Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa025671 Carpinus fangiana HOM05D004029 ORTHO05D004613 0.0e+00 2245.3 1206 100.0
Sopen07g031610 Solanum pennellii HOM05D004029 ORTHO05D004613 1.2e-21 110.2 705 23.3
Nitab4.5_0001204g0130 Nicotiana tabacum HOM05D004029 ORTHO05D004613 7.5e-21 107.5 561 25.5
Solyc07g063440.3 Solanum lycopersicum HOM05D004029 ORTHO05D004613 2.2e-20 105.9 705 23.0
CAN.G162.91 Capsicum annuum HOM05D004029 ORTHO05D004613 1.8e-19 102.8 616 24.5
Peaxi162Scf01111g00112 Petunia axillaris HOM05D004029 ORTHO05D004613 1.6e-18 99.8 571 23.8
FAN11G1114 Fragaria x ananassa HOM05D004029 ORTHO05D004613 2.3e-17 95.9 583 25.0
FvH4_3g20750 Fragaria vesca HOM05D004029 ORTHO05D004613 3.9e-17 95.1 583 25.0
FAN16G1973 Fragaria x ananassa HOM05D004029 ORTHO05D004613 3.9e-17 95.1 583 25.0
FAN25G1694 Fragaria x ananassa HOM05D004029 ORTHO05D004613 3.9e-17 95.1 583 24.7
FAN21G1497 Fragaria x ananassa HOM05D004029 ORTHO05D004613 5.0e-17 94.7 583 24.9
Sed0019496 Sechium edule HOM05D004029 ORTHO05D004613 5.0e-17 94.7 823 22.5
arahy.Tifrunner.gnm1.ann1.3J4V9H Arachis hypogaea HOM05D004029 ORTHO05D004613 6.6e-17 94.4 698 22.2
ATR0064G128 Amborella trichopoda HOM05D004029 ORTHO05D004613 8.6e-17 94.0 707 23.6
Sabra11G0109200 Salix brachista HOM05D004029 ORTHO05D004613 1.1e-16 93.6 692 22.4
AUR62015624 Chenopodium quinoa HOM05D004029 ORTHO05D004613 1.5e-16 93.2 583 24.0
MD11G1239600 Malus domestica HOM05D004029 ORTHO05D004613 1.5e-16 93.2 533 24.8
Migut.H01912 Erythranthe guttata HOM05D004029 ORTHO05D004613 1.9e-16 92.8 570 24.9
Nn1g03970 Nelumbo nucifera HOM05D004029 ORTHO05D004613 1.9e-16 92.8 602 23.3
Potri.011G123900 Populus trichocarpa HOM05D004029 ORTHO05D004613 3.3e-16 92.0 705 22.1
Actinidia05171 Actinidia chinensis HOM05D004029 ORTHO05D004613 4.3e-16 91.7 582 24.7
Ah.06g183680 Amaranthus hybridus HOM05D004029 ORTHO05D004613 4.3e-16 91.7 566 23.1
MSTRG.12924 Avicennia marina HOM05D004029 ORTHO05D004613 4.3e-16 91.7 694 23.5
AUR62029337 Chenopodium quinoa HOM05D004029 ORTHO05D004613 5.6e-16 91.3 582 24.2
arahy.Tifrunner.gnm1.ann1.IWX37I Arachis hypogaea HOM05D004029 ORTHO05D004613 9.5e-16 90.5 709 22.1
Oeu008022.1 Olea europaea HOM05D004029 ORTHO05D004613 1.2e-15 90.1 565 23.7
Prupe.4G187500 Prunus persica HOM05D004029 ORTHO05D004613 1.2e-15 90.1 540 24.8
Duzib213G0443 Durio zibethinus HOM05D004029 ORTHO05D004613 1.6e-15 89.7 707 23.2
Mapoly0031s0138 Marchantia polymorpha HOM05D004029 ORTHO05D004613 2.1e-15 89.4 165 33.9
DCAR_013079 Daucus carota HOM05D004029 ORTHO05D004613 2.8e-15 89.0 534 24.0
PSO675G2841 Papaver somniferum HOM05D004029 ORTHO05D004613 2.8e-15 89.0 613 24.6
Nitab4.5_0000815g0060 Nicotiana tabacum HOM05D004029 ORTHO05D004613 3.6e-15 88.6 561 24.4
PSO541G4143 Papaver somniferum HOM05D004029 ORTHO05D004613 3.6e-15 88.6 613 24.6
MD03G1222200 Malus domestica HOM05D004029 ORTHO05D004613 4.7e-15 88.2 533 24.2
RcHm_v2.0_Chr5g0034971 Rosa chinensis HOM05D004029 ORTHO05D004613 4.7e-15 88.2 576 23.8
Os12g0554400 Oryza sativa ssp. japonica HOM05D004029 ORTHO05D004613 6.1e-15 87.8 721 22.7
CANSAT11G2434 Cannabis sativa HOM05D004029 ORTHO05D004613 8.0e-15 87.4 694 22.2
ClCG11G018320 Citrullus lanatus HOM05D004029 ORTHO05D004613 8.0e-15 87.4 172 33.1
Phvul.005G085200 Phaseolus vulgaris HOM05D004029 ORTHO05D004613 8.0e-15 87.4 572 23.3
PGR031G0420 Punica granatum HOM05D004029 ORTHO05D004613 1.0e-14 87.0 834 21.7
TWI38G0763 Tripterygium wilfordii HOM05D004029 ORTHO05D004613 1.0e-14 87.0 850 22.2
COL.COLO4_03559 Corchorus olitorius HOM05D004029 ORTHO05D004613 2.3e-14 85.9 710 22.8
Ca_01815_v3 Cicer arietinum L. HOM05D004029 ORTHO05D004613 3.1e-14 85.5 568 24.1
CSS0001233 Camellia sinensis var. sinensis HOM05D004029 ORTHO05D004613 4.0e-14 85.1 581 24.3
CSS0038840 Camellia sinensis var. sinensis HOM05D004029 ORTHO05D004613 4.0e-14 85.1 581 24.3
Duzib268G1628 Durio zibethinus HOM05D004029 ORTHO05D004613 4.0e-14 85.1 715 22.2
Sp6g16420 Schrenkiella parvula HOM05D004029 ORTHO05D004613 4.0e-14 85.1 711 21.9
EL10Ac4g08092 Beta vulgaris HOM05D004029 ORTHO05D004613 5.2e-14 84.7 573 23.2
BcaC03g14313 Brassica carinata HOM05D004029 ORTHO05D004613 5.2e-14 84.7 711 22.2
Carub.0008s1474 Capsella rubella HOM05D004029 ORTHO05D004613 5.2e-14 84.7 571 24.0
VMungo1080G0798 Vigna mungo HOM05D004029 ORTHO05D004613 5.2e-14 84.7 572 22.4
CiPaw.11G174500 Carya illinoinensis HOM05D004029 ORTHO05D004613 6.8e-14 84.3 569 23.9
A10p11660 Brassica napus HOM05D004029 ORTHO05D004613 8.9e-14 84.0 1089 21.0
Hund02202 Selenicereus undatus HOM05D004029 ORTHO05D004613 8.9e-14 84.0 582 24.2
A02p10290 Brassica napus HOM05D004029 ORTHO05D004613 1.2e-13 83.6 711 22.5
BraA02t06097Z Brassica rapa HOM05D004029 ORTHO05D004613 1.2e-13 83.6 711 22.5
BraA10t43261Z Brassica rapa HOM05D004029 ORTHO05D004613 1.2e-13 83.6 853 21.5
Glyma.13G280700 Glycine max HOM05D004029 ORTHO05D004613 1.2e-13 83.6 573 22.7
Psat3g119680 Pisum sativum HOM05D004029 ORTHO05D004613 1.2e-13 83.6 172 33.1
THA.LOC104811852 Tarenaya hassleriana HOM05D004029 ORTHO05D004613 1.5e-13 83.2 586 23.7
Zm00001eb137170 Zea mays HOM05D004029 ORTHO05D004613 1.5e-13 83.2 649 22.0
Aa31LG3G10350 Aethionema arabicum HOM05D004029 ORTHO05D004613 2.0e-13 82.8 595 23.4
Aqoxy7G04099 Aquilegia oxysepala HOM05D004029 ORTHO05D004613 2.0e-13 82.8 622 22.8
Glyma.12G220900 Glycine max HOM05D004029 ORTHO05D004613 2.0e-13 82.8 558 23.3
BcaB05g22133 Brassica carinata HOM05D004029 ORTHO05D004613 2.6e-13 82.4 706 22.2
Lsat_1_v5_gn_7_105721 Lactuca sativa HOM05D004029 ORTHO05D004613 2.6e-13 82.4 556 23.2
C09p44730 Brassica napus HOM05D004029 ORTHO05D004613 4.4e-13 81.6 574 23.0
Medtr2g080050 Medicago truncatula HOM05D004029 ORTHO05D004613 4.4e-13 81.6 570 23.0
Cfa020529 Carpinus fangiana HOM05D004029 ORTHO05D004613 5.8e-13 81.3 585 23.6
Thhalv10012467m.g Eutrema salsugineum HOM05D004029 ORTHO05D004613 5.8e-13 81.3 594 23.6
Gohir.1Z049674 Gossypium hirsutum HOM05D004029 ORTHO05D004613 5.8e-13 81.3 305 25.6
Lj3g0020332 Lotus japonicus HOM05D004029 ORTHO05D004613 5.8e-13 81.3 576 23.3
Rhsim06G0193700 Rhododendron simsii HOM05D004029 ORTHO05D004613 5.8e-13 81.3 616 24.2
BcaC04g20340 Brassica carinata HOM05D004029 ORTHO05D004613 7.5e-13 80.9 572 22.9
C02p17030 Brassica napus HOM05D004029 ORTHO05D004613 7.5e-13 80.9 1117 20.8
BolC9t57346H Brassica oleracea HOM05D004029 ORTHO05D004613 7.5e-13 80.9 572 22.9
Psat5g246120 Pisum sativum HOM05D004029 ORTHO05D004613 7.5e-13 80.9 572 22.9
QL08p019114 Quercus lobata HOM05D004029 ORTHO05D004613 9.8e-13 80.5 222 30.2
CARHR267710 Cardamine hirsuta HOM05D004029 ORTHO05D004613 1.3e-12 80.1 704 22.4
Gorai.002G074000 Gossypium raimondii HOM05D004029 ORTHO05D004613 1.3e-12 80.1 707 22.8
BcaB08g35795 Brassica carinata HOM05D004029 ORTHO05D004613 1.7e-12 79.7 677 21.7
Ca_30535_v3 Cicer arietinum L. HOM05D004029 ORTHO05D004613 1.7e-12 79.7 571 23.3
CsaV3_3G044490 Cucumis sativus L. HOM05D004029 ORTHO05D004613 1.7e-12 79.7 693 21.8
Gohir.D01G054200 Gossypium hirsutum HOM05D004029 ORTHO05D004613 1.7e-12 79.7 702 22.8
BolC2t07800H Brassica oleracea HOM05D004029 ORTHO05D004613 2.2e-12 79.3 1115 20.7
Lalb_Chr01g0016971 Lupinus albus HOM05D004029 ORTHO05D004613 2.2e-12 79.3 569 23.2
Lalb_Chr25g0286611 Lupinus albus HOM05D004029 ORTHO05D004613 2.2e-12 79.3 848 22.2
Thecc.07G074600 Theobroma cacao HOM05D004029 ORTHO05D004613 2.9e-12 79.0 707 21.8
Lj1C850G7 Lonicera japonica HOM05D004029 ORTHO05D004613 3.7e-12 78.6 561 23.9
Psat4g074000 Pisum sativum HOM05D004029 ORTHO05D004613 6.4e-12 77.8 172 30.8
Gohir.A01G067000 Gossypium hirsutum HOM05D004029 ORTHO05D004613 8.3e-12 77.4 253 26.5
AT5G54440 Arabidopsis thaliana HOM05D004029 ORTHO05D004613 1.1e-11 77.0 704 21.6
TAR627G0431 Trochodendron aralioides HOM05D004029 ORTHO05D004613 1.1e-11 77.0 267 25.5
Dinv08327 Davidia involucrata HOM05D004029 ORTHO05D004613 1.9e-11 76.3 557 23.7
Manes.03G114700 Manihot esculenta HOM05D004029 ORTHO05D004613 1.9e-11 76.3 556 23.6
GSVIVG01014409001 Vitis vinifera HOM05D004029 ORTHO05D004613 5.4e-11 74.7 586 23.0
Eucgr.F03341 Eucalyptus grandis HOM05D004029 ORTHO05D004613 7.0e-11 74.3 712 22.8
Gorai.007G319300 Gossypium raimondii HOM05D004029 ORTHO05D004613 9.2e-11 73.9 533 22.3
Pp3c26_12060 Physcomitrium patens HOM05D004029 ORTHO05D004613 9.2e-11 73.9 727 21.2
Sc03g0009690 Simmondsia chinensis HOM05D004029 ORTHO05D004613 1.7e-09 69.7 719 21.0
vmacro11822 Vaccinium macrocarpon HOM05D004029 ORTHO05D004613 1.7e-09 69.7 647 22.1
Atru.chr2.2808 Acer truncatum HOM05D004029 ORTHO05D004613 2.3e-09 69.3 75 44.0
Pp3c3_4080 Physcomitrium patens HOM05D004029 ORTHO05D004613 1.1e-06 60.5 65 40.0


User provided reference genes

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