Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa024705 Carpinus fangiana HOM05D006333 ORTHO05D007799 2.4e-170 602.1 302 100.0
Cfa023716 Carpinus fangiana HOM05D006333 ORTHO05D007799 2.5e-21 107.1 279 30.1
SMO116G0442 Selaginella moellendorffii HOM05D006333 ORTHO05D007799 1.9e-18 97.4 208 35.6
Cre05.g234647 Chlamydomonas reinhardtii HOM05D006333 ORTHO05D007799 1.4e-16 91.3 213 33.3
THA.LOC104808350 Tarenaya hassleriana HOM05D006333 ORTHO05D007799 1.4e-16 91.3 195 35.9
PRCOL_00000482 Prasinoderma coloniale HOM05D006333 ORTHO05D007799 1.8e-16 90.9 215 34.9
BraA06t24479Z Brassica rapa HOM05D006333 ORTHO05D007799 2.4e-16 90.5 191 34.6
A06p13260 Brassica napus HOM05D006333 ORTHO05D007799 5.3e-16 89.4 191 34.0
Thhalv10008690m.g Eutrema salsugineum HOM05D006333 ORTHO05D007799 6.9e-16 89.0 191 34.6
BolC5t30276H Brassica oleracea HOM05D006333 ORTHO05D007799 9.0e-16 88.6 191 34.0
CARHR017920 Cardamine hirsuta HOM05D006333 ORTHO05D007799 9.0e-16 88.6 191 35.6
FvH4_4g36970 Fragaria vesca HOM05D006333 ORTHO05D007799 9.0e-16 88.6 190 33.2
BcaC05g25649 Brassica carinata HOM05D006333 ORTHO05D007799 1.2e-15 88.2 191 34.0
Aa31LG7G2140 Aethionema arabicum HOM05D006333 ORTHO05D007799 1.5e-15 87.8 195 34.4
CANSAT56G2519 Cannabis sativa HOM05D006333 ORTHO05D007799 1.5e-15 87.8 193 32.6
FAN07G1904 Fragaria x ananassa HOM05D006333 ORTHO05D007799 1.5e-15 87.8 190 33.2
Sp1g15450 Schrenkiella parvula HOM05D006333 ORTHO05D007799 1.5e-15 87.8 191 34.0
CsaV3_3G031750 Cucumis sativus L. HOM05D006333 ORTHO05D007799 2.6e-15 87.0 195 32.8
AT1G17330 Arabidopsis thaliana HOM05D006333 ORTHO05D007799 3.4e-15 86.7 195 34.4
C05p15710 Brassica napus HOM05D006333 ORTHO05D007799 3.4e-15 86.7 191 33.5
Carub.0001s1708 Capsella rubella HOM05D006333 ORTHO05D007799 3.4e-15 86.7 191 33.5
Prupe.1G347700 Prunus persica HOM05D006333 ORTHO05D007799 3.4e-15 86.7 217 31.3
BcaB07g34033 Brassica carinata HOM05D006333 ORTHO05D007799 4.5e-15 86.3 191 33.5
Lj3g0001632 Lotus japonicus HOM05D006333 ORTHO05D007799 5.9e-15 85.9 191 33.0
MELO3C024016.2 Cucumis melo HOM05D006333 ORTHO05D007799 7.6e-15 85.5 195 32.8
AL1G29580 Arabidopsis lyrata HOM05D006333 ORTHO05D007799 1.0e-14 85.1 191 33.5
ECA233G4371 Erigeron canadensis HOM05D006333 ORTHO05D007799 1.0e-14 85.1 198 32.8
RcHm_v2.0_Chr4g0446761 Rosa chinensis HOM05D006333 ORTHO05D007799 1.3e-14 84.7 190 31.6
Ciclev10032700m.g Citrus clementina HOM05D006333 ORTHO05D007799 1.7e-14 84.3 190 32.6
HanXRQChr12g0366301 Helianthus annuus HOM05D006333 ORTHO05D007799 1.7e-14 84.3 198 32.8
Eucgr.J00869 Eucalyptus grandis HOM05D006333 ORTHO05D007799 2.2e-14 84.0 208 31.7
Prupe.1G347900 Prunus persica HOM05D006333 ORTHO05D007799 2.9e-14 83.6 217 30.4
Medtr4g023480 Medicago truncatula HOM05D006333 ORTHO05D007799 3.8e-14 83.2 213 29.6
Pp3c7_23360 Physcomitrium patens HOM05D006333 ORTHO05D007799 3.8e-14 83.2 210 31.9
Duzib132G1109 Durio zibethinus HOM05D006333 ORTHO05D007799 5.0e-14 82.8 195 33.8
Migut.A00709 Erythranthe guttata HOM05D006333 ORTHO05D007799 6.5e-14 82.4 191 31.9
VMungo1127G0165 Vigna mungo HOM05D006333 ORTHO05D007799 8.4e-14 82.0 194 30.9
Glyma.12G026000 Glycine max HOM05D006333 ORTHO05D007799 1.1e-13 81.6 222 31.5
MBI06_g42293_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 1.1e-13 81.6 196 32.7
Sc17g0000100 Simmondsia chinensis HOM05D006333 ORTHO05D007799 1.1e-13 81.6 213 30.5
PGR044G2499 Punica granatum HOM05D006333 ORTHO05D007799 1.4e-13 81.3 191 33.5
ATR0618G379 Amborella trichopoda HOM05D006333 ORTHO05D007799 1.9e-13 80.9 194 30.9
Lsat_1_v5_gn_8_33120 Lactuca sativa HOM05D006333 ORTHO05D007799 1.9e-13 80.9 197 31.5
MD13G1004800 Malus domestica HOM05D006333 ORTHO05D007799 1.9e-13 80.9 215 31.2
PSO782G2700 Papaver somniferum HOM05D006333 ORTHO05D007799 1.9e-13 80.9 191 31.9
Peaxi162Scf00334g00421 Petunia axillaris HOM05D006333 ORTHO05D007799 1.9e-13 80.9 194 33.0
EL10Ac9g22952 Beta vulgaris HOM05D006333 ORTHO05D007799 2.5e-13 80.5 214 30.4
Manes.04G057700 Manihot esculenta HOM05D006333 ORTHO05D007799 2.5e-13 80.5 195 34.4
Phvul.011G028900 Phaseolus vulgaris HOM05D006333 ORTHO05D007799 2.5e-13 80.5 194 31.4
GSVIVG01012055001 Vitis vinifera HOM05D006333 ORTHO05D007799 2.5e-13 80.5 196 32.1
Lj3A849G43 Lonicera japonica HOM05D006333 ORTHO05D007799 3.2e-13 80.1 195 31.8
CAN.G1011.5 Capsicum annuum HOM05D006333 ORTHO05D007799 4.2e-13 79.7 195 30.8
Potri.007G072000 Populus trichocarpa HOM05D006333 ORTHO05D007799 4.2e-13 79.7 193 33.2
unitig_32.g11605 Utricularia gibba HOM05D006333 ORTHO05D007799 4.2e-13 79.7 192 32.8
CiPaw.05G169800 Carya illinoinensis HOM05D006333 ORTHO05D007799 5.5e-13 79.3 222 32.0
Psat7g233400 Pisum sativum HOM05D006333 ORTHO05D007799 5.5e-13 79.3 190 32.1
Sed0022709 Sechium edule HOM05D006333 ORTHO05D007799 5.5e-13 79.3 199 32.2
Sopen02g004090 Solanum pennellii HOM05D006333 ORTHO05D007799 5.5e-13 79.3 191 31.4
Ca_19901_v3 Cicer arietinum L. HOM05D006333 ORTHO05D007799 9.3e-13 78.6 214 29.9
Gohir.D13G061500 Gossypium hirsutum HOM05D006333 ORTHO05D007799 9.3e-13 78.6 197 34.0
Gorai.013G070000 Gossypium raimondii HOM05D006333 ORTHO05D007799 1.2e-12 78.2 201 33.8
Rhsim09G0071800 Rhododendron simsii HOM05D006333 ORTHO05D007799 1.2e-12 78.2 218 29.8
Nn5g28807 Nelumbo nucifera HOM05D006333 ORTHO05D007799 1.6e-12 77.8 195 31.8
Nitab4.5_0003092g0070 Nicotiana tabacum HOM05D006333 ORTHO05D007799 2.1e-12 77.4 195 31.3
Nitab4.5_0008825g0020 Nicotiana tabacum HOM05D006333 ORTHO05D007799 2.1e-12 77.4 214 29.9
Atru.chr11.1164 Acer truncatum HOM05D006333 ORTHO05D007799 2.7e-12 77.0 196 33.2
DCAR_008496 Daucus carota HOM05D003141 ORTHO05D003633 2.7e-12 77.0 183 32.8
Gohir.A13G060400 Gossypium hirsutum HOM05D006333 ORTHO05D007799 2.7e-12 77.0 197 34.0
Hund24376 Selenicereus undatus HOM05D006333 ORTHO05D007799 2.7e-12 77.0 195 32.3
Thecc.02G159600 Theobroma cacao HOM05D006333 ORTHO05D007799 2.7e-12 77.0 192 30.7
TPR.G9857 Trifolium pratense HOM05D006333 ORTHO05D007799 2.7e-12 77.0 156 32.1
MSTRG.11948 Avicennia marina HOM05D006333 ORTHO05D007799 3.5e-12 76.6 191 31.4
Solyc02g014720.4 Solanum lycopersicum HOM05D006333 ORTHO05D007799 3.5e-12 76.6 210 29.5
TWI53G1586 Tripterygium wilfordii HOM05D006333 ORTHO05D007799 3.5e-12 76.6 218 30.3
Cfa008751 Carpinus fangiana HOM05D006333 ORTHO05D007799 4.6e-12 76.3 199 33.2
COL.COLO4_08588 Corchorus olitorius HOM05D006333 ORTHO05D007799 4.6e-12 76.3 198 32.3
Atru.chr11.2676 Acer truncatum HOM05D006333 ORTHO05D007799 1.0e-11 75.1 191 33.0
Os10g0486000 Oryza sativa ssp. japonica HOM05D006333 ORTHO05D007799 1.0e-11 75.1 196 30.6
Atru.chr11.2675 Acer truncatum HOM05D006333 ORTHO05D007799 1.3e-11 74.7 191 31.9
Actinidia11766 Actinidia chinensis HOM05D006333 ORTHO05D007799 1.3e-11 74.7 171 35.1
arahy.Tifrunner.gnm1.ann1.A0JP3J Arachis hypogaea HOM05D006333 ORTHO05D007799 1.8e-11 74.3 228 29.8
CSS0049289 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 1.8e-11 74.3 194 32.0
Cc11_g02420 Coffea canephora HOM05D006333 ORTHO05D007799 1.8e-11 74.3 187 30.5
Hma1.2p1_0044F.1_g026090 Hydrangea macrophylla HOM05D006333 ORTHO05D007799 1.8e-11 74.3 195 31.3
Lalb_Chr01g0001411 Lupinus albus HOM05D006333 ORTHO05D007799 1.8e-11 74.3 182 28.0
arahy.Tifrunner.gnm1.ann1.N7V6FU Arachis hypogaea HOM05D006333 ORTHO05D007799 5.1e-11 72.8 242 29.8
Aqoxy3G04253 Aquilegia oxysepala HOM05D006333 ORTHO05D007799 6.7e-11 72.4 190 30.5
FAN17G3063 Fragaria x ananassa HOM05D006333 ORTHO05D007799 6.7e-11 72.4 214 29.0
SGA_v2.0_scaffold146G36264 Striga asiatica HOM05D006333 ORTHO05D007799 6.7e-11 72.4 151 31.8
Ah.01g001500 Amaranthus hybridus HOM05D006333 ORTHO05D007799 1.1e-10 71.6 183 31.7
CSS0015547 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 1.1e-10 71.6 192 29.2
Dinv17616 Davidia involucrata HOM05D006333 ORTHO05D007799 1.5e-10 71.2 208 29.3
MCO07G572 Micromonas commoda HOM05D006333 ORTHO05D007799 2.5e-10 70.5 197 32.0
FAN12G1853 Fragaria x ananassa HOM05D006333 ORTHO05D007799 2.2e-09 67.4 196 32.1
HPP92_008575 Vanilla planifolia HOM05D006333 ORTHO05D007799 3.7e-09 66.6 191 28.3
ClCG10G012010 Citrullus lanatus HOM05D006333 ORTHO05D007799 8.2e-09 65.5 190 28.9
Eucgr.J00870 Eucalyptus grandis HOM05D006333 ORTHO05D007799 1.8e-08 64.3 190 31.1
PSO063G3232 Papaver somniferum HOM05D006333 ORTHO05D007799 5.3e-08 62.8 238 28.6
Sabra07G0060700 Salix brachista HOM05D006333 ORTHO05D007799 1.2e-07 61.6 224 28.6
SalBow7G0482 Salvia bowleyana HOM05D006333 ORTHO05D007799 2.2e-06 57.4 159 28.3
Mapoly0006s0058 Marchantia polymorpha HOM05D006333 ORTHO05D007799 6.5e-06 55.8 87 36.8
SGA_v2.0_scaffold173G39125 Striga asiatica HOM05D006333 ORTHO05D007799 6.5e-06 55.8 145 29.0


User provided reference genes

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