Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa024898 Carpinus fangiana HOM05D003482 ORTHO05D043602 2.0e-302 1041.6 501 100.0
Lsat_1_v5_gn_5_58361 Lactuca sativa HOM05D003482 ORTHO05D004194 2.7e-09 67.8 184 24.5
CBR_g40631 Chara braunii HOM05D002830 ORTHO05D002258 3.6e-09 67.4 179 27.9
HPP92_015798 Vanilla planifolia HOM05D003482 ORTHO05D004194 1.0e-08 65.9 230 23.0
HPP92_015810 Vanilla planifolia HOM05D003482 ORTHO05D004194 1.0e-08 65.9 230 23.0
CBR_g4189 Chara braunii HOM05D003482 ORTHO05D004194 4.0e-08 63.9 197 23.9
Lsat_1_v5_gn_5_58881 Lactuca sativa HOM05D003482 ORTHO05D004194 4.0e-08 63.9 209 25.4
Pp3s42_110 Physcomitrium patens HOM05D055763 ORTHO05D315969 4.0e-08 63.9 173 26.0
Lsat_1_v5_gn_5_60380 Lactuca sativa HOM05D003482 ORTHO05D004194 5.2e-08 63.5 207 24.2
Lsat_1_v5_gn_5_59000 Lactuca sativa HOM05D003482 ORTHO05D004194 6.7e-08 63.2 201 24.9
Manes.16G137200 Manihot esculenta HOM05D003482 ORTHO05D004194 6.7e-08 63.2 191 25.1
FAN27G0167 Fragaria x ananassa HOM05D003482 ORTHO05D004194 1.1e-07 62.4 215 24.7
PGR044G0156 Punica granatum HOM05D003482 ORTHO05D004194 1.5e-07 62.0 207 23.7
ECA240G2590 Erigeron canadensis HOM05D003482 ORTHO05D004194 2.0e-07 61.6 261 20.7
Pp3c16_18060 Physcomitrium patens HOM05D003482 ORTHO05D004194 2.0e-07 61.6 214 22.4
Potri.006G276600 Populus trichocarpa HOM05D003482 ORTHO05D004194 2.0e-07 61.6 211 25.1
ECA240G0756 Erigeron canadensis HOM05D003482 ORTHO05D004194 3.3e-07 60.8 200 25.5
FvH4_2g36372 Fragaria vesca HOM05D003482 ORTHO05D004194 3.3e-07 60.8 215 24.2
HanXRQChr13g0411981 Helianthus annuus HOM05D003482 ORTHO05D004194 3.3e-07 60.8 218 24.8
Lsat_1_v5_gn_5_60400 Lactuca sativa HOM05D003482 ORTHO05D004194 3.3e-07 60.8 239 22.2
Lsat_1_v5_gn_5_58921 Lactuca sativa HOM05D003482 ORTHO05D004194 4.4e-07 60.5 201 24.9
CDE05G0655 Ceratophyllum demersum HOM05D003482 ORTHO05D004194 5.7e-07 60.1 197 26.4
Eucgr.C03989 Eucalyptus grandis HOM05D003482 ORTHO05D004194 5.7e-07 60.1 205 24.9
Gohir.A05G066000 Gossypium hirsutum HOM05D003482 ORTHO05D004194 5.7e-07 60.1 205 25.9
Sed0005804 Sechium edule HOM05D003482 ORTHO05D004194 5.7e-07 60.1 250 24.4
Zm00001eb272880 Zea mays HOM05D003482 ORTHO05D004194 5.7e-07 60.1 191 23.0
Cpa.g.sc328.6 Carica papaya HOM05D003482 ORTHO05D004194 7.4e-07 59.7 211 22.7
ECA233G2479 Erigeron canadensis HOM05D003482 ORTHO05D004194 7.4e-07 59.7 198 24.2
Manes.03G001800 Manihot esculenta HOM05D003482 ORTHO05D004194 7.4e-07 59.7 219 23.3
Ciclev10007354m.g Citrus clementina HOM05D003482 ORTHO05D004194 9.7e-07 59.3 210 24.3
Gohir.D05G068400 Gossypium hirsutum HOM05D003482 ORTHO05D004194 9.7e-07 59.3 191 25.7
Gorai.009G069300 Gossypium raimondii HOM05D003482 ORTHO05D004194 9.7e-07 59.3 191 25.7
ATR0626G323 Amborella trichopoda HOM05D003482 ORTHO05D004194 1.3e-06 58.9 236 25.0
A06p35580 Brassica napus HOM05D003482 ORTHO05D004194 1.3e-06 58.9 219 23.7
Carub.0006s2266 Capsella rubella HOM05D003482 ORTHO05D004194 1.3e-06 58.9 217 23.0
MELO3C003597.2 Cucumis melo HOM05D003482 ORTHO05D004194 1.3e-06 58.9 199 25.6
Actinidia14155 Actinidia chinensis HOM05D003482 ORTHO05D004194 1.7e-06 58.5 194 21.6
C07p42960 Brassica napus HOM05D003482 ORTHO05D004194 1.7e-06 58.5 219 24.2
BolC7t44825H Brassica oleracea HOM05D003482 ORTHO05D004194 1.7e-06 58.5 219 24.2
ECA240G4147 Erigeron canadensis HOM05D003482 ORTHO05D004194 1.7e-06 58.5 202 24.3
HanXRQChr03g0082881 Helianthus annuus HOM05D003482 ORTHO05D004194 1.7e-06 58.5 251 22.7
Sc14g0002010 Simmondsia chinensis HOM05D003482 ORTHO05D004194 1.7e-06 58.5 198 22.7
BcaC03g17943 Brassica carinata HOM05D003482 ORTHO05D004194 2.2e-06 58.2 217 23.5
C02p60040 Brassica napus HOM05D003482 ORTHO05D004194 2.2e-06 58.2 217 23.5
HanXRQChr13g0411821 Helianthus annuus HOM05D003482 ORTHO05D004194 2.2e-06 58.2 199 24.1
CANSAT25G1343 Cannabis sativa HOM05D003482 ORTHO05D004194 2.8e-06 57.8 217 24.9
Ca_12826_v3 Cicer arietinum L. HOM05D003482 ORTHO05D004194 2.8e-06 57.8 201 24.4
Lsat_1_v5_gn_5_60420 Lactuca sativa HOM05D003482 ORTHO05D004194 2.8e-06 57.8 230 24.3
Lsat_1_v5_gn_5_60480 Lactuca sativa HOM05D003482 ORTHO05D004194 2.8e-06 57.8 193 24.9
Psat6g006000 Pisum sativum HOM05D003482 ORTHO05D004194 2.8e-06 57.8 217 23.0
BolC2t12059H Brassica oleracea HOM05D003482 ORTHO05D004194 3.7e-06 57.4 217 23.5
CBR_g24186 Chara braunii HOM05D003482 ORTHO05D043602 3.7e-06 57.4 171 27.5
CsaV3_3G047320 Cucumis sativus L. HOM05D003482 ORTHO05D004194 3.7e-06 57.4 213 24.9
HanXRQChr13g0412011 Helianthus annuus HOM05D003482 ORTHO05D004194 3.7e-06 57.4 216 24.5
BcaB07g29924 Brassica carinata HOM05D003482 ORTHO05D004194 6.3e-06 56.6 219 23.7
Lj1g0006594 Lotus japonicus HOM05D003482 ORTHO05D004194 6.3e-06 56.6 209 23.9
Sabra18G0008800 Salix brachista HOM05D003482 ORTHO05D004194 6.3e-06 56.6 207 24.6


User provided reference genes

Program Settings