Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa025227 Carpinus fangiana HOM05D007498 ORTHO05D009384 1.8e-287 991.9 505 100.0
Pp3c17_21590 Physcomitrium patens HOM05D007498 ORTHO05D009384 1.3e-14 85.5 305 25.6
Actinidia13735 Actinidia chinensis HOM05D007498 ORTHO05D009384 3.7e-14 84.0 337 27.9
Actinidia09741 Actinidia chinensis HOM05D007498 ORTHO05D009384 8.3e-14 82.8 337 27.9
Ciclev10015493m.g Citrus clementina HOM05D007498 ORTHO05D009384 2.4e-13 81.3 299 28.1
PSO541G2474 Papaver somniferum HOM05D007498 ORTHO05D009384 9.2e-13 79.3 339 27.7
SMO146G0054 Selaginella moellendorffii HOM05D007498 ORTHO05D009384 9.2e-13 79.3 349 24.9
SEGI_23048 Sequoiadendron giganteum HOM05D007498 ORTHO05D009384 2.7e-12 77.8 298 23.2
GSVIVG01030496001 Vitis vinifera HOM05D007498 ORTHO05D009384 3.5e-12 77.4 334 25.4
Mapoly0005s0243 Marchantia polymorpha HOM05D007498 ORTHO05D009384 4.5e-12 77.0 269 27.5
Nn1g03383 Nelumbo nucifera HOM05D007498 ORTHO05D009384 5.9e-12 76.6 305 27.2
MBI19_g41387_MAGBIO Magnolia biondii HOM05D007498 ORTHO05D009384 1.0e-11 75.9 370 24.9
Hma1.2p1_0445F.1_g154420 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 1.3e-11 75.5 305 25.2
Hma1.2p1_2381F.1_g320980 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 1.3e-11 75.5 305 25.2
PSO675G1300 Papaver somniferum HOM05D007498 ORTHO05D009384 1.7e-11 75.1 351 27.6
Dinv08726 Davidia involucrata HOM05D007498 ORTHO05D009384 2.3e-11 74.7 305 26.9
Cc05_g03070 Coffea canephora HOM05D007498 ORTHO05D009384 2.9e-11 74.3 336 24.7
Peaxi162Scf00100g01524 Petunia axillaris HOM05D007498 ORTHO05D009384 5.0e-11 73.6 336 26.2
Solyc05g042050.4 Solanum lycopersicum HOM05D007498 ORTHO05D009384 6.6e-11 73.2 342 25.1
PGR042G1731 Punica granatum HOM05D007498 ORTHO05D009384 8.6e-11 72.8 345 24.9
Sopen05g026100 Solanum pennellii HOM05D007498 ORTHO05D009384 1.1e-10 72.4 342 24.9
CSS0038240 Camellia sinensis var. sinensis HOM05D007498 ORTHO05D009384 1.5e-10 72.0 335 25.1
HanXRQChr12g0373631 Helianthus annuus HOM05D007498 ORTHO05D009384 2.5e-10 71.2 320 23.8
Nitab4.5_0006063g0010 Nicotiana tabacum HOM05D007498 ORTHO05D009384 2.5e-10 71.2 337 24.9
ATR0059G023 Amborella trichopoda HOM05D007498 ORTHO05D009384 3.3e-10 70.9 295 25.4
Sp3g24210 Schrenkiella parvula HOM05D007498 ORTHO05D009384 4.3e-10 70.5 280 23.2
Manes.12G070200 Manihot esculenta HOM05D007498 ORTHO05D009384 9.5e-10 69.3 300 25.3
TAR629G3061 Trochodendron aralioides HOM05D007498 ORTHO05D009384 9.5e-10 69.3 339 25.1
CiPaw.03G155900 Carya illinoinensis HOM05D007498 ORTHO05D009384 1.2e-09 68.9 280 24.6
Nitab4.5_0000019g0370 Nicotiana tabacum HOM05D007498 ORTHO05D009384 1.2e-09 68.9 336 25.0
Sed0020195 Sechium edule HOM05D007498 ORTHO05D009384 1.2e-09 68.9 418 22.7
CARHR103340 Cardamine hirsuta HOM05D007498 ORTHO05D009384 1.6e-09 68.6 271 24.4
CANSAT64G1398 Cannabis sativa HOM05D007498 ORTHO05D009384 2.8e-09 67.8 326 23.3
Carub.0003s2696 Capsella rubella HOM05D007498 ORTHO05D009384 2.8e-09 67.8 312 23.4
AL3G43270 Arabidopsis lyrata HOM05D007498 ORTHO05D009384 3.6e-09 67.4 280 23.2
QL08p030918 Quercus lobata HOM05D007498 ORTHO05D009384 3.6e-09 67.4 360 24.7
Sc21g0001170 Simmondsia chinensis HOM05D007498 ORTHO05D009384 4.7e-09 67.0 395 25.6
Aa31LG8G11370 Aethionema arabicum HOM05D007498 ORTHO05D009384 6.1e-09 66.6 304 23.7
AagrBONN_evm.TU.Sc2ySwM_344.4295 Anthoceros agrestis HOM05D007498 ORTHO05D009384 8.0e-09 66.2 296 25.7
Aqoxy1G04193 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 1.0e-08 65.9 276 26.4
Lj1A780G53 Lonicera japonica HOM05D007498 ORTHO05D009384 1.4e-08 65.5 167 29.9
Lsat_1_v5_gn_5_123880 Lactuca sativa HOM05D007498 ORTHO05D009384 1.8e-08 65.1 304 24.7
AT2G05755 Arabidopsis thaliana HOM05D007498 ORTHO05D009384 2.3e-08 64.7 280 23.2
CsaV3_6G037690 Cucumis sativus L. HOM05D007498 ORTHO05D009384 2.3e-08 64.7 283 23.7
FvH4_6g42420 Fragaria vesca HOM05D007498 ORTHO05D009384 1.5e-07 62.0 294 22.1
A03p44690 Brassica napus HOM05D007498 ORTHO05D009384 2.0e-07 61.6 268 25.0
vmacro12166 Vaccinium macrocarpon HOM05D007498 ORTHO05D009384 2.6e-07 61.2 329 27.7
BolC3t17828H Brassica oleracea HOM05D000228 ORTHO05D001122 3.4e-07 60.8 267 25.5
BraA03t13603Z Brassica rapa HOM05D007498 ORTHO05D009384 3.4e-07 60.8 267 25.5
C03p55520 Brassica napus HOM05D007498 ORTHO05D009384 4.4e-07 60.5 268 25.0
BcaB08g34508 Brassica carinata HOM05D007498 ORTHO05D009384 5.7e-07 60.1 269 22.7
FAN05G5059 Fragaria x ananassa HOM05D007498 ORTHO05D009384 5.7e-07 60.1 295 23.1
Thecc.01G181300 Theobroma cacao HOM05D007498 ORTHO05D009384 5.7e-07 60.1 316 23.7
ECA234G3795 Erigeron canadensis HOM05D007498 ORTHO05D009384 7.5e-07 59.7 158 30.4
TWI18G0826 Tripterygium wilfordii HOM05D007498 ORTHO05D009384 7.5e-07 59.7 304 25.0
BcaC01g03153 Brassica carinata HOM05D007498 ORTHO05D009384 9.8e-07 59.3 268 25.0
THA.LOC104815344 Tarenaya hassleriana HOM05D007498 ORTHO05D009384 9.8e-07 59.3 282 24.1
Cre06.g286200 Chlamydomonas reinhardtii HOM05D024201 ORTHO05D009384 1.3e-06 58.9 294 24.8
Eucgr.A01096 Eucalyptus grandis HOM05D007498 ORTHO05D009384 2.2e-06 58.2 304 25.0
DCAR_019260 Daucus carota HOM05D007498 ORTHO05D001133 4.9e-06 57.0 121 33.1
RcHm_v2.0_Chr2g0158311 Rosa chinensis HOM05D007498 ORTHO05D009384 4.9e-06 57.0 130 28.5


User provided reference genes

Program Settings