Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa025075 Carpinus fangiana HOM05D003115 ORTHO05D003595 0.0e+00 1939.1 1003 100.0
HanXRQChr17g0546471 Helianthus annuus HOM05D003115 ORTHO05D003595 2.0e-19 102.4 683 22.4
Lsat_1_v5_gn_6_59340 Lactuca sativa HOM05D003115 ORTHO05D003595 2.9e-18 98.6 695 22.2
Oeu002918.1 Olea europaea HOM05D003115 ORTHO05D003595 3.2e-17 95.1 686 21.0
Zm00001eb121880 Zea mays HOM05D003115 ORTHO05D003595 4.2e-17 94.7 699 22.2
Rhsim09G0059200 Rhododendron simsii HOM05D003115 ORTHO05D003595 7.1e-17 94.0 199 31.2
Pp3c3_18970 Physcomitrium patens HOM05D003115 ORTHO05D003595 1.2e-16 93.2 294 24.5
GSVIVG01021009001 Vitis vinifera HOM05D003115 ORTHO05D003595 4.6e-16 91.3 385 22.9
vmacro00444 Vaccinium macrocarpon HOM05D003115 ORTHO05D003595 1.8e-15 89.4 408 21.8
CSS0000754 Camellia sinensis var. sinensis HOM05D003115 ORTHO05D003595 3.0e-15 88.6 408 22.1
CSS0038204 Camellia sinensis var. sinensis HOM05D003115 ORTHO05D003595 3.0e-15 88.6 408 22.1
Cre10.g461000 Chlamydomonas reinhardtii HOM05D003115 ORTHO05D003595 3.9e-15 88.2 271 25.5
Dinv16255 Davidia involucrata HOM05D003115 ORTHO05D003595 6.7e-15 87.4 391 24.6
Prupe.3G074200 Prunus persica HOM05D003115 ORTHO05D003595 8.7e-15 87.0 413 23.2
Atru.chr10.1944 Acer truncatum HOM05D003115 ORTHO05D003595 1.1e-14 86.7 379 21.6
PGR119G1374 Punica granatum HOM05D003115 ORTHO05D003595 1.1e-14 86.7 388 21.4
Hund11640 Selenicereus undatus HOM05D003115 ORTHO05D003595 1.5e-14 86.3 371 25.3
Solyc09g092240.3 Solanum lycopersicum HOM05D003115 ORTHO05D003595 1.5e-14 86.3 381 24.9
Lj6g0020396 Lotus japonicus HOM05D003115 ORTHO05D003595 2.5e-14 85.5 356 22.8
MCO13G565 Micromonas commoda HOM05D003115 ORTHO05D003595 2.5e-14 85.5 201 31.8
SalBow3G3081 Salvia bowleyana HOM05D003115 ORTHO05D003595 2.5e-14 85.5 347 25.6
THA.LOC104808700 Tarenaya hassleriana HOM05D003115 ORTHO05D003595 2.5e-14 85.5 198 31.3
Medtr3g083970 Medicago truncatula HOM05D003115 ORTHO05D003595 3.3e-14 85.1 408 22.3
CiPaw.14G076100 Carya illinoinensis HOM05D003115 ORTHO05D003595 5.7e-14 84.3 192 30.7
Sopen09g035170 Solanum pennellii HOM05D003115 ORTHO05D003595 9.6e-14 83.6 388 24.2
SGA_v2.0_scaffold5G03024 Striga asiatica HOM05D003115 ORTHO05D003595 9.6e-14 83.6 367 23.2
Atru.chr4.1597 Acer truncatum HOM05D003115 ORTHO05D003595 1.3e-13 83.2 243 27.2
Ca_07922_v3 Cicer arietinum L. HOM05D003115 ORTHO05D003595 1.6e-13 82.8 396 23.2
Peaxi162Scf00047g00136 Petunia axillaris HOM05D003115 ORTHO05D003595 1.6e-13 82.8 192 30.2
Cfa009508 Carpinus fangiana HOM05D003115 ORTHO05D003595 6.3e-13 80.9 192 30.2
ECA233G4989 Erigeron canadensis HOM05D003115 ORTHO05D003595 8.2e-13 80.5 264 26.5
Prupe.3G077100 Prunus persica HOM05D003115 ORTHO05D003595 8.2e-13 80.5 422 22.7
RcHm_v2.0_Chr2g0137101 Rosa chinensis HOM05D003115 ORTHO05D003595 8.2e-13 80.5 380 22.4
FvH4_6g30710 Fragaria vesca HOM05D003115 ORTHO05D003595 1.1e-12 80.1 380 22.4
FAN02G0145 Fragaria x ananassa HOM05D003115 ORTHO05D003595 1.1e-12 80.1 380 23.2
FAN14G0460 Fragaria x ananassa HOM05D003115 ORTHO05D003595 1.4e-12 79.7 380 22.4
Glyma.18G016000 Glycine max HOM05D003115 ORTHO05D003595 1.4e-12 79.7 382 22.3
FAN05G1620 Fragaria x ananassa HOM05D003115 ORTHO05D003595 2.4e-12 79.0 380 22.9
ATR0665G483 Amborella trichopoda HOM05D003115 ORTHO05D003595 4.1e-12 78.2 265 27.9
MELO3C020422.2 Cucumis melo HOM05D003115 ORTHO05D003595 5.3e-12 77.8 414 23.7
SEGI_12321 Sequoiadendron giganteum HOM05D003115 ORTHO05D003595 9.0e-12 77.0 215 27.0
CsaV3_2G011790 Cucumis sativus L. HOM05D003115 ORTHO05D003595 1.2e-11 76.6 416 23.8
DCAR_007830 Daucus carota HOM05D003115 ORTHO05D003595 1.5e-11 76.3 335 21.5
Migut.B01882 Erythranthe guttata HOM05D003115 ORTHO05D003595 1.5e-11 76.3 192 30.7
Sc25g0005820 Simmondsia chinensis HOM05D003115 ORTHO05D003595 1.5e-11 76.3 396 22.0
MD17G1201300 Malus domestica HOM05D003115 ORTHO05D003595 2.0e-11 75.9 219 27.9
Lalb_Chr23g0269091 Lupinus albus HOM05D003115 ORTHO05D003595 3.4e-11 75.1 190 27.9
VMungo1383G2293 Vigna mungo HOM05D003115 ORTHO05D003595 3.4e-11 75.1 385 22.6
Gorai.011G152900 Gossypium raimondii HOM05D003115 ORTHO05D003595 7.6e-11 73.9 193 28.0
FAN09G2094 Fragaria x ananassa HOM05D003115 ORTHO05D003595 1.0e-10 73.6 380 21.6
Phvul.001G253000 Phaseolus vulgaris HOM05D003115 ORTHO05D003595 1.0e-10 73.6 385 21.0
Mapoly0054s0075 Marchantia polymorpha HOM05D003115 ORTHO05D003595 1.3e-10 73.2 269 24.2
QL04p081909 Quercus lobata HOM05D003115 ORTHO05D003595 1.3e-10 73.2 184 31.5
AagrBONN_evm.TU.Sc2ySwM_228.2833 Anthoceros agrestis HOM05D003115 ORTHO05D003595 2.2e-10 72.4 311 25.4
arahy.Tifrunner.gnm1.ann1.01WSAY Arachis hypogaea HOM05D003115 ORTHO05D003595 2.2e-10 72.4 219 26.0
Ah.04g149340 Amaranthus hybridus HOM05D003115 ORTHO05D003595 3.8e-10 71.6 240 24.2
Cc00_g24210 Coffea canephora HOM05D003115 ORTHO05D003595 3.8e-10 71.6 433 23.3
Gohir.A10G128200 Gossypium hirsutum HOM05D003115 ORTHO05D003595 8.4e-10 70.5 383 22.5
Thhalv10009353m.g Eutrema salsugineum HOM05D003115 ORTHO05D003595 1.2e-08 66.6 162 27.8
CDE07G0754 Ceratophyllum demersum HOM05D003115 ORTHO05D003595 2.1e-08 65.9 254 22.4
arahy.Tifrunner.gnm1.ann1.QS081X Arachis hypogaea HOM05D003115 ORTHO05D003595 3.5e-08 65.1 170 26.5
EL10Ac3g07463 Beta vulgaris HOM05D003115 ORTHO05D003595 6.1e-08 64.3 245 22.9
Eucgr.H00030 Eucalyptus grandis HOM05D003115 ORTHO05D003595 7.9e-08 63.9 197 30.5
Haze_07641 Corylus avellana HOM05D003115 ORTHO05D003595 1.3e-07 63.2 105 36.2
Manes.15G056200 Manihot esculenta HOM05D003115 ORTHO05D003595 3.0e-07 62.0 150 27.3
AUR62018566 Chenopodium quinoa HOM05D003115 ORTHO05D003595 3.9e-07 61.6 241 23.2
TWI56G0473 Tripterygium wilfordii HOM05D003115 ORTHO05D003595 6.7e-07 60.8 232 23.3
Psat4g000240 Pisum sativum HOM05D003766 ORTHO05D004607 8.7e-07 60.5 194 28.4
Hma1.2p1_0039F.1_g024560 Hydrangea macrophylla HOM05D003115 ORTHO05D003595 1.5e-06 59.7 249 21.7
Ciclev10004117m.g Citrus clementina HOM05D003115 ORTHO05D003595 2.5e-06 58.9 156 25.6
AUR62020852 Chenopodium quinoa HOM05D003115 ORTHO05D003595 3.3e-06 58.5 214 23.4
Nitab4.5_0012127g0010 Nicotiana tabacum HOM05D003115 ORTHO05D003595 7.4e-06 57.4 311 22.2
Nitab4.5_0000697g0090 Nicotiana tabacum HOM05D003115 ORTHO05D003595 9.7e-06 57.0 311 22.2
SEGI_06154 Sequoiadendron giganteum HOM05D003115 ORTHO05D003595 9.7e-06 57.0 306 23.9


User provided reference genes

Program Settings