Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa025624 Carpinus fangiana HOM05D004389 ORTHO05D125512 6.6e-131 470.7 237 100.0
RcHm_v2.0_Chr3g0454251 Rosa chinensis HOM05D004389 ORTHO05D005457 5.4e-16 89.0 216 34.3
DCAR_008416 Daucus carota HOM05D004389 ORTHO05D005457 7.1e-16 88.6 218 34.4
Eucgr.H04472 Eucalyptus grandis HOM05D004389 ORTHO05D005457 9.3e-16 88.2 221 35.3
FAN05G1752 Fragaria x ananassa HOM05D004389 ORTHO05D005457 1.6e-15 87.4 216 32.9
ClCG03G016830 Citrullus lanatus HOM05D004389 ORTHO05D005457 2.7e-15 86.7 221 34.8
MELO3C015339.2 Cucumis melo HOM05D004389 ORTHO05D005457 2.7e-15 86.7 221 34.8
TAR626G0408 Trochodendron aralioides HOM05D004389 ORTHO05D005457 2.7e-15 86.7 221 33.0
Nn8g41138 Nelumbo nucifera HOM05D004389 ORTHO05D005457 3.5e-15 86.3 226 31.9
CsaV3_1G039140 Cucumis sativus L. HOM05D004389 ORTHO05D005457 7.8e-15 85.1 221 34.8
Lj7A473T46 Lonicera japonica HOM05D004389 ORTHO05D005457 1.3e-14 84.3 225 32.0
MD04G1208300 Malus domestica HOM05D004389 ORTHO05D005457 1.3e-14 84.3 216 34.3
FAN09G0842 Fragaria x ananassa HOM05D004389 ORTHO05D005457 1.7e-14 84.0 216 33.3
vmacro19638 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 2.3e-14 83.6 217 33.6
Haze_23899 Corylus avellana HOM05D004389 ORTHO05D005457 3.0e-14 83.2 217 32.3
FAN14G5008 Fragaria x ananassa HOM05D004389 ORTHO05D005457 3.0e-14 83.2 216 32.4
MBI16_g00840_MAGBIO Magnolia biondii HOM05D004389 ORTHO05D005457 3.0e-14 83.2 221 34.4
AagrBONN_evm.TU.Sc2ySwM_117.3666 Anthoceros agrestis HOM05D004389 ORTHO05D005457 3.9e-14 82.8 230 32.2
Cre13.g585850 Chlamydomonas reinhardtii HOM05D004389 ORTHO05D005457 3.9e-14 82.8 222 31.1
QL03p004595 Quercus lobata HOM05D004389 ORTHO05D005457 3.9e-14 82.8 223 32.7
Cpa.g.sc58.76 Carica papaya HOM05D004389 ORTHO05D005457 6.6e-14 82.0 224 31.2
Dinv23968 Davidia involucrata HOM05D004389 ORTHO05D005457 6.6e-14 82.0 218 33.5
FAN05G0500 Fragaria x ananassa HOM05D004389 ORTHO05D005457 6.6e-14 82.0 216 31.9
Hma1.2p1_0666F.1_g199560 Hydrangea macrophylla HOM05D004389 ORTHO05D005457 6.6e-14 82.0 223 31.8
Hma1.2p1_1362F.1_g278175 Hydrangea macrophylla HOM05D004389 ORTHO05D005457 6.6e-14 82.0 223 31.8
FAN18G1342 Fragaria x ananassa HOM05D004389 ORTHO05D005457 1.1e-13 81.3 218 33.0
Sabra13G0026700 Salix brachista HOM05D004389 ORTHO05D005457 1.5e-13 80.9 227 33.5
Sc16g0008410 Simmondsia chinensis HOM05D004389 ORTHO05D005457 1.9e-13 80.5 217 33.2
SGA_v2.0_scaffold11G05813 Striga asiatica HOM05D004389 ORTHO05D005457 1.9e-13 80.5 175 36.0
FAN05G0231 Fragaria x ananassa HOM05D004389 ORTHO05D005457 2.5e-13 80.1 216 32.9
FAN05G0672 Fragaria x ananassa HOM05D004389 ORTHO05D005457 2.5e-13 80.1 216 32.9
Lj9C683G9 Lonicera japonica HOM05D004389 ORTHO05D005457 2.5e-13 80.1 225 31.6
Nitab4.5_0002659g0010 Nicotiana tabacum HOM05D004389 ORTHO05D005457 2.5e-13 80.1 218 32.6
SGA_v2.0_scaffold16G07733 Striga asiatica HOM05D004389 ORTHO05D005457 2.5e-13 80.1 173 36.4
TAR383G0075 Trochodendron aralioides HOM05D004389 ORTHO05D005457 2.5e-13 80.1 175 34.9
Sed0018697 Sechium edule HOM05D004389 ORTHO05D005457 3.3e-13 79.7 190 34.2
GSVIVG01006266001 Vitis vinifera HOM05D004389 ORTHO05D005457 3.3e-13 79.7 212 32.5
Migut.N00707 Erythranthe guttata HOM05D004389 ORTHO05D005457 4.3e-13 79.3 217 33.2
Phvul.007G101500 Phaseolus vulgaris HOM05D004389 ORTHO05D005457 4.3e-13 79.3 223 31.4
Potri.013G025600 Populus trichocarpa HOM05D004389 ORTHO05D005457 4.3e-13 79.3 218 30.7
Thecc.05G307100 Theobroma cacao HOM05D004389 ORTHO05D005457 4.3e-13 79.3 224 30.8
CANSAT21G2311 Cannabis sativa HOM05D004389 ORTHO05D005457 5.6e-13 79.0 216 31.5
Glyma.06G240600 Glycine max HOM05D004389 ORTHO05D005457 5.6e-13 79.0 216 32.4
Lj1g0012007 Lotus japonicus HOM05D004389 ORTHO05D005457 5.6e-13 79.0 216 32.4
Oeu045484.1 Olea europaea HOM05D004389 ORTHO05D005457 5.6e-13 79.0 175 36.0
vmacro08924 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 5.6e-13 79.0 239 31.4
Actinidia05713 Actinidia chinensis HOM05D004389 ORTHO05D005457 7.3e-13 78.6 216 32.4
CiPaw.07G015300 Carya illinoinensis HOM05D004389 ORTHO05D005457 7.3e-13 78.6 217 32.3
Prupe.6G329200 Prunus persica HOM05D004389 ORTHO05D005457 7.3e-13 78.6 216 33.3
Rhsim05G0010600 Rhododendron simsii HOM05D004389 ORTHO05D005457 7.3e-13 78.6 214 33.2
Cfa006553 Carpinus fangiana HOM05D004389 ORTHO05D003318 9.6e-13 78.2 216 30.1
LjContig00312_ERROPOS870357g0027537 Lotus japonicus HOM05D004389 ORTHO05D005457 9.6e-13 78.2 216 32.4
Manes.09G078200 Manihot esculenta HOM05D004389 ORTHO05D005457 9.6e-13 78.2 217 33.6
PSO063G2909 Papaver somniferum HOM05D004389 ORTHO05D005457 9.6e-13 78.2 216 31.5
TWI73G0431 Tripterygium wilfordii HOM05D004389 ORTHO05D005457 9.6e-13 78.2 216 33.8
Zm00001eb264580 Zea mays HOM05D004389 ORTHO05D005457 9.6e-13 78.2 212 34.9
Ah.04g159790 Amaranthus hybridus HOM05D004389 ORTHO05D005457 1.3e-12 77.8 216 32.4
Haze_04228 Corylus avellana HOM05D004389 ORTHO05D005457 1.3e-12 77.8 218 31.7
Mapoly0013s0083 Marchantia polymorpha HOM05D004389 ORTHO05D005457 1.3e-12 77.8 218 30.3
PGSC0003DMG402007838 Solanum tuberosum HOM05D004389 ORTHO05D005457 1.3e-12 77.8 218 33.9
AagrBONN_evm.TU.Sc2ySwM_344.4143 Anthoceros agrestis HOM05D007251 ORTHO05D009266 1.6e-12 77.4 162 34.6
CSS0010710 Camellia sinensis var. sinensis HOM05D004389 ORTHO05D005457 1.6e-12 77.4 217 32.3
Nitab4.5_0000401g0080 Nicotiana tabacum HOM05D004389 ORTHO05D005457 1.6e-12 77.4 216 32.4
Rhsim05G0143800 Rhododendron simsii HOM05D004389 ORTHO05D005457 1.6e-12 77.4 218 32.1
Sopen12g004700 Solanum pennellii HOM05D004389 ORTHO05D005457 1.6e-12 77.4 218 32.1
CANSAT21G1920 Cannabis sativa HOM05D004389 ORTHO05D005457 2.1e-12 77.0 232 30.6
Ciclev10018002m.g Citrus clementina HOM05D004389 ORTHO05D005457 2.1e-12 77.0 224 31.2
Duzib177G0146 Durio zibethinus HOM05D004389 ORTHO05D005457 2.1e-12 77.0 225 31.6
Nitab4.5_0002329g0100 Nicotiana tabacum HOM05D004389 ORTHO05D005457 2.1e-12 77.0 218 31.7
Potri.005G036500 Populus trichocarpa HOM05D004389 ORTHO05D005457 2.1e-12 77.0 218 31.7
Aqoxy7G01925 Aquilegia oxysepala HOM05D004389 ORTHO05D005457 2.8e-12 76.6 171 34.5
Ciclev10002655m.g Citrus clementina HOM05D004389 ORTHO05D005457 2.8e-12 76.6 217 31.3
ECA236G1487 Erigeron canadensis HOM05D004389 ORTHO05D005457 2.8e-12 76.6 217 32.3
Solyc12g009810.3 Solanum lycopersicum HOM05D004389 ORTHO05D005457 2.8e-12 76.6 218 31.7
TPR.G33525 Trifolium pratense HOM05D004389 ORTHO05D005457 2.8e-12 76.6 216 30.6
EL10Ac4g09330 Beta vulgaris HOM05D004389 ORTHO05D005457 3.6e-12 76.3 217 32.7
BraA01t01985Z Brassica rapa HOM05D004389 ORTHO05D005457 3.6e-12 76.3 223 30.5
Cc02_g33710 Coffea canephora HOM05D004389 ORTHO05D005457 3.6e-12 76.3 216 31.5
FvH4_5g27531 Fragaria vesca HOM05D004389 ORTHO05D005457 3.6e-12 76.3 172 36.0
HanXRQChr14g0460141 Helianthus annuus HOM05D004389 ORTHO05D005457 3.6e-12 76.3 222 31.1
PGSC0003DMG400030976 Solanum tuberosum HOM05D004389 ORTHO05D005457 3.6e-12 76.3 221 32.1
arahy.Tifrunner.gnm1.ann1.95MSG7 Arachis hypogaea HOM05D004389 ORTHO05D005457 4.8e-12 75.9 217 33.2
CDE02G2165 Ceratophyllum demersum HOM05D004389 ORTHO05D005457 4.8e-12 75.9 173 35.3
AUR62005084 Chenopodium quinoa HOM05D004389 ORTHO05D005457 4.8e-12 75.9 218 33.0
Gohir.A08G211800 Gossypium hirsutum HOM05D004389 ORTHO05D005457 4.8e-12 75.9 223 30.0
PGR031G3032 Punica granatum HOM05D004389 ORTHO05D005457 4.8e-12 75.9 216 32.4
SEGI_15909 Sequoiadendron giganteum HOM05D004389 ORTHO05D005457 4.8e-12 75.9 162 36.4
THA.LOC104805865 Tarenaya hassleriana HOM05D004389 ORTHO05D005457 4.8e-12 75.9 173 33.5
Thhalv10026361m.g Eutrema salsugineum HOM05D004389 ORTHO05D005457 6.2e-12 75.5 226 31.0
FvH4_6g05471 Fragaria vesca HOM05D004389 ORTHO05D005457 6.2e-12 75.5 216 31.9
unitig_747.g21568 Utricularia gibba HOM05D004389 ORTHO05D005457 6.2e-12 75.5 161 37.9
A01p20570 Brassica napus HOM05D004389 ORTHO05D005457 8.1e-12 75.1 223 30.9
COL.COLO4_29544 Corchorus olitorius HOM05D004389 ORTHO05D005457 8.1e-12 75.1 218 30.7
Glyma.05G086900 Glycine max HOM05D004389 ORTHO05D005457 8.1e-12 75.1 215 31.6
Medtr3g115100 Medicago truncatula HOM05D004389 ORTHO05D005457 8.1e-12 75.1 216 32.4
HPP92_010418 Vanilla planifolia HOM05D004389 ORTHO05D005457 8.1e-12 75.1 185 33.5
COL.COLO4_19842 Corchorus olitorius HOM05D004389 ORTHO05D005457 1.1e-11 74.7 217 30.9
PSO782G4098 Papaver somniferum HOM05D004389 ORTHO05D005457 1.1e-11 74.7 216 32.4
Pp3c11_4930 Physcomitrium patens HOM05D004389 ORTHO05D005457 1.1e-11 74.7 211 30.8
Zm00001eb272600 Zea mays HOM05D004389 ORTHO05D005457 1.1e-11 74.7 212 33.0
ATR0626G001 Amborella trichopoda HOM05D004389 ORTHO05D005457 1.4e-11 74.3 171 35.7
BolC1t02532H Brassica oleracea HOM05D004389 ORTHO05D005457 1.4e-11 74.3 223 30.5
Sabra05G0037000 Salix brachista HOM05D004389 ORTHO05D005457 1.4e-11 74.3 173 35.8
Sp7g15350 Schrenkiella parvula HOM05D004389 ORTHO05D005457 1.4e-11 74.3 230 30.4
SMO171G0140 Selaginella moellendorffii HOM05D004389 ORTHO05D005457 1.8e-11 73.9 170 35.3
BcaB03g14176 Brassica carinata HOM05D004389 ORTHO05D005457 2.4e-11 73.6 223 30.5
Gorai.004G242800 Gossypium raimondii HOM05D004389 ORTHO05D005457 2.4e-11 73.6 224 29.5
BcaC09g50404 Brassica carinata HOM05D004389 ORTHO05D005457 3.1e-11 73.2 223 30.0
C01p25870 Brassica napus HOM05D004389 ORTHO05D005457 3.1e-11 73.2 216 30.6
GSVIVG01000019001 Vitis vinifera HOM05D004389 ORTHO05D005457 3.1e-11 73.2 174 35.1
BcaNung00158 Brassica carinata HOM05D004389 ORTHO05D005457 6.9e-11 72.0 216 30.6
Gohir.D08G228501 Gossypium hirsutum HOM05D004389 ORTHO05D005457 6.9e-11 72.0 228 29.8
HanXRQChr04g0126711 Helianthus annuus HOM05D004389 ORTHO05D005457 6.9e-11 72.0 161 34.2
Lalb_Chr05g0219701 Lupinus albus HOM05D004389 ORTHO05D005457 6.9e-11 72.0 166 34.9
CARHR223240 Cardamine hirsuta HOM05D004389 ORTHO05D005457 9.0e-11 71.6 216 31.0
AUR62006921 Chenopodium quinoa HOM05D004389 ORTHO05D005457 1.2e-10 71.2 224 30.8
AUR62000890 Chenopodium quinoa HOM05D004389 ORTHO05D005457 1.5e-10 70.9 216 31.5
Duzib128G0997 Durio zibethinus HOM05D004389 ORTHO05D005457 1.5e-10 70.9 218 30.3
Hund07052 Selenicereus undatus HOM05D004389 ORTHO05D005457 1.5e-10 70.9 216 31.5
Aa31sc17G40 Aethionema arabicum HOM05D004389 ORTHO05D005457 2.0e-10 70.5 161 34.8
CSS0006579 Camellia sinensis var. sinensis HOM05D004389 ORTHO05D005457 2.0e-10 70.5 217 30.0
Carub.0007s2468 Capsella rubella HOM05D004389 ORTHO05D005457 3.4e-10 69.7 230 28.7
CBR_g24390 Chara braunii HOM05D004389 ORTHO05D005457 4.4e-10 69.3 213 30.0
AL7G38020 Arabidopsis lyrata HOM05D004389 ORTHO05D005457 5.8e-10 68.9 216 29.6
Medtr3g096610 Medicago truncatula HOM05D004389 ORTHO05D005457 5.8e-10 68.9 216 30.6
Atru.chr2.467 Acer truncatum HOM05D004389 ORTHO05D005457 7.6e-10 68.6 216 30.6
PRCOL_00003734 Prasinoderma coloniale HOM05D004389 ORTHO05D005457 9.9e-10 68.2 163 33.7
Lsat_1_v5_gn_7_96081 Lactuca sativa HOM05D004389 ORTHO05D005457 1.3e-09 67.8 216 31.9
Aa31sc17G90 Aethionema arabicum HOM05D004389 ORTHO05D005457 2.2e-09 67.0 161 33.5
Peaxi162Scf00523g00530 Petunia axillaris HOM05D004389 ORTHO05D005457 2.2e-09 67.0 218 30.7
TWI53G0891 Tripterygium wilfordii HOM05D004389 ORTHO05D005457 2.2e-09 67.0 216 30.1
RcHm_v2.0_Chr7g0218901 Rosa chinensis HOM05D004389 ORTHO05D005457 3.8e-09 66.2 189 32.8
AT4G16710 Arabidopsis thaliana HOM05D004389 ORTHO05D005457 4.9e-09 65.9 216 29.2
AUR62000567 Chenopodium quinoa HOM05D004389 ORTHO05D005457 3.2e-08 63.2 163 33.7
MCO09G816 Micromonas commoda HOM05D004389 ORTHO05D005457 9.3e-08 61.6 166 31.9
Dinv40263 Davidia involucrata HOM05D004389 ORTHO05D005457 7.9e-07 58.5 106 38.7
vmacro22564 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 1.0e-06 58.2 93 40.9
Ca_16978_v3 Cicer arietinum L. HOM05D004389 ORTHO05D005457 3.0e-06 56.6 92 39.1
Zm00001eb058290 Zea mays HOM05D004389 ORTHO05D005457 5.1e-06 55.8 91 40.7
Aqoxy4G02160 Aquilegia oxysepala HOM05D004389 ORTHO05D005457 8.7e-06 55.1 75 46.7


User provided reference genes

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