Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa025044 Carpinus fangiana HOM05D002878 ORTHO05D124598 3.4e-169 598.2 296 100.0
Cfa027020 Carpinus fangiana HOM05D002878 ORTHO05D028643 1.2e-12 78.2 167 24.6
Migut.B01363 Erythranthe guttata HOM05D002878 ORTHO05D003649 8.6e-11 72.0 319 25.4
Potri.001G229100 Populus trichocarpa HOM05D002878 ORTHO05D003649 3.3e-10 70.1 323 25.1
QL04p003128 Quercus lobata HOM05D002878 ORTHO05D003649 5.6e-10 69.3 322 24.2
Dinv43928 Davidia involucrata HOM05D002878 ORTHO05D003649 1.2e-09 68.2 320 25.3
QL04p000093 Quercus lobata HOM05D002878 ORTHO05D003649 1.2e-09 68.2 322 24.2
Migut.B01365 Erythranthe guttata HOM05D002878 ORTHO05D003649 1.6e-09 67.8 321 23.7
ECA236G1248 Erigeron canadensis HOM05D002878 ORTHO05D003649 1.4e-08 64.7 328 24.1
QL07p005912 Quercus lobata HOM05D002878 ORTHO05D003649 1.8e-08 64.3 322 23.9
Lj3g0027459 Lotus japonicus HOM05D002878 ORTHO05D003649 4.0e-08 63.2 321 24.9
Medtr4g022850 Medicago truncatula HOM05D002878 ORTHO05D003649 4.0e-08 63.2 321 24.6
TAR633G2681 Trochodendron aralioides HOM05D002878 ORTHO05D003649 8.9e-08 62.0 174 27.0
Ah.14g089040 Amaranthus hybridus HOM05D000686 ORTHO05D000512 1.2e-07 61.6 315 25.1
Lalb_Chr01g0008141 Lupinus albus HOM05D002878 ORTHO05D003649 1.5e-07 61.2 323 24.1
MD02G1318300 Malus domestica HOM05D002878 ORTHO05D003649 1.5e-07 61.2 178 26.4
Sabra16G0136700 Salix brachista HOM05D002878 ORTHO05D003649 2.0e-07 60.8 322 25.2
GSVIVG01001372001 Vitis vinifera HOM05D002878 ORTHO05D003649 2.0e-07 60.8 177 27.1
Lsat_1_v5_gn_9_111181 Lactuca sativa HOM05D002878 ORTHO05D003649 2.6e-07 60.5 182 25.3
Cfa022315 Carpinus fangiana HOM05D000686 ORTHO05D011490 7.5e-07 58.9 173 26.6
HanXRQChr04g0117341 Helianthus annuus HOM05D002878 ORTHO05D003649 9.8e-07 58.5 181 23.8
VMungo1127G0209 Vigna mungo HOM05D002878 ORTHO05D003649 9.8e-07 58.5 320 22.2
Cfa005271 Carpinus fangiana HOM05D000686 ORTHO05D000512 1.3e-06 58.2 316 26.6
Sabra05G0112100 Salix brachista HOM05D002878 ORTHO05D003649 1.3e-06 58.2 174 24.7
Ah.01g023140 Amaranthus hybridus HOM05D000686 ORTHO05D000512 1.7e-06 57.8 300 26.3
Potri.005G138400 Populus trichocarpa HOM05D002878 ORTHO05D003649 1.7e-06 57.8 174 24.7
Carub.0007s0043 Capsella rubella HOM05D000686 ORTHO05D000512 2.2e-06 57.4 320 23.8
Sed0001217 Sechium edule HOM05D000686 ORTHO05D000512 2.2e-06 57.4 317 24.0
AUR62010023 Chenopodium quinoa HOM05D000686 ORTHO05D000512 2.9e-06 57.0 318 24.5
Glyma.09G000600 Glycine max HOM05D002878 ORTHO05D003649 2.9e-06 57.0 173 27.2
Phvul.011G214600 Phaseolus vulgaris HOM05D002878 ORTHO05D003649 4.9e-06 56.2 319 22.3
Potri.007G044300 Populus trichocarpa HOM05D002878 ORTHO05D003649 4.9e-06 56.2 174 25.3
GSVIVG01008760001 Vitis vinifera HOM05D000686 ORTHO05D000512 4.9e-06 56.2 320 25.0
DCAR_025735 Daucus carota HOM05D002878 ORTHO05D003649 6.4e-06 55.8 326 23.3
Aqoxy1G02089 Aquilegia oxysepala HOM05D000686 ORTHO05D000512 8.3e-06 55.5 318 24.5


User provided reference genes

Program Settings