Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa025031 Carpinus fangiana HOM05D000277 ORTHO05D121396 4.6e-269 930.6 464 100.0
CiPaw.01G015600 Carya illinoinensis HOM05D000277 ORTHO05D000214 1.2e-11 75.5 327 26.6
CiPaw.01G015900 Carya illinoinensis HOM05D000277 ORTHO05D000214 3.5e-11 73.9 327 26.3
A03p03490 Brassica napus HOM05D000277 ORTHO05D000214 6.7e-10 69.7 325 22.8
BraA03t09699Z Brassica rapa HOM05D000277 ORTHO05D000214 1.1e-09 68.9 325 22.8
CSS0042989 Camellia sinensis var. sinensis HOM05D000277 ORTHO05D000214 1.5e-09 68.6 314 25.5
Thhalv10013445m.g Eutrema salsugineum HOM05D000277 ORTHO05D000214 1.9e-09 68.2 322 24.5
C03p03910 Brassica napus HOM05D000277 ORTHO05D000214 3.3e-09 67.4 322 22.7
BolC3t12929H Brassica oleracea HOM05D000277 ORTHO05D000214 3.3e-09 67.4 322 22.7
BcaB01g05648 Brassica carinata HOM05D000277 ORTHO05D000214 5.6e-09 66.6 322 22.7
AUR62016866 Chenopodium quinoa HOM05D000277 ORTHO05D000214 5.6e-09 66.6 325 24.3
AT5G07870 Arabidopsis thaliana HOM05D000277 ORTHO05D000214 8.2e-08 62.8 317 25.6
BcaNung04723 Brassica carinata HOM05D000277 ORTHO05D000214 1.1e-07 62.4 327 24.2
PSO832G3952 Papaver somniferum HOM05D000277 ORTHO05D000214 1.1e-07 62.4 316 22.8
EL10Ac5g12050 Beta vulgaris HOM05D000277 ORTHO05D000214 1.4e-07 62.0 336 23.8
BcaNung04720 Brassica carinata HOM05D000277 ORTHO05D000214 3.1e-07 60.8 315 25.1
Medtr4g094832 Medicago truncatula HOM05D000277 ORTHO05D000214 4.0e-07 60.5 319 23.5
Thecc.09G028000 Theobroma cacao HOM05D000079 ORTHO05D000211 4.0e-07 60.5 313 23.0
Medtr4g094835 Medicago truncatula HOM05D000277 ORTHO05D000214 5.3e-07 60.1 217 27.6
EL10Ac9g22231 Beta vulgaris HOM05D000277 ORTHO05D000214 6.9e-07 59.7 323 22.0
Peaxi162Scf00504g00011 Petunia axillaris HOM05D000277 ORTHO05D000214 1.2e-06 58.9 225 29.3
TPR.G24158 Trifolium pratense HOM05D000277 ORTHO05D000214 1.2e-06 58.9 327 22.6
BraA02t04933Z Brassica rapa HOM05D000277 ORTHO05D000214 1.5e-06 58.5 329 24.3
Rhsim07G0226400 Rhododendron simsii HOM05D000277 ORTHO05D000214 1.5e-06 58.5 313 23.6
Psat0s1717g0080 Pisum sativum HOM05D000277 ORTHO05D000214 2.0e-06 58.2 221 27.6
QL02p030529 Quercus lobata HOM05D000277 ORTHO05D000214 2.0e-06 58.2 232 27.6
QL04p095004 Quercus lobata HOM05D000277 ORTHO05D000214 2.0e-06 58.2 232 27.6
Aa31LG3G18620 Aethionema arabicum HOM05D000277 ORTHO05D000214 2.6e-06 57.8 317 21.8
PSO541G6029 Papaver somniferum HOM05D000277 ORTHO05D000214 2.6e-06 57.8 317 21.5
QL02p004304 Quercus lobata HOM05D000277 ORTHO05D000214 2.6e-06 57.8 335 24.2
EL10Ac4g08859 Beta vulgaris HOM05D000277 ORTHO05D000214 3.4e-06 57.4 328 25.6
AUR62018685 Chenopodium quinoa HOM05D000277 ORTHO05D000214 3.4e-06 57.4 339 23.0
PSO675G5699 Papaver somniferum HOM05D000277 ORTHO05D000214 3.4e-06 57.4 313 20.8
Nitab4.5_0010126g0010 Nicotiana tabacum HOM05D000277 ORTHO05D000214 4.5e-06 57.0 323 22.9
SMO358G0502 Selaginella moellendorffii HOM05D000079 ORTHO05D000211 4.5e-06 57.0 259 22.8
AL6G18200 Arabidopsis lyrata HOM05D000277 ORTHO05D000214 5.8e-06 56.6 313 24.9
Medtr3g102020 Medicago truncatula HOM05D000277 ORTHO05D000214 5.8e-06 56.6 338 23.7
BcaNung04719 Brassica carinata HOM05D000277 ORTHO05D000214 7.6e-06 56.2 329 24.0
C02p03290 Brassica napus HOM05D000277 ORTHO05D000214 7.6e-06 56.2 329 24.0
BolC2t06293H Brassica oleracea HOM05D000277 ORTHO05D000214 7.6e-06 56.2 329 24.0
FvH4_1g16301 Fragaria vesca HOM05D000277 ORTHO05D000214 7.6e-06 56.2 215 24.7
PSO017G1518 Papaver somniferum HOM05D000277 ORTHO05D000214 1.0e-05 55.8 220 29.5
Prupe.7G130100 Prunus persica HOM05D000277 ORTHO05D000214 1.0e-05 55.8 342 23.4
RcHm_v2.0_Chr6g0308301 Rosa chinensis HOM05D000277 ORTHO05D000214 1.0e-05 55.8 330 24.8


User provided reference genes

Program Settings