Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa025118 Carpinus fangiana HOM05D004498 ORTHO05D005300 1.1e-123 446.8 248 100.0
SalBow7G0508 Salvia bowleyana HOM05D004498 ORTHO05D005300 7.9e-10 68.6 195 31.8
Atru.chr1.817 Acer truncatum HOM05D004498 ORTHO05D005300 2.3e-09 67.0 194 29.4
Migut.G01103 Erythranthe guttata HOM05D004498 ORTHO05D005300 3.9e-09 66.2 197 32.0
Thhalv10013248m.g Eutrema salsugineum HOM05D004498 ORTHO05D005300 3.9e-09 66.2 189 30.2
Sp6g35240 Schrenkiella parvula HOM05D004498 ORTHO05D005300 3.9e-09 66.2 189 30.2
AL3G21620 Arabidopsis lyrata HOM05D004498 ORTHO05D005300 5.1e-09 65.9 177 31.1
BcaB05g21603 Brassica carinata HOM05D004498 ORTHO05D005300 5.1e-09 65.9 181 30.9
BcaC03g13193 Brassica carinata HOM05D004498 ORTHO05D005300 5.1e-09 65.9 189 30.7
C02p03220 Brassica napus HOM05D004498 ORTHO05D005300 5.1e-09 65.9 182 30.8
Migut.D02110 Erythranthe guttata HOM05D004498 ORTHO05D005300 5.1e-09 65.9 195 32.3
Hma1.2p1_0432F.1_g151900 Hydrangea macrophylla HOM05D004498 ORTHO05D005300 5.1e-09 65.9 194 30.9
Sed0003630 Sechium edule HOM05D004498 ORTHO05D005300 1.1e-08 64.7 188 30.9
Gohir.A12G197600 Gossypium hirsutum HOM05D004498 ORTHO05D005300 1.5e-08 64.3 193 31.1
THA.LOC104819414 Tarenaya hassleriana HOM05D004498 ORTHO05D005300 2.0e-08 63.9 189 29.1
ClCG07G016840 Citrullus lanatus HOM05D004498 ORTHO05D005300 2.6e-08 63.5 188 30.3
Gohir.D12G200100 Gossypium hirsutum HOM05D004498 ORTHO05D005300 2.6e-08 63.5 186 31.2
Gorai.008G215300 Gossypium raimondii HOM05D004498 ORTHO05D005300 3.3e-08 63.2 194 30.9
ATR0745G086 Amborella trichopoda HOM05D004498 ORTHO05D005300 5.7e-08 62.4 188 30.9
BcaC06g32495 Brassica carinata HOM05D004498 ORTHO05D005300 5.7e-08 62.4 189 29.6
HanXRQChr05g0142551 Helianthus annuus HOM05D004498 ORTHO05D005300 7.4e-08 62.0 189 29.1
BolC2t06286H Brassica oleracea HOM05D004498 ORTHO05D005300 9.7e-08 61.6 158 31.0
CiPaw.03G020300 Carya illinoinensis HOM05D004498 ORTHO05D005300 9.7e-08 61.6 189 28.6
Nn1g09651 Nelumbo nucifera HOM05D004498 ORTHO05D005300 9.7e-08 61.6 214 29.4
Os07g0486100 Oryza sativa ssp. japonica HOM05D004498 ORTHO05D005300 1.3e-07 61.2 178 31.5
vmacro22807 Vaccinium macrocarpon HOM05D004498 ORTHO05D005300 1.3e-07 61.2 194 28.9
Cc02_g04430 Coffea canephora HOM05D004498 ORTHO05D005300 1.7e-07 60.8 190 31.1
Carub.0003s0947 Capsella rubella HOM05D004498 ORTHO05D005300 2.2e-07 60.5 175 29.7
Oeu022469.1 Olea europaea HOM05D004498 ORTHO05D005300 2.2e-07 60.5 208 28.4
A10p29360 Brassica napus HOM05D004498 ORTHO05D005300 2.8e-07 60.1 189 30.2
BraA02t04927Z Brassica rapa HOM05D004498 ORTHO05D005300 2.8e-07 60.1 158 30.4
MELO3C017661.2 Cucumis melo HOM05D004498 ORTHO05D005300 2.8e-07 60.1 188 30.3
BraA10t44979Z Brassica rapa HOM05D004498 ORTHO05D005300 3.7e-07 59.7 189 30.2
PSO210G1345 Papaver somniferum HOM05D004498 ORTHO05D005300 3.7e-07 59.7 189 28.6
Thecc.03G153100 Theobroma cacao HOM05D004498 ORTHO05D005300 3.7e-07 59.7 190 31.1
Carub.0006s0661 Capsella rubella HOM05D004498 ORTHO05D005300 4.8e-07 59.3 189 30.2
Cfa008145 Carpinus fangiana HOM05D004498 ORTHO05D005300 4.8e-07 59.3 189 29.6
Ciclev10004737m.g Citrus clementina HOM05D004498 ORTHO05D005300 6.3e-07 58.9 191 28.8
ECA233G4878 Erigeron canadensis HOM05D004498 ORTHO05D005300 6.3e-07 58.9 189 31.2
Prupe.6G033300 Prunus persica HOM05D004498 ORTHO05D005300 6.3e-07 58.9 198 31.8
TAR375G0984 Trochodendron aralioides HOM05D004498 ORTHO05D005300 6.3e-07 58.9 189 28.6
CsaV3_4G004040 Cucumis sativus L. HOM05D004498 ORTHO05D005300 8.2e-07 58.5 190 31.6
PSO210G0611 Papaver somniferum HOM05D004498 ORTHO05D005300 8.2e-07 58.5 189 28.0
Solyc05g051630.4 Solanum lycopersicum HOM05D004498 ORTHO05D005300 8.2e-07 58.5 189 28.6
Glyma.09G230400 Glycine max HOM05D004498 ORTHO05D005300 1.1e-06 58.2 193 29.5
Sc15g0000230 Simmondsia chinensis HOM05D004498 ORTHO05D005300 1.4e-06 57.8 186 29.6
Actinidia24991 Actinidia chinensis HOM05D004498 ORTHO05D005300 1.8e-06 57.4 189 29.1
AT5G07630 Arabidopsis thaliana HOM05D004498 ORTHO05D005300 1.8e-06 57.4 182 28.6
Lj8A44G33 Lonicera japonica HOM05D004498 ORTHO05D005300 1.8e-06 57.4 181 28.2
Potri.001G126200 Populus trichocarpa HOM05D004498 ORTHO05D005300 1.8e-06 57.4 190 30.0
HPP92_003455 Vanilla planifolia HOM05D004498 ORTHO05D005300 1.8e-06 57.4 200 24.0
COL.COLO4_14097 Corchorus olitorius HOM05D004498 ORTHO05D005300 3.1e-06 56.6 190 30.0
Migut.G01144 Erythranthe guttata HOM05D004498 ORTHO05D005300 3.1e-06 56.6 159 32.7
Lalb_Chr04g0258171 Lupinus albus HOM05D004498 ORTHO05D005300 3.1e-06 56.6 189 28.6
Aa31LG3G18790 Aethionema arabicum HOM05D004498 ORTHO05D005300 4.1e-06 56.2 181 27.1
Ah.15g094140 Amaranthus hybridus HOM05D004498 ORTHO05D005300 4.1e-06 56.2 190 28.4
arahy.Tifrunner.gnm1.ann1.LBI7WJ Arachis hypogaea HOM05D004498 ORTHO05D005300 4.1e-06 56.2 160 30.6
Lj3g0015680 Lotus japonicus HOM05D004498 ORTHO05D005300 4.1e-06 56.2 189 28.0
arahy.Tifrunner.gnm1.ann1.BI5KXL Arachis hypogaea HOM05D004498 ORTHO05D005300 5.3e-06 55.8 127 32.3
Dinv16848 Davidia involucrata HOM05D004498 ORTHO05D005300 5.3e-06 55.8 190 28.4
QL09p005249 Quercus lobata HOM05D004498 ORTHO05D005300 5.3e-06 55.8 192 29.7
CAN.G937.4 Capsicum annuum HOM05D004498 ORTHO05D005300 7.0e-06 55.5 183 29.0
CARHR205520 Cardamine hirsuta HOM05D004498 ORTHO05D005300 7.0e-06 55.5 155 29.7
Manes.14G037200 Manihot esculenta HOM05D004498 ORTHO05D005300 9.1e-06 55.1 189 29.1
Sabra01G0097300 Salix brachista HOM05D004498 ORTHO05D005300 9.1e-06 55.1 204 29.4


User provided reference genes

Program Settings