Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa024731 Carpinus fangiana HOM05D004703 ORTHO05D005801 1.1e-193 679.9 359 100.0
Mapoly0093s0020 Marchantia polymorpha HOM05D004703 ORTHO05D005801 1.8e-34 151.0 228 43.4
CsaV3_5G003450 Cucumis sativus L. HOM05D004703 ORTHO05D005801 6.7e-34 149.1 258 40.3
Solyc08g079820.3 Solanum lycopersicum HOM05D004703 ORTHO05D005801 3.3e-33 146.7 228 43.0
PGSC0003DMG400003941 Solanum tuberosum HOM05D004703 ORTHO05D005801 5.7e-33 146.0 228 43.0
Sopen08g028180 Solanum pennellii HOM05D004703 ORTHO05D005801 9.7e-33 145.2 228 42.5
CSS0006775 Camellia sinensis var. sinensis HOM05D004703 ORTHO05D005801 1.3e-32 144.8 227 43.2
CBR_g30593 Chara braunii HOM05D004703 ORTHO05D005801 4.8e-32 142.9 229 42.8
Nitab4.5_0005167g0040 Nicotiana tabacum HOM05D004703 ORTHO05D005801 4.8e-32 142.9 307 37.1
Nitab4.5_0012494g0020 Nicotiana tabacum HOM05D004703 ORTHO05D005801 4.8e-32 142.9 307 37.1
Pp3c15_11750 Physcomitrium patens HOM05D004703 ORTHO05D005801 6.3e-32 142.5 220 41.8
CAN.G630.24 Capsicum annuum HOM05D004703 ORTHO05D005801 8.2e-32 142.1 228 41.7
Sed0028019 Sechium edule HOM05D004703 ORTHO05D005801 1.1e-31 141.7 227 40.5
Hma1.2p1_0138F.1_g062820 Hydrangea macrophylla HOM05D004703 ORTHO05D005801 1.4e-31 141.4 228 41.7
Thhalv10028825m.g Eutrema salsugineum HOM05D004703 ORTHO05D005801 3.1e-31 140.2 225 39.1
Cc08_g13610 Coffea canephora HOM05D004703 ORTHO05D005801 4.1e-31 139.8 228 41.7
DCAR_006785 Daucus carota HOM05D004703 ORTHO05D005801 5.3e-31 139.4 228 41.2
Os06g0129700 Oryza sativa ssp. japonica HOM05D004703 ORTHO05D005801 6.9e-31 139.0 329 36.2
CARHR254310 Cardamine hirsuta HOM05D004703 ORTHO05D005801 1.2e-30 138.3 290 35.5
ClCG01G003390 Citrullus lanatus HOM05D004703 ORTHO05D005801 1.2e-30 138.3 220 41.4
AL6G46750 Arabidopsis lyrata HOM05D004703 ORTHO05D005801 2.6e-30 137.1 225 38.2
FvH4_5g01080 Fragaria vesca HOM05D004703 ORTHO05D005801 2.6e-30 137.1 227 40.1
EL10Ac5g12672 Beta vulgaris HOM05D004703 ORTHO05D005801 1.0e-29 135.2 307 36.5
FAN18G3460 Fragaria x ananassa HOM05D004703 ORTHO05D005801 1.0e-29 135.2 227 39.6
Cpa.g.sc29.48 Carica papaya HOM05D004703 ORTHO05D005801 1.3e-29 134.8 221 42.5
arahy.Tifrunner.gnm1.ann1.RRY62Q Arachis hypogaea HOM05D004703 ORTHO05D005801 1.7e-29 134.4 228 39.9
AUR62010550 Chenopodium quinoa HOM05D004703 ORTHO05D005801 1.7e-29 134.4 297 37.0
Peaxi162Scf00620g00231 Petunia axillaris HOM05D004703 ORTHO05D005801 1.7e-29 134.4 318 35.2
FAN13G0401 Fragaria x ananassa HOM05D004703 ORTHO05D005801 2.2e-29 134.0 227 40.1
Potri.003G118300 Populus trichocarpa HOM05D004703 ORTHO05D005801 2.2e-29 134.0 256 37.5
RcHm_v2.0_Chr7g0200241 Rosa chinensis HOM05D004703 ORTHO05D005801 2.2e-29 134.0 323 34.7
THA.LOC104806355 Tarenaya hassleriana HOM05D004703 ORTHO05D005801 2.2e-29 134.0 230 39.1
CANSAT21G0478 Cannabis sativa HOM05D004703 ORTHO05D005801 2.9e-29 133.7 336 35.7
CiPaw.11G143800 Carya illinoinensis HOM05D004703 ORTHO05D005801 2.9e-29 133.7 228 40.4
BcaC04g21182 Brassica carinata HOM05D004703 ORTHO05D005801 3.8e-29 133.3 297 34.0
Dinv37721 Davidia involucrata HOM05D004703 ORTHO05D005801 3.8e-29 133.3 228 40.8
Migut.A00879 Erythranthe guttata HOM05D004703 ORTHO05D005801 3.8e-29 133.3 228 39.9
PSO478G3008 Papaver somniferum HOM05D004703 ORTHO05D005801 3.8e-29 133.3 230 39.6
Prupe.5G084800 Prunus persica HOM05D004703 ORTHO05D005801 3.8e-29 133.3 339 33.0
SalBow6G2643 Salvia bowleyana HOM05D004703 ORTHO05D005801 3.8e-29 133.3 232 39.2
GSVIVG01019903001 Vitis vinifera HOM05D004703 ORTHO05D005801 3.8e-29 133.3 228 39.5
Ah.02g116260 Amaranthus hybridus HOM05D004703 ORTHO05D005801 5.0e-29 132.9 228 37.7
Oeu001909.1 Olea europaea HOM05D004703 ORTHO05D005801 5.0e-29 132.9 228 38.6
Haze_09002 Corylus avellana HOM05D004703 ORTHO05D005801 6.5e-29 132.5 339 35.1
MD04G1073000 Malus domestica HOM05D004703 ORTHO05D005801 6.5e-29 132.5 329 33.7
TAR629G2760 Trochodendron aralioides HOM05D004703 ORTHO05D005801 6.5e-29 132.5 302 35.8
BolC9t56293H Brassica oleracea HOM05D004703 ORTHO05D005801 8.5e-29 132.1 375 33.1
CSS0042147 Camellia sinensis var. sinensis HOM05D004703 ORTHO05D005801 8.5e-29 132.1 337 36.5
AUR62017343 Chenopodium quinoa HOM05D004703 ORTHO05D005801 8.5e-29 132.1 304 35.9
Manes.01G070700 Manihot esculenta HOM05D004703 ORTHO05D005801 8.5e-29 132.1 229 39.3
PSO478G3534 Papaver somniferum HOM05D004703 ORTHO05D005801 8.5e-29 132.1 281 36.3
PSO782G3959 Papaver somniferum HOM05D004703 ORTHO05D005801 1.1e-28 131.7 281 36.7
PGR042G1634 Punica granatum HOM05D004703 ORTHO05D005801 1.4e-28 131.3 227 39.2
C09p34490 Brassica napus HOM05D004703 ORTHO05D005801 1.9e-28 131.0 369 30.9
Lsat_1_v5_gn_6_10661 Lactuca sativa HOM05D004703 ORTHO05D005801 1.9e-28 131.0 228 39.5
Psat4g069480 Pisum sativum HOM05D004703 ORTHO05D005801 1.9e-28 131.0 228 38.2
RcHm_v2.0_Chr6g0265101 Rosa chinensis HOM05D004703 ORTHO05D005801 2.5e-28 130.6 289 35.6
RcHm_v2.0_Chr6g0265181 Rosa chinensis HOM05D004703 ORTHO05D005801 2.5e-28 130.6 280 35.7
AT4G11980 Arabidopsis thaliana HOM05D004703 ORTHO05D005801 3.2e-28 130.2 332 32.2
QL12p016126 Quercus lobata HOM05D004703 ORTHO05D005801 3.2e-28 130.2 335 34.3
QL12p016291 Quercus lobata HOM05D004703 ORTHO05D005801 3.2e-28 130.2 335 34.3
Carub.0006s3108 Capsella rubella HOM05D004703 ORTHO05D005801 5.5e-28 129.4 335 31.6
Ca_12294_v3 Cicer arietinum L. HOM05D004703 ORTHO05D005801 5.5e-28 129.4 228 38.6
COL.COLO4_23815 Corchorus olitorius HOM05D004703 ORTHO05D005801 5.5e-28 129.4 303 36.3
Hund14696 Selenicereus undatus HOM05D004703 ORTHO05D005801 5.5e-28 129.4 228 38.6
Ciclev10021310m.g Citrus clementina HOM05D004703 ORTHO05D005801 7.2e-28 129.0 319 32.9
Atru.chr9.1491 Acer truncatum HOM05D004703 ORTHO05D005801 9.4e-28 128.6 328 33.8
Rhsim08G0184400 Rhododendron simsii HOM05D004703 ORTHO05D005801 9.4e-28 128.6 228 38.6
Actinidia14493 Actinidia chinensis HOM05D004703 ORTHO05D005801 1.6e-27 127.9 316 34.5
SMO140G0070 Selaginella moellendorffii HOM05D004703 ORTHO05D005801 1.6e-27 127.9 219 40.2
Duzib084G1157 Durio zibethinus HOM05D004703 ORTHO05D005801 2.1e-27 127.5 303 35.6
Medtr4g101830 Medicago truncatula HOM05D004703 ORTHO05D005801 2.1e-27 127.5 302 34.4
SGA_v2.0_scaffold37G14871 Striga asiatica HOM05D004703 ORTHO05D005801 2.7e-27 127.1 229 39.3
CDE04G3458 Ceratophyllum demersum HOM05D004703 ORTHO05D005801 3.6e-27 126.7 228 38.2
Lj2A203G54 Lonicera japonica HOM05D004703 ORTHO05D005801 3.6e-27 126.7 258 36.8
VMungo0251G1252 Vigna mungo HOM05D004703 ORTHO05D005801 3.6e-27 126.7 227 37.9
Lalb_Chr05g0225211 Lupinus albus HOM05D004703 ORTHO05D005801 6.1e-27 125.9 301 35.9
HPP92_020651 Vanilla planifolia HOM05D004703 ORTHO05D005801 7.9e-27 125.6 227 38.3
Gohir.D09G188100 Gossypium hirsutum HOM05D004703 ORTHO05D005801 1.0e-26 125.2 338 35.2
TPR.G37619 Trifolium pratense HOM05D004703 ORTHO05D005801 1.0e-26 125.2 303 33.3
BcaB01g01695 Brassica carinata HOM05D004703 ORTHO05D005801 1.4e-26 124.8 334 31.4
Thecc.03G266100 Theobroma cacao HOM05D004703 ORTHO05D005801 1.4e-26 124.8 340 34.1
ECA233G5834 Erigeron canadensis HOM05D004703 ORTHO05D005801 1.8e-26 124.4 228 38.6
Eucgr.E00504 Eucalyptus grandis HOM05D004703 ORTHO05D005801 2.3e-26 124.0 339 34.2
Lj4g0003091 Lotus japonicus HOM05D004703 ORTHO05D005801 2.3e-26 124.0 302 33.8
unitig_22.g5479 Utricularia gibba HOM05D004703 ORTHO05D005801 2.3e-26 124.0 228 37.7
Glyma.05G054900 Glycine max HOM05D004703 ORTHO05D005801 3.0e-26 123.6 227 38.3
Phvul.003G216900 Phaseolus vulgaris HOM05D004703 ORTHO05D005801 5.1e-26 122.9 227 37.9
Gohir.A09G193900 Gossypium hirsutum HOM05D004703 ORTHO05D005801 8.8e-26 122.1 337 34.7
Gorai.006G210900 Gossypium raimondii HOM05D004703 ORTHO05D005801 8.8e-26 122.1 338 34.6
VMungo0251G1928 Vigna mungo HOM05D004703 ORTHO05D005801 8.8e-26 122.1 223 37.7
Aqoxy7G00537 Aquilegia oxysepala HOM05D004703 ORTHO05D005801 1.1e-25 121.7 340 34.4
TWI15G0205 Tripterygium wilfordii HOM05D004703 ORTHO05D005801 1.1e-25 121.7 346 31.8
A09p27170 Brassica napus HOM05D004703 ORTHO05D005801 1.5e-25 121.3 247 34.4
HanXRQChr07g0186971 Helianthus annuus HOM05D004703 ORTHO05D005801 2.0e-25 120.9 228 37.7
Glyma.05G054800 Glycine max HOM05D004703 ORTHO05D005801 4.3e-25 119.8 300 33.7
Ah.12g053460 Amaranthus hybridus HOM05D004703 ORTHO05D005801 1.7e-24 117.9 366 31.1
Ah.12g057950 Amaranthus hybridus HOM05D004703 ORTHO05D005801 1.7e-24 117.9 366 31.1
Aa31LG9G10490 Aethionema arabicum HOM05D004703 ORTHO05D005801 6.3e-24 115.9 224 36.6
arahy.Tifrunner.gnm1.ann1.TVWC12 Arachis hypogaea HOM05D004703 ORTHO05D005801 1.8e-23 114.4 191 40.3
Sabra03G0082300 Salix brachista HOM05D004703 ORTHO05D005801 2.4e-23 114.0 335 32.5
MBI04_g28556_MAGBIO Magnolia biondii HOM05D004703 ORTHO05D005801 9.1e-23 112.1 333 32.1
FAN08G2483 Fragaria x ananassa HOM05D004703 ORTHO05D005801 3.4e-22 110.2 189 40.2
AagrBONN_evm.TU.Sc2ySwM_344.4389 Anthoceros agrestis HOM05D004703 ORTHO05D005801 2.2e-21 107.5 173 41.6
MELO3C005608.2 Cucumis melo HOM05D004703 ORTHO05D005801 2.8e-16 90.5 432 27.8
BcaB04g18565 Brassica carinata HOM05D004703 ORTHO05D005801 3.1e-15 87.0 189 33.9
Zm00001eb378400 Zea mays HOM05D004703 ORTHO05D005801 7.0e-15 85.9 167 38.3
ATR0905G001 Amborella trichopoda HOM05D004703 ORTHO05D005801 9.1e-15 85.5 128 39.8
Nn1g00505 Nelumbo nucifera HOM05D004703 ORTHO05D005801 2.6e-14 84.0 156 39.1
BcaB02g09202 Brassica carinata HOM05D004703 ORTHO05D005801 3.5e-14 83.6 189 32.8
MSTRG.25560 Avicennia marina HOM05D004703 ORTHO05D005801 6.5e-13 79.3 140 40.0
RcHm_v2.0_Chr0c37g0502981 Rosa chinensis HOM05D004703 ORTHO05D005801 1.1e-12 78.6 144 36.1
vmacro19246 Vaccinium macrocarpon HOM05D004703 ORTHO05D005801 1.1e-12 78.6 139 38.1
Sc07g0009460 Simmondsia chinensis HOM05D004703 ORTHO05D005801 1.9e-12 77.8 154 36.4
arahy.Tifrunner.gnm1.ann1.HPWZ3I Arachis hypogaea HOM05D004703 ORTHO05D005801 2.5e-12 77.4 139 38.8
BcaC01g04204 Brassica carinata HOM05D004703 ORTHO05D005801 7.4e-09 65.9 128 35.9
ATR0251G001 Amborella trichopoda HOM05D004703 ORTHO05D005801 1.1e-07 62.0 92 39.1
Zm00001eb279110 Zea mays HOM05D004703 ORTHO05D005801 9.1e-07 58.9 97 41.2
vmacro19247 Vaccinium macrocarpon HOM05D004703 ORTHO05D005801 1.2e-06 58.5 74 45.9
arahy.Tifrunner.gnm1.ann1.0W2QGA Arachis hypogaea HOM05D004703 ORTHO05D005801 3.5e-06 57.0 123 38.2


User provided reference genes

Program Settings