Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa025117 Carpinus fangiana HOM05D000032 ORTHO05D007444 7.7e-89 330.9 222 100.0
AagrBONN_evm.TU.Sc2ySwM_228.2969 Anthoceros agrestis HOM05D000032 ORTHO05D007444 2.7e-09 66.6 52 67.3
AL1G46050 Arabidopsis lyrata HOM05D000032 ORTHO05D007444 3.9e-08 62.8 52 63.5
ClCG07G002210 Citrullus lanatus HOM05D000032 ORTHO05D007444 3.9e-08 62.8 52 63.5
Sed0012143 Sechium edule HOM05D000032 ORTHO05D007444 3.9e-08 62.8 52 63.5
MSTRG.1786 Avicennia marina HOM05D000032 ORTHO05D007444 5.1e-08 62.4 52 65.4
PSO782G4822 Papaver somniferum HOM05D000032 ORTHO05D007444 8.7e-08 61.6 52 61.5
Hma1.2p1_0803F.1_g220720 Hydrangea macrophylla HOM05D000032 ORTHO05D007444 1.1e-07 61.2 52 63.5
Ciclev10000690m.g Citrus clementina HOM05D000032 ORTHO05D007444 1.5e-07 60.8 65 52.3
MELO3C026716.2 Cucumis melo HOM05D000032 ORTHO05D007444 1.5e-07 60.8 52 61.5
CsaV3_3G030450 Cucumis sativus L. HOM05D000032 ORTHO05D007444 1.5e-07 60.8 52 61.5
Cpa.g.sc16.14 Carica papaya HOM05D000032 ORTHO05D007444 1.9e-07 60.5 52 63.5
Cre12.g539100 Chlamydomonas reinhardtii HOM05D000032 ORTHO05D007444 1.9e-07 60.5 56 57.1
PGR031G3543 Punica granatum HOM05D000032 ORTHO05D007444 1.9e-07 60.5 52 63.5
TPR.G24223 Trifolium pratense HOM05D000032 ORTHO05D007444 1.9e-07 60.5 52 61.5
AUR62007381 Chenopodium quinoa HOM05D000032 ORTHO05D007444 2.5e-07 60.1 51 60.8
AUR62018607 Chenopodium quinoa HOM05D000032 ORTHO05D007444 2.5e-07 60.1 51 60.8
SMO141G0072 Selaginella moellendorffii HOM05D000032 ORTHO05D007444 2.5e-07 60.1 52 59.6
Hund11148 Selenicereus undatus HOM05D000032 ORTHO05D007444 2.5e-07 60.1 51 62.7
SEGI_15594 Sequoiadendron giganteum HOM05D000032 ORTHO05D007444 2.5e-07 60.1 51 64.7
AT1G31970 Arabidopsis thaliana HOM05D000032 ORTHO05D007444 3.3e-07 59.7 52 61.5
EL10Ac5g11976 Beta vulgaris HOM05D000032 ORTHO05D007444 3.3e-07 59.7 51 62.7
Carub.0001s3031 Capsella rubella HOM05D000032 ORTHO05D007444 3.3e-07 59.7 52 63.5
Ciclev10003217m.g Citrus clementina HOM05D000032 ORTHO05D007444 3.3e-07 59.7 52 61.5
Thhalv10007300m.g Eutrema salsugineum HOM05D000032 ORTHO05D007444 3.3e-07 59.7 52 61.5
Oeu017102.2 Olea europaea HOM05D000032 ORTHO05D007444 3.3e-07 59.7 51 58.8
Prupe.5G024900 Prunus persica HOM05D000032 ORTHO05D007444 4.3e-07 59.3 52 61.5
Mapoly0045s0142 Marchantia polymorpha HOM05D000032 ORTHO05D007444 5.6e-07 58.9 51 56.9
PSO063G7107 Papaver somniferum HOM05D000032 ORTHO05D007444 5.6e-07 58.9 52 59.6
Ca_25155_v3 Cicer arietinum L. HOM05D000032 ORTHO05D007444 7.4e-07 58.5 52 59.6
THA.LOC104798505 Tarenaya hassleriana HOM05D000032 ORTHO05D007444 7.4e-07 58.5 52 59.6
arahy.Tifrunner.gnm1.ann1.61HMI4 Arachis hypogaea HOM05D000032 ORTHO05D007444 9.6e-07 58.2 52 59.6
arahy.Tifrunner.gnm1.ann1.ZA5ISV Arachis hypogaea HOM05D000032 ORTHO05D007444 9.6e-07 58.2 52 59.6
HanXRQChr17g0537721 Helianthus annuus HOM05D000032 ORTHO05D007444 9.6e-07 58.2 52 61.5
Medtr5g027840 Medicago truncatula HOM05D000032 ORTHO05D007444 9.6e-07 58.2 52 59.6
Psat2g139400 Pisum sativum HOM05D000032 ORTHO05D007444 9.6e-07 58.2 52 59.6
GSVIVG01011527001 Vitis vinifera HOM05D000032 ORTHO05D007444 9.6e-07 58.2 52 61.5
Ah.12g055740 Amaranthus hybridus HOM05D000032 ORTHO05D007444 1.3e-06 57.8 51 58.8
COL.COLO4_16900 Corchorus olitorius HOM05D000032 ORTHO05D007444 1.3e-06 57.8 52 61.5
Eucgr.D02628 Eucalyptus grandis HOM05D000032 ORTHO05D007444 1.3e-06 57.8 52 61.5
Gohir.D03G177200 Gossypium hirsutum HOM05D000032 ORTHO05D007444 1.3e-06 57.8 52 61.5
Gorai.003G186400 Gossypium raimondii HOM05D000032 ORTHO05D007444 1.3e-06 57.8 52 61.5
Lsat_1_v5_gn_1_13001 Lactuca sativa HOM05D000032 ORTHO05D007444 1.3e-06 57.8 52 61.5
Pp3c21_4750 Physcomitrium patens HOM05D000032 ORTHO05D007444 1.3e-06 57.8 50 56.0
PRCOL_00004922 Prasinoderma coloniale HOM05D000032 ORTHO05D007444 1.3e-06 57.8 67 52.2
RcHm_v2.0_Chr7g0212761 Rosa chinensis HOM05D000032 ORTHO05D007444 1.3e-06 57.8 51 62.7
Aa31LG2G14020 Aethionema arabicum HOM05D000032 ORTHO05D002561 1.6e-06 57.4 52 59.6
Aa31LG2G14100 Aethionema arabicum HOM05D000032 ORTHO05D007444 1.6e-06 57.4 52 59.6
A08p09400 Brassica napus HOM05D000032 ORTHO05D007444 1.6e-06 57.4 51 60.8
Duzib068G1248 Durio zibethinus HOM05D000032 ORTHO05D007444 1.6e-06 57.4 52 61.5
ATR0829G024 Amborella trichopoda HOM05D000032 ORTHO05D007444 2.1e-06 57.0 51 52.9
MD00G1068700 Malus domestica HOM05D000032 ORTHO05D007444 2.1e-06 57.0 52 57.7
QL12p000251 Quercus lobata HOM05D000032 ORTHO05D007444 2.1e-06 57.0 52 59.6
CDE12G0512 Ceratophyllum demersum HOM05D000032 ORTHO05D007444 2.8e-06 56.6 52 57.7
FvH4_5g23490 Fragaria vesca HOM05D000032 ORTHO05D007444 2.8e-06 56.6 51 60.8
FAN04G1401 Fragaria x ananassa HOM05D000032 ORTHO05D007444 2.8e-06 56.6 51 60.8
FAN13G1431 Fragaria x ananassa HOM05D000032 ORTHO05D007444 2.8e-06 56.6 51 60.8
FAN18G0754 Fragaria x ananassa HOM05D000032 ORTHO05D007444 2.8e-06 56.6 51 60.8
FAN18G3167 Fragaria x ananassa HOM05D000032 ORTHO05D007444 2.8e-06 56.6 51 60.8
Manes.17G010800 Manihot esculenta HOM05D000032 ORTHO05D007444 2.8e-06 56.6 52 59.6
Atru.chr6.1559 Acer truncatum HOM05D000032 ORTHO05D007444 3.6e-06 56.2 52 59.6
Actinidia18142 Actinidia chinensis HOM05D000032 ORTHO05D007444 3.6e-06 56.2 52 59.6
Lalb_Chr16g0380911 Lupinus albus HOM05D000032 ORTHO05D007444 3.6e-06 56.2 52 55.8
BcaB07g32858 Brassica carinata HOM05D000032 ORTHO05D007444 4.8e-06 55.8 51 58.8
BcaC07g37639 Brassica carinata HOM05D000032 ORTHO05D007444 4.8e-06 55.8 51 58.8
A09p34220 Brassica napus HOM05D000032 ORTHO05D007444 4.8e-06 55.8 51 58.8
C05p31310 Brassica napus HOM05D000032 ORTHO05D007444 4.8e-06 55.8 51 58.8
BraA08t32938Z Brassica rapa HOM05D000032 ORTHO05D007444 4.8e-06 55.8 51 58.8
BraA09t38970Z Brassica rapa HOM05D000032 ORTHO05D007444 4.8e-06 55.8 51 58.8
Gohir.A03G000021 Gossypium hirsutum HOM05D000032 ORTHO05D007444 4.8e-06 55.8 52 59.6
VMungo1215G3152 Vigna mungo HOM05D000032 ORTHO05D007444 4.8e-06 55.8 52 57.7
Zm00001eb305590 Zea mays HOM05D000032 ORTHO05D007444 4.8e-06 55.8 51 56.9
Aa31LG2G13990 Aethionema arabicum HOM05D000032 ORTHO05D007444 6.2e-06 55.5 52 55.8
BcaC05g27222 Brassica carinata HOM05D000032 ORTHO05D007444 6.2e-06 55.5 51 58.8
BolC5t31854H Brassica oleracea HOM05D000032 ORTHO05D007444 6.2e-06 55.5 51 58.8
Haze_08121 Corylus avellana HOM05D000032 ORTHO05D007444 6.2e-06 55.5 52 55.8
ECA246G2233 Erigeron canadensis HOM05D000032 ORTHO05D007444 6.2e-06 55.5 51 60.8
Sc01g0006040 Simmondsia chinensis HOM05D000032 ORTHO05D007444 6.2e-06 55.5 51 56.9


User provided reference genes

Program Settings