Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa025081 Carpinus fangiana HOM05D004649 ORTHO05D005446 9.7e-281 969.5 505 100.0
SMO351G0195 Selaginella moellendorffii HOM05D004649 ORTHO05D005446 6.3e-22 109.8 419 24.1
Pp3c11_20060 Physcomitrium patens HOM05D004649 ORTHO05D005446 6.5e-19 99.8 450 21.6
HPP92_017768 Vanilla planifolia HOM05D004649 ORTHO05D005446 1.2e-17 95.5 330 26.1
Glyma.19G075700 Glycine max HOM05D004649 ORTHO05D005446 4.7e-17 93.6 414 23.9
arahy.Tifrunner.gnm1.ann1.2RTQ1W Arachis hypogaea HOM05D004649 ORTHO05D005446 6.1e-17 93.2 331 25.1
AUR62033709 Chenopodium quinoa HOM05D004649 ORTHO05D005446 1.4e-16 92.0 329 24.6
arahy.Tifrunner.gnm1.ann1.B3K3FC Arachis hypogaea HOM05D004649 ORTHO05D005446 1.8e-16 91.7 331 25.1
Glyma.05G075400 Glycine max HOM05D004649 ORTHO05D005446 1.8e-16 91.7 331 26.0
Lalb_Chr02g0157841 Lupinus albus HOM05D004649 ORTHO05D005446 5.2e-16 90.1 421 22.3
Lj1g0022023 Lotus japonicus HOM05D004649 ORTHO05D005446 6.8e-16 89.7 340 25.0
Ciclev10015345m.g Citrus clementina HOM05D004649 ORTHO05D005446 8.8e-16 89.4 416 23.3
Eucgr.I01664 Eucalyptus grandis HOM05D004649 ORTHO05D005446 8.8e-16 89.4 441 24.5
Manes.17G106100 Manihot esculenta HOM05D004649 ORTHO05D005446 1.2e-15 89.0 331 25.4
Potri.017G066300 Populus trichocarpa HOM05D004649 ORTHO05D005446 1.2e-15 89.0 329 24.0
QL02p072453 Quercus lobata HOM05D004649 ORTHO05D005446 1.2e-15 89.0 416 23.1
Zm00001eb261210 Zea mays HOM05D004649 ORTHO05D005446 1.5e-15 88.6 408 22.1
CBR_g75710 Chara braunii HOM05D004649 ORTHO05D005446 2.0e-15 88.2 323 23.8
AUR62036815 Chenopodium quinoa HOM05D004649 ORTHO05D005446 2.0e-15 88.2 329 24.3
Os08g0119000 Oryza sativa ssp. japonica HOM05D004649 ORTHO05D005446 2.0e-15 88.2 330 23.6
Rhsim10G0008900 Rhododendron simsii HOM05D004649 ORTHO05D005446 2.0e-15 88.2 407 22.9
VMungo1080G0439 Vigna mungo HOM05D004649 ORTHO05D005446 2.0e-15 88.2 329 24.3
HanXRQChr14g0450901 Helianthus annuus HOM05D004649 ORTHO05D005446 3.4e-15 87.4 330 24.5
Thecc.04G029900 Theobroma cacao HOM05D004649 ORTHO05D005446 5.7e-15 86.7 329 23.4
Ca_04417_v3 Cicer arietinum L. HOM05D004649 ORTHO05D005446 7.5e-15 86.3 331 25.1
Dinv33366 Davidia involucrata HOM05D004649 ORTHO05D005446 1.7e-14 85.1 329 23.7
Mapoly0005s0216 Marchantia polymorpha HOM05D004649 ORTHO05D005446 1.7e-14 85.1 411 21.2
CAN.G1965.13 Capsicum annuum HOM05D004649 ORTHO05D005446 2.2e-14 84.7 327 24.2
Cpa.g.sc130.9 Carica papaya HOM05D004649 ORTHO05D005446 2.2e-14 84.7 430 22.1
Cre16.g671100 Chlamydomonas reinhardtii HOM05D004649 ORTHO05D005446 2.2e-14 84.7 384 24.0
Phvul.004G055700 Phaseolus vulgaris HOM05D004649 ORTHO05D005446 2.2e-14 84.7 329 24.0
Atru.chr6.2512 Acer truncatum HOM05D004649 ORTHO05D005446 2.8e-14 84.3 329 24.0
Actinidia05924 Actinidia chinensis HOM05D004649 ORTHO05D005446 6.3e-14 83.2 415 23.4
Duzib264G0046 Durio zibethinus HOM05D004649 ORTHO05D005446 1.1e-13 82.4 329 24.3
Sc07g0004210 Simmondsia chinensis HOM05D004649 ORTHO05D005446 1.1e-13 82.4 305 23.9
CSS0030171 Camellia sinensis var. sinensis HOM05D004649 ORTHO05D005446 1.4e-13 82.0 414 21.7
CSS0047966 Camellia sinensis var. sinensis HOM05D004649 ORTHO05D005446 1.4e-13 82.0 414 21.7
Gohir.A05G340700 Gossypium hirsutum HOM05D004649 ORTHO05D005446 1.4e-13 82.0 329 23.7
Gohir.D04G079000 Gossypium hirsutum HOM05D004649 ORTHO05D005446 1.4e-13 82.0 329 23.7
Gorai.012G088900 Gossypium raimondii HOM05D004649 ORTHO05D005446 1.4e-13 82.0 329 23.7
Potri.001G334200 Populus trichocarpa HOM05D004649 ORTHO05D005446 1.4e-13 82.0 308 25.0
PGR142G2348 Punica granatum HOM05D004649 ORTHO05D005446 1.4e-13 82.0 329 24.0
TPR.G7524 Trifolium pratense HOM05D004649 ORTHO05D005446 1.8e-13 81.6 330 24.8
Lsat_1_v5_gn_2_93941 Lactuca sativa HOM05D004649 ORTHO05D005446 5.4e-13 80.1 330 24.2
Medtr6g023350 Medicago truncatula HOM05D004649 ORTHO05D005446 5.4e-13 80.1 331 24.5
TWI36G0899 Tripterygium wilfordii HOM05D004649 ORTHO05D005446 5.4e-13 80.1 329 23.4
Duzib147G0539 Durio zibethinus HOM05D004649 ORTHO05D005446 7.0e-13 79.7 329 23.7
RcHm_v2.0_Chr2g0174731 Rosa chinensis HOM05D004649 ORTHO05D005446 7.0e-13 79.7 421 22.3
AagrBONN_evm.TU.Sc2ySwM_368.1057 Anthoceros agrestis HOM05D004649 ORTHO05D005446 9.2e-13 79.3 464 20.3
ATR0124G048 Amborella trichopoda HOM05D004649 ORTHO05D005446 1.2e-12 79.0 370 21.9
EL10As11g23981 Beta vulgaris HOM05D004649 ORTHO05D005446 1.2e-12 79.0 283 26.9
GSVIVG01001824001 Vitis vinifera HOM05D004649 ORTHO05D005446 2.0e-12 78.2 414 21.5
MCO12G022 Micromonas commoda HOM05D004649 ORTHO05D005446 2.7e-12 77.8 355 23.7
HanXRQChr07g0198311 Helianthus annuus HOM05D004649 ORTHO05D005446 3.5e-12 77.4 341 24.6
CDE09G0552 Ceratophyllum demersum HOM05D004649 ORTHO05D005446 4.5e-12 77.0 326 24.2
THA.LOC104821114 Tarenaya hassleriana HOM05D004649 ORTHO05D005446 5.9e-12 76.6 329 23.4
ClCG11G006900 Citrullus lanatus HOM05D004649 ORTHO05D005446 7.8e-12 76.3 436 22.2
DCAR_015086 Daucus carota HOM05D004649 ORTHO05D005446 7.8e-12 76.3 344 24.7
MD17G1015500 Malus domestica HOM05D004649 ORTHO05D005446 1.0e-11 75.9 412 22.3
Zm00001eb173540 Zea mays HOM05D004649 ORTHO05D005446 1.0e-11 75.9 319 22.6
MD09G1015400 Malus domestica HOM05D004649 ORTHO05D005446 1.3e-11 75.5 329 23.7
Sabra16G0215300 Salix brachista HOM05D004649 ORTHO05D005446 2.3e-11 74.7 230 27.8
Psat1g084880 Pisum sativum HOM05D004649 ORTHO05D005446 6.6e-11 73.2 330 23.3
Haze_14832 Corylus avellana HOM05D004649 ORTHO05D005446 1.9e-10 71.6 341 23.5
Hund06757 Selenicereus undatus HOM05D004649 ORTHO05D005446 3.3e-10 70.9 328 24.1
Peaxi162Scf00420g00411 Petunia axillaris HOM05D004649 ORTHO05D005446 2.1e-09 68.2 336 23.8
PRCOL_00002547 Prasinoderma coloniale HOM05D004649 ORTHO05D005446 5.2e-08 63.5 336 22.3
unitig_52.g17652 Utricularia gibba HOM05D004649 ORTHO05D005446 1.2e-07 62.4 205 27.3


User provided reference genes

Program Settings