Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa024896 Carpinus fangiana HOM05D016748 ORTHO05D018922 0.0e+00 1416.7 783 100.0
Cfa026280 Carpinus fangiana HOM05D016748 ORTHO05D018922 1.0e-34 152.9 469 28.8
Cre09.g394917 Chlamydomonas reinhardtii HOM05D016748 ORTHO05D018922 1.7e-29 135.6 228 36.0
Cre02.g087450 Chlamydomonas reinhardtii HOM05D016748 ORTHO05D018922 4.1e-28 131.0 228 36.0
Cre13.g590700 Chlamydomonas reinhardtii HOM05D016748 ORTHO05D018922 4.5e-27 127.5 230 33.0
Cre13.g589250 Chlamydomonas reinhardtii HOM05D016748 ORTHO05D018922 1.1e-25 122.9 221 31.2
Cre08.g374950 Chlamydomonas reinhardtii HOM05D016748 ORTHO05D018922 2.1e-16 92.0 168 34.5
Cfa022811 Carpinus fangiana HOM05D016748 ORTHO05D018922 1.1e-09 69.7 359 22.8
Cc11_g12430 Coffea canephora HOM05D002362 ORTHO05D002465 2.1e-08 65.5 226 25.2
Pp3c14_16900 Physcomitrium patens HOM05D002362 ORTHO05D002465 3.6e-08 64.7 227 26.0
HanXRQChr08g0219931 Helianthus annuus HOM05D002362 ORTHO05D002465 2.3e-07 62.0 222 23.0
Os07g0694800 Oryza sativa ssp. japonica HOM05D002362 ORTHO05D002465 3.1e-07 61.6 230 24.8
Pp3c17_21470 Physcomitrium patens HOM05D002362 ORTHO05D002465 3.1e-07 61.6 227 25.6
MD01G1113300 Malus domestica HOM05D002362 ORTHO05D002465 5.2e-07 60.8 224 23.7
Medtr1g049180 Medicago truncatula HOM05D002362 ORTHO05D002465 5.2e-07 60.8 229 23.1
SMO236G0007 Selaginella moellendorffii HOM05D002362 ORTHO05D002465 5.2e-07 60.8 221 23.5
Ca_21497_v3 Cicer arietinum L. HOM05D002362 ORTHO05D002465 6.8e-07 60.5 229 23.6
Lj6g0006383 Lotus japonicus HOM05D002362 ORTHO05D002465 8.9e-07 60.1 229 22.7
Zm00001eb331610 Zea mays HOM05D002362 ORTHO05D002465 8.9e-07 60.1 230 23.9
Prupe.2G220000 Prunus persica HOM05D002362 ORTHO05D002465 1.5e-06 59.3 224 23.7
Glyma.10G116500 Glycine max HOM05D002362 ORTHO05D002465 2.0e-06 58.9 224 24.1
Lalb_Chr19g0129061 Lupinus albus HOM05D002362 ORTHO05D002465 2.0e-06 58.9 224 24.1
Phvul.007G240000 Phaseolus vulgaris HOM05D002362 ORTHO05D002465 2.0e-06 58.9 225 24.4
QL08p057096 Quercus lobata HOM05D002362 ORTHO05D002465 2.0e-06 58.9 227 23.8
Aa31LG1G12960 Aethionema arabicum HOM05D002362 ORTHO05D002465 2.6e-06 58.5 224 22.8
arahy.Tifrunner.gnm1.ann1.BLC183 Arachis hypogaea HOM05D002362 ORTHO05D002465 2.6e-06 58.5 224 24.1
MD07G1180700 Malus domestica HOM05D002362 ORTHO05D002465 2.6e-06 58.5 223 22.9
AagrBONN_evm.TU.Sc2ySwM_228.853 Anthoceros agrestis HOM05D002362 ORTHO05D002465 3.4e-06 58.2 225 25.3
CiPaw.01G277400 Carya illinoinensis HOM05D002362 ORTHO05D002465 3.4e-06 58.2 223 23.8
Sed0011247 Sechium edule HOM05D002362 ORTHO05D002465 3.4e-06 58.2 226 23.5
VMungo0720G1291 Vigna mungo HOM05D002362 ORTHO05D002465 3.4e-06 58.2 224 24.1
ClCG02G013830 Citrullus lanatus HOM05D002362 ORTHO05D002465 4.4e-06 57.8 224 23.2
CsaV3_5G006340 Cucumis sativus L. HOM05D002362 ORTHO05D002465 4.4e-06 57.8 224 23.2
HanXRQChr14g0460911 Helianthus annuus HOM05D002362 ORTHO05D002465 4.4e-06 57.8 223 24.2
FAN06G1257 Fragaria x ananassa HOM05D002362 ORTHO05D002465 5.8e-06 57.4 225 23.1
Lj1A925T68 Lonicera japonica HOM05D002362 ORTHO05D002465 5.8e-06 57.4 223 23.3
Lj3C1032G18 Lonicera japonica HOM05D002362 ORTHO05D002465 7.5e-06 57.0 231 23.8
Sc09g0006810 Simmondsia chinensis HOM05D002362 ORTHO05D002465 7.5e-06 57.0 223 22.4
SGA_v2.0_scaffold122G33247 Striga asiatica HOM05D002362 ORTHO05D002465 7.5e-06 57.0 229 22.7
CSS0041857 Camellia sinensis var. sinensis HOM05D002362 ORTHO05D002465 9.9e-06 56.6 223 23.8
MELO3C011723.2 Cucumis melo HOM05D002362 ORTHO05D002465 9.9e-06 56.6 224 22.8
Lj8C94G18 Lonicera japonica HOM05D002362 ORTHO05D002465 9.9e-06 56.6 223 22.9
GSVIVG01016351001 Vitis vinifera HOM05D002362 ORTHO05D002465 9.9e-06 56.6 223 23.8


User provided reference genes

Program Settings