 4.0e-23 112.8 244 34.0
Gohir.A13G064700 Gossypium hirsutum HOM05D006286 ORTHO05D007741 4.0e-23 112.8 251 32.7
MELO3C006861.2 Cucumis melo HOM05D006286 ORTHO05D007741 5.2e-23 112.5 254 31.1
CsaV3_3G016660 Cucumis sativus L. HOM05D006286 ORTHO05D007741 5.2e-23 112.5 254 31.1
AT5G51880 Arabidopsis thaliana HOM05D006286 ORTHO05D007741 6.7e-23 112.1 253 32.4
Carub.0008s1192 Capsella rubella HOM05D006286 ORTHO05D007741 6.7e-23 112.1 253 32.4
Nitab4.5_0004911g0020 Nicotiana tabacum HOM05D006286 ORTHO05D007741 6.7e-23 112.1 276 31.9
AL8G26180 Arabidopsis lyrata HOM05D006286 ORTHO05D007741 8.8e-23 111.7 253 32.4
Duzib084G1364 Durio zibethinus HOM05D006286 ORTHO05D007741 8.8e-23 111.7 253 32.0
Sed0023063 Sechium edule HOM05D006286 ORTHO05D007741 8.8e-23 111.7 251 31.9
Dinv28504 Davidia involucrata HOM05D006286 ORTHO05D007741 1.1e-22 111.3 224 33.9
SGA_v2.0_scaffold113G31783 Striga asiatica HOM05D006286 ORTHO05D007741 1.1e-22 111.3 259 30.5
VMungo0720G2540 Vigna mungo HOM05D006286 ORTHO05D007741 1.1e-22 111.3 265 31.3
Thhalv10014484m.g Eutrema salsugineum HOM05D006286 ORTHO05D007741 1.5e-22 110.9 254 32.3
PGR042G3452 Punica granatum HOM05D006286 ORTHO05D007741 1.5e-22 110.9 237 32.9
unitig_37.g11947 Utricularia gibba HOM05D006286 ORTHO05D007741 2.6e-22 110.2 250 32.8
Actinidia14215 Actinidia chinensis HOM05D006286 ORTHO05D007741 3.3e-22 109.8 270 31.9
BcaB08g35541 Brassica carinata HOM05D006286 ORTHO05D007741 3.3e-22 109.8 260 32.3
BcaC04g20627 Brassica carinata HOM05D006286 ORTHO05D007741 4.4e-22 109.4 255 32.9
C09p41380 Brassica napus HOM05D006286 ORTHO05D007741 4.4e-22 109.4 255 32.9
BolC9t57014H Brassica oleracea HOM05D006286 ORTHO05D007741 4.4e-22 109.4 255 32.9
Pp3c22_4190 Physcomitrium patens HOM05D006286 ORTHO05D007741 4.4e-22 109.4 234 34.6
CAN.G1097.8 Capsicum annuum HOM05D006286 ORTHO05D007741 7.5e-22 108.6 249 31.7
Mapoly0028s0137 Marchantia polymorpha HOM05D006286 ORTHO05D007741 7.5e-22 108.6 248 34.7
Hund04686 Selenicereus undatus HOM05D006286 ORTHO05D007741 7.5e-22 108.6 243 32.5
THA.LOC104825086 Tarenaya hassleriana HOM05D006286 ORTHO05D007741 9.7e-22 108.2 273 30.0
A10p09720 Brassica napus HOM05D006286 ORTHO05D007741 1.3e-21 107.8 257 32.3
BraA10t43052Z Brassica rapa HOM05D006286 ORTHO05D007741 1.3e-21 107.8 257 32.3
SMO139G0115 Selaginella moellendorffii HOM05D006286 ORTHO05D007741 2.2e-21 107.1 246 32.5
Sopen03g002810 Solanum pennellii HOM05D006286 ORTHO05D007741 2.8e-21 106.7 274 30.3
Solyc03g006820.3 Solanum lycopersicum HOM05D006286 ORTHO05D007741 3.7e-21 106.3 274 30.3
ATR0757G128 Amborella trichopoda HOM05D006286 ORTHO05D007741 6.3e-21 105.5 256 30.5
CDE12G0688 Ceratophyllum demersum HOM05D006286 ORTHO05D007741 1.1e-20 104.8 225 32.9
AUR62016058 Chenopodium quinoa HOM05D006286 ORTHO05D007741 1.1e-20 104.8 223 33.6
PGSC0003DMG400024248 Solanum tuberosum HOM05D006286 ORTHO05D007741 1.1e-20 104.8 250 30.4
Migut.F00396 Erythranthe guttata HOM05D006286 ORTHO05D007741 1.8e-20 104.0 259 29.7
Nitab4.5_0000832g0010 Nicotiana tabacum HOM05D006286 ORTHO05D007741 2.4e-20 103.6 226 32.7
MSTRG.8433 Avicennia marina HOM05D006286 ORTHO05D007741 3.1e-20 103.2 238 31.1
Lj8A31T63 Lonicera japonica HOM05D006286 ORTHO05D007741 4.1e-20 102.8 228 33.3
CARHR264790 Cardamine hirsuta HOM05D006286 ORTHO05D007741 1.6e-19 100.9 227 33.5
vmacro06741 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 2.9e-18 96.7 227 31.3
arahy.Tifrunner.gnm1.ann1.TWGE9F Arachis hypogaea HOM05D006286 ORTHO05D007741 5.0e-18 95.9 239 32.2
Glyma.20G154300 Glycine max HOM05D006286 ORTHO05D007741 5.0e-18 95.9 217 30.4
MCO04G355 Micromonas commoda HOM05D006286 ORTHO05D007741 5.0e-18 95.9 177 35.0
Cre14.g619900 Chlamydomonas reinhardtii HOM05D006286 ORTHO05D007741 6.5e-18 95.5 233 31.8
AagrBONN_evm.TU.Sc2ySwM_368.2699 Anthoceros agrestis HOM05D006286 ORTHO05D007741 7.2e-17 92.0 240 32.1
MBI12_g36686_MAGBIO Magnolia biondii HOM05D006286 ORTHO05D007741 9.4e-17 91.7 195 32.8
Medtr1g101840 Medicago truncatula HOM05D006286 ORTHO05D007741 1.0e-15 88.2 163 38.7
SalBow2G2245 Salvia bowleyana HOM05D006286 ORTHO05D007741 1.8e-15 87.4 259 27.4
COL.COLO4_14231 Corchorus olitorius HOM05D006286 ORTHO05D007741 6.8e-15 85.5 194 33.0
Gohir.D09G174800 Gossypium hirsutum HOM05D006286 ORTHO05D007741 3.4e-14 83.2 140 37.9
Zm00001eb001360 Zea mays HOM05D006286 ORTHO05D007741 5.4e-12 75.9 163 33.7
SEGI_34239 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 1.2e-11 74.7 193 29.5
Potri.012G133100 Populus trichocarpa HOM05D006286 ORTHO05D007741 1.0e-10 71.6 282 27.0
CiPaw.15G075500 Carya illinoinensis HOM05D006286 ORTHO05D007741 1.5e-09 67.8 235 25.1
Actinidia03097 Actinidia chinensis HOM05D006286 ORTHO05D007741 7.2e-09 65.5 138 34.1


User provided reference genes

Program Settings