Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa025667 Carpinus fangiana HOM05D003263 ORTHO05D004801 0.0e+00 1630.5 808 100.0
CBR_g6354 Chara braunii HOM05D003263 ORTHO05D004801 1.5e-211 740.3 680 54.7
PRCOL_00000346 Prasinoderma coloniale HOM05D003263 ORTHO05D004801 1.1e-204 717.6 684 53.1
Cre12.g535950 Chlamydomonas reinhardtii HOM05D003263 ORTHO05D004801 9.0e-204 714.5 688 54.2
Mapoly0153s0030 Marchantia polymorpha HOM05D003263 ORTHO05D004801 3.4e-203 712.6 682 54.1
DCAR_014159 Daucus carota HOM05D003263 ORTHO05D004801 7.6e-203 711.4 676 53.6
ECA238G3173 Erigeron canadensis HOM05D003263 ORTHO05D004801 1.3e-202 710.7 675 53.2
HanXRQChr14g0444641 Helianthus annuus HOM05D003263 ORTHO05D004801 3.8e-202 709.1 676 53.4
HanXRQChr07g0191741 Helianthus annuus HOM05D003263 ORTHO05D004801 6.4e-202 708.4 676 53.1
Pp3c1_34140 Physcomitrium patens HOM05D003263 ORTHO05D004801 3.5e-200 702.6 685 53.3
Pp3c1_34100 Physcomitrium patens HOM05D003263 ORTHO05D004801 4.6e-200 702.2 685 53.3
Pp3c1_34110 Physcomitrium patens HOM05D003263 ORTHO05D004801 4.6e-200 702.2 685 53.3
Solyc11g011470.2 Solanum lycopersicum HOM05D003263 ORTHO05D004801 7.9e-200 701.4 676 53.1
MELO3C020331.2 Cucumis melo HOM05D003263 ORTHO05D004801 1.3e-199 700.7 678 52.5
Lsat_1_v5_gn_3_63961 Lactuca sativa HOM05D003263 ORTHO05D004801 1.8e-199 700.3 737 50.3
Sopen11g006260 Solanum pennellii HOM05D003263 ORTHO05D004801 1.8e-199 700.3 676 53.1
SalBow5G3125 Salvia bowleyana HOM05D003263 ORTHO05D004801 3.0e-199 699.5 676 52.8
ClCG05G010610 Citrullus lanatus HOM05D003263 ORTHO05D004801 3.9e-199 699.1 678 52.5
Eucgr.J01621 Eucalyptus grandis HOM05D003263 ORTHO05D004801 3.9e-199 699.1 703 51.6
CSS0018871 Camellia sinensis var. sinensis HOM05D003263 ORTHO05D004801 5.1e-199 698.7 676 52.4
CsaV3_3G017880 Cucumis sativus L. HOM05D003263 ORTHO05D004801 5.1e-199 698.7 678 52.5
Zm00001eb055050 Zea mays HOM05D003263 ORTHO05D004801 5.1e-199 698.7 677 52.9
Sed0016313 Sechium edule HOM05D003263 ORTHO05D004801 6.7e-199 698.4 680 52.9
SMO331G0029 Selaginella moellendorffii HOM05D003263 ORTHO05D004801 1.1e-198 697.6 687 52.5
TWI74G0116 Tripterygium wilfordii HOM05D003263 ORTHO05D004801 1.1e-198 697.6 753 49.5
Peaxi162Scf00464g00325 Petunia axillaris HOM05D003263 ORTHO05D004801 1.5e-198 697.2 676 53.0
FAN19G0316 Fragaria x ananassa HOM05D003263 ORTHO05D004801 1.9e-198 696.8 676 52.5
MD09G1268900 Malus domestica HOM05D003263 ORTHO05D004801 1.9e-198 696.8 679 52.3
Os03g0713400 Oryza sativa ssp. japonica HOM05D003263 ORTHO05D004801 1.9e-198 696.8 744 49.7
CANSAT56G4352 Cannabis sativa HOM05D003263 ORTHO05D004801 2.5e-198 696.4 703 50.8
PGSC0003DMG400013309 Solanum tuberosum HOM05D003263 ORTHO05D004801 2.5e-198 696.4 676 52.7
Zm00001eb216210 Zea mays HOM05D003263 ORTHO05D004801 2.5e-198 696.4 718 50.7
FvH4_1g30070 Fragaria vesca HOM05D003263 ORTHO05D004801 3.3e-198 696.0 676 52.1
FAN23G0774 Fragaria x ananassa HOM05D003263 ORTHO05D004801 3.3e-198 696.0 676 52.1
CAN.G222.62 Capsicum annuum HOM05D003263 ORTHO05D004801 4.3e-198 695.7 676 53.1
MD17G1267300 Malus domestica HOM05D003263 ORTHO05D004801 5.6e-198 695.3 676 52.1
FAN26G0816 Fragaria x ananassa HOM05D003263 ORTHO05D004801 7.4e-198 694.9 676 51.8
RcHm_v2.0_Chr3g0491991 Rosa chinensis HOM05D003263 ORTHO05D004801 7.4e-198 694.9 676 52.2
Prupe.3G165400 Prunus persica HOM05D003263 ORTHO05D004801 9.6e-198 694.5 676 51.6
PGR042G3530 Punica granatum HOM05D003263 ORTHO05D004801 9.6e-198 694.5 676 51.9
Hund13092 Selenicereus undatus HOM05D003263 ORTHO05D004801 9.6e-198 694.5 677 52.3
Duzib138G0925 Durio zibethinus HOM05D003263 ORTHO05D004801 1.3e-197 694.1 676 52.8
Manes.02G078500 Manihot esculenta HOM05D003263 ORTHO05D004801 1.6e-197 693.7 742 50.1
Nitab4.5_0011135g0010 Nicotiana tabacum HOM05D003263 ORTHO05D004801 1.6e-197 693.7 676 52.4
Ah.10g032470 Amaranthus hybridus HOM05D003263 ORTHO05D004801 2.1e-197 693.3 676 52.5
SGA_v2.0_scaffold2G00947 Striga asiatica HOM05D003263 ORTHO05D004801 2.1e-197 693.3 676 52.5
PSO478G1645 Papaver somniferum HOM05D003263 ORTHO05D004801 2.8e-197 693.0 677 52.7
Sed0005557 Sechium edule HOM05D003263 ORTHO05D004801 2.8e-197 693.0 676 52.4
Atru.chr1.2038 Acer truncatum HOM05D003263 ORTHO05D004801 4.8e-197 692.2 677 51.8
MSTRG.3699 Avicennia marina HOM05D003263 ORTHO05D004801 4.8e-197 692.2 679 52.4
MCO08G340 Micromonas commoda HOM05D003263 ORTHO05D004801 4.8e-197 692.2 691 52.7
CiPaw.03G074100 Carya illinoinensis HOM05D003263 ORTHO05D004801 6.2e-197 691.8 707 50.4
Ciclev10019002m.g Citrus clementina HOM05D003263 ORTHO05D004801 6.2e-197 691.8 676 51.9
COL.COLO4_13315 Corchorus olitorius HOM05D003263 ORTHO05D004801 8.1e-197 691.4 676 52.4
Duzib133G1400 Durio zibethinus HOM05D003263 ORTHO05D004801 1.1e-196 691.0 677 52.7
Potri.004G082800 Populus trichocarpa HOM05D003263 ORTHO05D004801 1.1e-196 691.0 737 50.2
Thecc.04G063600 Theobroma cacao HOM05D003263 ORTHO05D004801 1.1e-196 691.0 676 52.1
Phvul.001G229000 Phaseolus vulgaris HOM05D003263 ORTHO05D004801 1.4e-196 690.6 755 49.8
TWI77G0544 Tripterygium wilfordii HOM05D003263 ORTHO05D004801 1.4e-196 690.6 744 49.2
Glyma.18G041700 Glycine max HOM05D003263 ORTHO05D004801 1.8e-196 690.3 737 50.1
Sc14g0006900 Simmondsia chinensis HOM05D003263 ORTHO05D004801 3.1e-196 689.5 677 52.1
Gorai.001G197100 Gossypium raimondii HOM05D003263 ORTHO05D004801 4.0e-196 689.1 680 51.6
unitig_748.g8633 Utricularia gibba HOM05D003263 ORTHO05D004801 4.0e-196 689.1 682 53.4
ATR0118G003 Amborella trichopoda HOM05D003263 ORTHO05D004801 5.3e-196 688.7 679 52.0
C04p44380 Brassica napus HOM05D003263 ORTHO05D004801 5.3e-196 688.7 676 51.8
Cc07_g13220 Coffea canephora HOM05D003263 ORTHO05D004801 5.3e-196 688.7 669 52.6
Psat5g119880 Pisum sativum HOM05D003263 ORTHO05D004801 5.3e-196 688.7 756 48.4
Ah.10g032480 Amaranthus hybridus HOM05D003263 ORTHO05D004801 6.9e-196 688.3 676 52.2
Glyma.11G214800 Glycine max HOM05D003263 ORTHO05D004801 6.9e-196 688.3 743 50.2
Medtr3g065130 Medicago truncatula HOM05D003263 ORTHO05D004801 6.9e-196 688.3 676 51.9
PSO017G4553 Papaver somniferum HOM05D003263 ORTHO05D004801 6.9e-196 688.3 677 52.4
EL10Ac2g03207 Beta vulgaris HOM05D003263 ORTHO05D004801 9.0e-196 688.0 676 51.9
CARHR215400 Cardamine hirsuta HOM05D003263 ORTHO05D004801 9.0e-196 688.0 676 51.6
Lj6g0025109 Lotus japonicus HOM05D003263 ORTHO05D004801 1.2e-195 687.6 754 48.3
Potri.017G136133 Populus trichocarpa HOM05D003263 ORTHO05D004801 1.2e-195 687.6 676 52.1
AT5G37510 Arabidopsis thaliana HOM05D003263 ORTHO05D004801 1.5e-195 687.2 676 51.3
BcaB06g27086 Brassica carinata HOM05D003263 ORTHO05D004801 2.0e-195 686.8 676 51.5
A04p10660 Brassica napus HOM05D003263 ORTHO05D004801 2.0e-195 686.8 676 51.6
AUR62037782 Chenopodium quinoa HOM05D003263 ORTHO05D004801 2.0e-195 686.8 676 52.4
VMungo1383G2082 Vigna mungo HOM05D003263 ORTHO05D004801 2.0e-195 686.8 676 52.8
BraA04t16733Z Brassica rapa HOM05D003263 ORTHO05D004801 2.6e-195 686.4 676 51.6
Actinidia35722 Actinidia chinensis HOM05D003263 ORTHO05D004801 3.4e-195 686.0 676 51.9
Gohir.D07G183900 Gossypium hirsutum HOM05D003263 ORTHO05D004801 3.4e-195 686.0 676 51.3
arahy.Tifrunner.gnm1.ann1.AUXW6G Arachis hypogaea HOM05D003263 ORTHO05D004801 4.5e-195 685.6 752 47.7
Gohir.D07G176300 Gossypium hirsutum HOM05D003263 ORTHO05D004801 4.5e-195 685.6 672 51.9
BcaC02g09578 Brassica carinata HOM05D003263 ORTHO05D004801 5.8e-195 685.3 676 51.5
BolC4t26009H Brassica oleracea HOM05D003263 ORTHO05D004801 5.8e-195 685.3 676 51.5
THA.LOC104822242 Tarenaya hassleriana HOM05D003263 ORTHO05D004801 5.8e-195 685.3 755 47.9
THA.LOC104805635 Tarenaya hassleriana HOM05D003263 ORTHO05D004801 7.6e-195 684.9 676 51.0
Migut.K00926 Erythranthe guttata HOM05D003263 ORTHO05D004801 1.3e-194 684.1 678 51.9
Gohir.A07G176600 Gossypium hirsutum HOM05D003263 ORTHO05D004801 1.3e-194 684.1 676 51.5
Carub.0007s3268 Capsella rubella HOM05D003263 ORTHO05D004801 1.7e-194 683.7 676 51.2
Gorai.001G204300 Gossypium raimondii HOM05D003263 ORTHO05D004801 1.7e-194 683.7 676 51.3
Pp3c19_19270 Physcomitrium patens HOM05D003263 ORTHO05D004801 2.2e-194 683.3 679 52.7
Aa31LG9G17530 Aethionema arabicum HOM05D003263 ORTHO05D004801 3.8e-194 682.6 736 48.8
Thhalv10027640m.g Eutrema salsugineum HOM05D003263 ORTHO05D004801 4.9e-194 682.2 676 50.9
TPR.G23206 Trifolium pratense HOM05D003263 ORTHO05D004801 4.9e-194 682.2 754 48.1
TAR629G0765 Trochodendron aralioides HOM05D003263 ORTHO05D004801 6.5e-194 681.8 676 51.5
QL02p059434 Quercus lobata HOM05D003263 ORTHO05D004801 8.4e-194 681.4 676 51.5
Cpa.g.sc116.77 Carica papaya HOM05D003263 ORTHO05D004801 1.4e-193 680.6 703 50.4
AagrBONN_evm.TU.Sc2ySwM_228.2430 Anthoceros agrestis HOM05D003263 ORTHO05D004801 1.9e-193 680.2 681 51.5
Dinv19049 Davidia involucrata HOM05D003263 ORTHO05D004801 2.5e-193 679.9 676 51.2
Lalb_Chr18g0053541 Lupinus albus HOM05D003263 ORTHO05D004801 2.5e-193 679.9 676 51.6
AL1G43210 Arabidopsis lyrata HOM05D003263 ORTHO05D004801 3.2e-193 679.5 678 51.0
Ca_17086_v3 Cicer arietinum L. HOM05D003263 ORTHO05D004801 5.5e-193 678.7 755 48.3
Migut.H02232 Erythranthe guttata HOM05D003263 ORTHO05D004801 5.5e-193 678.7 676 51.6
Gohir.A07G170100 Gossypium hirsutum HOM05D003263 ORTHO05D004801 7.1e-193 678.3 672 51.5
Haze_14285 Corylus avellana HOM05D003263 ORTHO05D004801 9.3e-193 677.9 676 51.8
Aqoxy3G04075 Aquilegia oxysepala HOM05D003263 ORTHO05D004801 1.6e-192 677.2 680 50.9
Rhsim08G0019700 Rhododendron simsii HOM05D003263 ORTHO05D004801 1.6e-192 677.2 730 48.9
MSTRG.15657 Avicennia marina HOM05D003263 ORTHO05D004801 2.1e-192 676.8 739 49.0
Cfa007786 Carpinus fangiana HOM05D003263 ORTHO05D004801 2.7e-192 676.4 676 51.9
Aa31LG9G17520 Aethionema arabicum HOM05D003263 ORTHO05D004801 7.9e-192 674.9 682 50.6
SHI30113 Sapria himalayana HOM05D003263 ORTHO05D004801 5.7e-190 668.7 685 51.2
HPP92_020298 Vanilla planifolia HOM05D003263 ORTHO05D004801 9.6e-190 667.9 676 50.3
Oeu030292.1 Olea europaea HOM05D003263 ORTHO05D004801 2.1e-189 666.8 708 49.4
AL7G46270 Arabidopsis lyrata HOM05D003263 ORTHO05D004801 2.8e-189 666.4 709 48.8
CDE05G1320 Ceratophyllum demersum HOM05D003263 ORTHO05D004801 1.8e-188 663.7 676 51.5
Manes.01G120700 Manihot esculenta HOM05D003263 ORTHO05D004801 3.4e-187 659.4 676 51.3
Nitab4.5_0006562g0010 Nicotiana tabacum HOM05D003263 ORTHO05D004801 5.0e-186 655.6 591 55.2
GSVIVG01030914001 Vitis vinifera HOM05D003263 ORTHO05D004801 1.3e-183 647.5 666 50.6
Haze_26802 Corylus avellana HOM05D003263 ORTHO05D004801 2.4e-180 636.7 701 49.1
AUR62042225 Chenopodium quinoa HOM05D003263 ORTHO05D004801 2.0e-179 633.6 676 49.4
arahy.Tifrunner.gnm1.ann1.ZZ0CH2 Arachis hypogaea HOM05D003263 ORTHO05D004801 5.9e-179 632.1 849 42.2
SGA_v2.0_scaffold108G30966 Striga asiatica HOM05D003263 ORTHO05D004801 6.5e-178 628.6 676 48.8
Lalb_Chr15g0085021 Lupinus albus HOM05D003263 ORTHO05D004801 2.5e-177 626.7 676 49.1
vmacro18524 Vaccinium macrocarpon HOM05D003263 ORTHO05D004801 1.4e-175 620.9 674 49.0
CDE05G1041 Ceratophyllum demersum HOM05D003263 ORTHO05D004801 3.0e-167 593.2 676 47.0
Nn4g24447 Nelumbo nucifera HOM05D003263 ORTHO05D004801 2.0e-166 590.5 546 53.5
Dinv28178 Davidia involucrata HOM05D003263 ORTHO05D004801 4.8e-157 559.3 674 45.3
MBI19_g09384_MAGBIO Magnolia biondii HOM05D003263 ORTHO05D004801 4.2e-153 546.2 991 34.3
arahy.Tifrunner.gnm1.ann1.5H82NF Arachis hypogaea HOM05D003263 ORTHO05D004801 8.8e-151 538.5 601 47.8
arahy.Tifrunner.gnm1.ann1.RIP12T Arachis hypogaea HOM05D003263 ORTHO05D004801 3.5e-147 526.6 601 47.4
SpUN1596_0010 Schrenkiella parvula HOM05D003263 ORTHO05D004801 1.0e-106 392.1 312 58.7
Oeu062704.1 Olea europaea HOM05D003263 ORTHO05D004801 9.9e-102 375.6 241 70.5
TAR371G0371 Trochodendron aralioides HOM05D003263 ORTHO05D004801 1.0e-90 339.0 598 35.8
Thecc.K0008100 Theobroma cacao HOM05D003263 ORTHO05D004801 1.8e-90 338.2 219 69.9
arahy.Tifrunner.gnm1.ann1.Z93KCA Arachis hypogaea HOM05D003263 ORTHO05D004801 6.4e-85 319.7 306 52.0
arahy.Tifrunner.gnm1.ann1.HY7M04 Arachis hypogaea HOM05D000164 ORTHO05D004801 2.3e-66 258.1 368 39.1
Haze_27240 Corylus avellana HOM05D003263 ORTHO05D004801 1.9e-60 238.4 377 37.7
Eucgr.J01637 Eucalyptus grandis HOM05D003263 ORTHO05D004801 4.5e-54 217.2 143 69.9
Oeu062706.1 Olea europaea HOM05D003263 ORTHO05D004801 1.2e-51 209.1 311 38.9
arahy.Tifrunner.gnm1.ann1.VKQW11 Arachis hypogaea HOM05D003263 ORTHO05D004801 2.3e-50 204.9 125 73.6
SpUn1854_0010 Schrenkiella parvula HOM05D003263 ORTHO05D004801 2.6e-46 191.4 299 37.5
arahy.Tifrunner.gnm1.ann1.SN393R Arachis hypogaea HOM05D003263 ORTHO05D004801 1.1e-44 186.0 114 73.7
Potri.017G136950 Populus trichocarpa HOM05D003263 ORTHO05D004801 4.0e-42 177.6 241 43.2
SEGI_21193 Sequoiadendron giganteum HOM05D003263 ORTHO05D004801 3.3e-41 174.5 115 70.4
SEGI_05320 Sequoiadendron giganteum HOM05D003263 ORTHO05D004801 1.2e-35 156.0 104 70.2
CSS0049015 Camellia sinensis var. sinensis HOM05D003263 ORTHO05D004801 4.0e-34 151.0 305 36.4
CBR_g44347 Chara braunii HOM05D003263 ORTHO05D004801 2.6e-33 148.3 144 52.8
CSS0039899 Camellia sinensis var. sinensis HOM05D003263 ORTHO05D004801 3.4e-33 147.9 305 35.4
MD16G1264300 Malus domestica HOM05D003263 ORTHO05D004801 2.3e-29 135.2 268 33.2
SEGI_04560 Sequoiadendron giganteum HOM05D003263 ORTHO05D004801 2.3e-29 135.2 149 48.3
Oeu039332.1 Olea europaea HOM05D003263 ORTHO05D004801 5.0e-29 134.0 160 44.4
Thecc.K0008200 Theobroma cacao HOM05D003263 ORTHO05D004801 1.1e-28 132.9 226 35.4
Sabra17G0054900 Salix brachista HOM05D003263 ORTHO05D004801 3.0e-26 124.8 245 33.5
Actinidia28797 Actinidia chinensis HOM05D003263 ORTHO05D004801 9.2e-23 113.2 152 42.8
CBR_g26339 Chara braunii HOM05D004987 ORTHO05D005960 1.7e-21 109.0 224 27.7
Ca_19082_v3 Cicer arietinum L. HOM05D003263 ORTHO05D004801 4.3e-20 104.4 81 59.3
MD16G1264400 Malus domestica HOM05D003263 ORTHO05D004801 8.0e-19 100.1 61 70.5
Hund13091 Selenicereus undatus HOM05D003263 ORTHO05D004801 2.6e-17 95.1 103 45.6
VMungo0647G1524 Vigna mungo HOM05D003263 ORTHO05D004801 2.6e-17 95.1 98 46.9
HanXRQChr17g0559491 Helianthus annuus HOM05D003263 ORTHO05D004801 1.8e-15 89.0 58 67.2
QL04p097132 Quercus lobata HOM05D003263 ORTHO05D000041 7.0e-15 87.0 59 64.4
Hma1.2p1_1425F.1_g282850 Hydrangea macrophylla HOM05D003263 ORTHO05D004801 5.0e-13 80.9 99 43.4
Sabra17G0112400 Salix brachista HOM05D003263 ORTHO05D003497 2.5e-12 78.6 128 39.1
CSS0022568 Camellia sinensis var. sinensis HOM05D003263 ORTHO05D004801 3.6e-11 74.7 47 70.2
TPR.G18971 Trifolium pratense HOM05D003263 ORTHO05D004801 8.0e-11 73.6 54 64.8
QL08p053439 Quercus lobata HOM05D003263 ORTHO05D004801 5.8e-09 67.4 47 59.6
Cc04_g05630 Coffea canephora HOM05D003263 ORTHO05D004801 1.3e-08 66.2 53 58.5
Cc00_g06720 Coffea canephora HOM05D003263 ORTHO05D004801 6.4e-08 63.9 38 78.9
TPR.G11234 Trifolium pratense HOM05D003263 ORTHO05D004801 8.3e-08 63.5 42 66.7
SEGI_40032 Sequoiadendron giganteum HOM05D003263 ORTHO05D024792 1.4e-07 62.8 50 58.0


User provided reference genes

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