Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa024758 Carpinus fangiana HOM05D002567 ORTHO05D007435 3.2e-254 881.3 472 100.0
SMO145G0291 Selaginella moellendorffii HOM05D002567 ORTHO05D007435 3.3e-33 147.1 308 34.4
AL4G47410 Arabidopsis lyrata HOM05D002567 ORTHO05D007435 3.7e-32 143.7 320 31.6
AT2G47830 Arabidopsis thaliana HOM05D002567 ORTHO05D007435 4.8e-32 143.3 320 31.2
Thhalv10001431m.g Eutrema salsugineum HOM05D002567 ORTHO05D007435 1.8e-31 141.4 322 31.4
THA.LOC104817512 Tarenaya hassleriana HOM05D002567 ORTHO05D007435 1.8e-31 141.4 324 31.2
Cc01_g20520 Coffea canephora HOM05D002567 ORTHO05D007435 4.1e-31 140.2 330 30.6
FvH4_c6g00080 Fragaria vesca HOM05D002567 ORTHO05D007435 4.1e-31 140.2 352 30.4
Sp4g29760 Schrenkiella parvula HOM05D002567 ORTHO05D007435 1.2e-30 138.7 318 31.1
CARHR143220 Cardamine hirsuta HOM05D002567 ORTHO05D007435 2.0e-30 137.9 318 31.4
DCAR_012404 Daucus carota HOM05D002567 ORTHO05D007435 2.0e-30 137.9 330 30.9
FvH4_c6g00110 Fragaria vesca HOM05D002567 ORTHO05D007435 2.0e-30 137.9 352 31.0
Lsat_1_v5_gn_5_189341 Lactuca sativa HOM05D002567 ORTHO05D007435 4.5e-30 136.7 323 30.3
Aqoxy5G00699 Aquilegia oxysepala HOM05D002567 ORTHO05D007435 5.9e-30 136.3 343 30.6
BcaB01g03155 Brassica carinata HOM05D002567 ORTHO05D007435 7.7e-30 136.0 320 30.9
Mapoly0007s0103 Marchantia polymorpha HOM05D002567 ORTHO05D007435 1.0e-29 135.6 242 35.5
Aa31LG1G29180 Aethionema arabicum HOM05D002567 ORTHO05D007435 1.3e-29 135.2 318 30.8
A03p26080 Brassica napus HOM05D002567 ORTHO05D007435 1.3e-29 135.2 320 30.9
BraA03t11823Z Brassica rapa HOM05D002567 ORTHO05D007435 1.3e-29 135.2 320 30.9
Os03g0346800 Oryza sativa ssp. japonica HOM05D002567 ORTHO05D007435 1.7e-29 134.8 347 30.8
HanXRQChr01g0001661 Helianthus annuus HOM05D002567 ORTHO05D007435 2.2e-29 134.4 351 29.3
Phvul.007G165166 Phaseolus vulgaris HOM05D002567 ORTHO05D007435 2.2e-29 134.4 320 30.6
BcaC01g05016 Brassica carinata HOM05D002567 ORTHO05D007435 2.9e-29 134.0 320 30.3
Nitab4.5_0001697g0140 Nicotiana tabacum HOM05D002567 ORTHO05D006538 2.9e-29 134.0 235 36.2
C03p31100 Brassica napus HOM05D002567 ORTHO05D007435 3.8e-29 133.7 320 30.6
BolC3t15458H Brassica oleracea HOM05D002567 ORTHO05D007435 5.0e-29 133.3 320 30.6
Glyma.10G020300 Glycine max HOM05D002567 ORTHO05D007435 5.0e-29 133.3 324 30.6
Medtr1g088870 Medicago truncatula HOM05D002567 ORTHO05D007435 5.0e-29 133.3 322 30.1
Nn5g30061 Nelumbo nucifera HOM05D002567 ORTHO05D007435 5.0e-29 133.3 333 30.0
ECA248G3501 Erigeron canadensis HOM05D002567 ORTHO05D007435 8.5e-29 132.5 318 30.5
Lalb_Chr06g0163361 Lupinus albus HOM05D002567 ORTHO05D007435 8.5e-29 132.5 324 29.9
Glyma.02G153800 Glycine max HOM05D002567 ORTHO05D007435 1.1e-28 132.1 324 31.2
Psat6g167000 Pisum sativum HOM05D002567 ORTHO05D007435 1.9e-28 131.3 291 32.0
TWI14G0999 Tripterygium wilfordii HOM05D002567 ORTHO05D007435 1.9e-28 131.3 324 30.6
Pp3c10_1060 Physcomitrium patens HOM05D002567 ORTHO05D007435 2.5e-28 131.0 340 29.1
Lj5g0023248 Lotus japonicus HOM05D002567 ORTHO05D007435 3.2e-28 130.6 320 30.0
VMungo0720G1827 Vigna mungo HOM05D002567 ORTHO05D007435 3.2e-28 130.6 324 29.6
Lj2C1189T5 Lonicera japonica HOM05D002567 ORTHO05D007435 4.2e-28 130.2 232 34.5
CAN.G1562.6 Capsicum annuum HOM05D002567 ORTHO05D007435 5.5e-28 129.8 217 35.9
COL.COLO4_07998 Corchorus olitorius HOM05D002567 ORTHO05D006538 5.5e-28 129.8 327 30.0
Oeu046707.1 Olea europaea HOM05D002567 ORTHO05D007435 5.5e-28 129.8 331 30.2
Cpa.g.sc9.190 Carica papaya HOM05D002567 ORTHO05D007435 7.2e-28 129.4 325 30.8
MD03G1284200 Malus domestica HOM05D002567 ORTHO05D007435 7.2e-28 129.4 320 28.8
Thecc.01G294000 Theobroma cacao HOM05D002567 ORTHO05D007435 7.2e-28 129.4 325 30.2
GSVIVG01010968001 Vitis vinifera HOM05D002567 ORTHO05D007435 7.2e-28 129.4 327 29.4
ClCG09G006190 Citrullus lanatus HOM05D002567 ORTHO05D007435 9.4e-28 129.0 327 30.6
Actinidia24843 Actinidia chinensis HOM05D002567 ORTHO05D007435 1.2e-27 128.6 314 30.6
FAN24G0883 Fragaria x ananassa HOM05D002567 ORTHO05D007435 1.2e-27 128.6 370 29.5
TPR.G33972 Trifolium pratense HOM05D002567 ORTHO05D007435 1.2e-27 128.6 336 29.2
Migut.D00184 Erythranthe guttata HOM05D002567 ORTHO05D007435 1.6e-27 128.3 320 30.3
FAN15G3695 Fragaria x ananassa HOM05D002567 ORTHO05D007435 1.6e-27 128.3 232 35.8
Sed0025005 Sechium edule HOM05D002567 ORTHO05D007435 1.6e-27 128.3 326 31.0
Ca_10357_v3 Cicer arietinum L. HOM05D002567 ORTHO05D007435 2.7e-27 127.5 324 29.3
QL12p030562 Quercus lobata HOM05D002567 ORTHO05D007435 3.6e-27 127.1 354 28.0
AUR62033190 Chenopodium quinoa HOM05D002567 ORTHO05D007435 6.1e-27 126.3 234 33.8
Nitab4.5_0001447g0040 Nicotiana tabacum HOM05D002567 ORTHO05D007435 6.1e-27 126.3 219 36.1
PSO832G0331 Papaver somniferum HOM05D002567 ORTHO05D007435 6.1e-27 126.3 320 29.7
SalBow3G3633 Salvia bowleyana HOM05D002567 ORTHO05D007435 6.1e-27 126.3 325 29.5
Ciclev10019856m.g Citrus clementina HOM05D002567 ORTHO05D007435 8.0e-27 125.9 318 29.9
FAN20G2691 Fragaria x ananassa HOM05D002567 ORTHO05D007435 8.0e-27 125.9 370 29.2
ATR0706G146 Amborella trichopoda HOM05D002567 ORTHO05D007435 1.0e-26 125.6 324 30.2
AUR62043263 Chenopodium quinoa HOM05D002567 ORTHO05D007435 1.0e-26 125.6 234 33.8
PGSC0003DMG402011364 Solanum tuberosum HOM05D002567 ORTHO05D007435 1.0e-26 125.6 231 34.6
Sopen09g029600 Solanum pennellii HOM05D002567 ORTHO05D007435 1.4e-26 125.2 231 34.2
Sc05g0004310 Simmondsia chinensis HOM05D002567 ORTHO05D007435 1.8e-26 124.8 320 29.7
CiPaw.07G103700 Carya illinoinensis HOM05D002567 ORTHO05D007435 2.3e-26 124.4 324 29.0
RcHm_v2.0_Chr6g0293181 Rosa chinensis HOM05D002567 ORTHO05D007435 2.3e-26 124.4 359 29.8
TAR365G0282 Trochodendron aralioides HOM05D002567 ORTHO05D007435 2.3e-26 124.4 324 29.0
Manes.05G065800 Manihot esculenta HOM05D002567 ORTHO05D007435 3.0e-26 124.0 320 30.0
SGA_v2.0_scaffold1G00388 Striga asiatica HOM05D002567 ORTHO05D007435 3.0e-26 124.0 320 30.3
PGR044G2614 Punica granatum HOM05D002567 ORTHO05D007435 5.2e-26 123.2 322 30.4
Gohir.A08G074500 Gossypium hirsutum HOM05D002567 ORTHO05D007435 6.8e-26 122.9 321 30.2
Gohir.D08G083800 Gossypium hirsutum HOM05D002567 ORTHO05D007435 6.8e-26 122.9 321 30.5
Duzib133G1128 Durio zibethinus HOM05D002567 ORTHO05D007435 8.8e-26 122.5 237 33.8
Cfa005987 Carpinus fangiana HOM05D002567 ORTHO05D007435 1.5e-25 121.7 306 28.1
Gorai.004G088200 Gossypium raimondii HOM05D002567 ORTHO05D007435 1.5e-25 121.7 321 30.2
Hund05401 Selenicereus undatus HOM05D002567 ORTHO05D007435 2.6e-25 120.9 339 29.5
Haze_04858 Corylus avellana HOM05D002567 ORTHO05D006538 4.4e-25 120.2 307 28.7
Prupe.8G255700 Prunus persica HOM05D002567 ORTHO05D007435 5.7e-25 119.8 325 28.3
CANSAT25G3369 Cannabis sativa HOM05D002567 ORTHO05D007435 2.2e-24 117.9 322 28.9
HPP92_011840 Vanilla planifolia HOM05D002567 ORTHO05D007435 2.8e-24 117.5 243 32.5
Eucgr.K03452 Eucalyptus grandis HOM05D002567 ORTHO05D007435 8.3e-24 115.9 322 28.3
Rhsim01G0282400 Rhododendron simsii HOM05D002567 ORTHO05D007435 1.1e-23 115.5 323 29.1
CSS0004593 Camellia sinensis var. sinensis HOM05D002567 ORTHO05D007435 1.4e-23 115.2 308 28.9
CSS0018114 Camellia sinensis var. sinensis HOM05D002567 ORTHO05D007435 1.4e-23 115.2 308 28.9
Pp3c14_1830 Physcomitrium patens HOM05D002567 ORTHO05D007435 2.4e-23 114.4 359 28.1
vmacro14988 Vaccinium macrocarpon HOM05D002567 ORTHO05D007435 7.0e-23 112.8 307 29.3
Solyc09g074740.2 Solanum lycopersicum HOM05D002567 ORTHO05D007435 1.1e-20 105.5 185 35.1
Peaxi162Scf00067g01814 Petunia axillaris HOM05D002567 ORTHO05D007435 1.9e-20 104.8 213 33.3
MELO3C016044.2 Cucumis melo HOM05D002567 ORTHO05D007435 2.7e-19 100.9 229 29.7
FAN19G1365 Fragaria x ananassa HOM05D002567 ORTHO05D007435 4.7e-19 100.1 187 35.3
Ah.15g093860 Amaranthus hybridus HOM05D002567 ORTHO05D007435 1.0e-18 99.0 180 33.3
PRCOL_00000973 Prasinoderma coloniale HOM05D002567 ORTHO05D007435 1.8e-18 98.2 287 31.4
MCO08G095 Micromonas commoda HOM05D002567 ORTHO05D007435 3.0e-18 97.4 302 27.8
Atru.chr5.1231 Acer truncatum HOM05D002567 ORTHO05D007435 5.7e-17 93.2 180 32.8
Hma1.2p1_0399F.1_g143930 Hydrangea macrophylla HOM05D002567 ORTHO05D007435 9.8e-17 92.4 254 29.9
Dinv19731 Davidia involucrata HOM05D002567 ORTHO05D007435 2.8e-16 90.9 265 29.8
AUR62033191 Chenopodium quinoa HOM05D002567 ORTHO05D007435 3.8e-13 80.5 169 32.0
Carub.0004s3055 Capsella rubella HOM05D002567 ORTHO05D007435 6.6e-13 79.7 238 29.0
Potri.002G209023 Populus trichocarpa HOM05D002567 ORTHO05D007435 3.3e-12 77.4 178 29.2
CsaV3_7G028940 Cucumis sativus L. HOM05D002567 ORTHO05D007435 5.5e-12 76.6 210 29.5
Zm00001eb016640 Zea mays HOM05D002567 ORTHO05D007435 1.8e-10 71.6 178 30.9
CDE02G2579 Ceratophyllum demersum HOM05D002567 ORTHO05D007435 1.3e-08 65.5 157 27.4
Sed0015917 Sechium edule HOM05D002567 ORTHO05D007435 1.2e-06 58.9 199 27.6


User provided reference genes

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