Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa024622 Carpinus fangiana HOM05D003845 ORTHO05D004161 0.0e+00 3904.0 2051 100.0
Mapoly0101s0033 Marchantia polymorpha HOM05D003845 ORTHO05D004161 2.5e-40 172.9 746 23.5
Pp3c15_3000 Physcomitrium patens HOM05D003845 ORTHO05D004161 4.7e-39 168.7 1282 21.6
HanXRQChr14g0438731 Helianthus annuus HOM05D003845 ORTHO05D004161 2.2e-36 159.8 667 24.1
BolC6t39126H Brassica oleracea HOM05D003845 ORTHO05D004161 1.2e-34 154.1 618 24.4
C06p43130 Brassica napus HOM05D003845 ORTHO05D004161 2.0e-34 153.3 618 24.4
AagrBONN_evm.TU.Sc2ySwM_368.2329__2330 Anthoceros agrestis HOM05D003845 ORTHO05D004161 4.5e-34 152.1 687 22.1
Lsat_1_v5_gn_4_153700 Lactuca sativa HOM05D003845 ORTHO05D004161 7.7e-34 151.4 747 24.6
A07p33800 Brassica napus HOM05D003845 ORTHO05D004161 1.0e-33 151.0 618 24.3
BraA07t31006Z Brassica rapa HOM05D003845 ORTHO05D004161 1.0e-33 151.0 618 24.3
SalBow3G0178 Salvia bowleyana HOM05D003845 ORTHO05D004161 1.3e-33 150.6 567 24.3
Sp5g22090 Schrenkiella parvula HOM05D003845 ORTHO05D004161 1.3e-33 150.6 618 24.6
TAR629G0674 Trochodendron aralioides HOM05D003845 ORTHO05D004161 2.9e-33 149.4 548 24.6
unitig_899.g14511 Utricularia gibba HOM05D003845 ORTHO05D004161 2.9e-33 149.4 635 23.9
Thhalv10017993m.g Eutrema salsugineum HOM05D003845 ORTHO05D004161 3.8e-33 149.1 512 25.6
Carub.0002s1343 Capsella rubella HOM05D003845 ORTHO05D004161 6.5e-33 148.3 623 24.6
AL2G25520 Arabidopsis lyrata HOM05D003845 ORTHO05D004161 1.9e-32 146.7 623 24.2
ECA232G1957 Erigeron canadensis HOM05D003845 ORTHO05D004161 1.9e-32 146.7 1146 22.2
Dinv33933 Davidia involucrata HOM05D003845 ORTHO05D004161 2.5e-32 146.4 541 24.8
Lj1g0009000 Lotus japonicus HOM05D003845 ORTHO05D004161 3.2e-32 146.0 563 24.0
Gorai.001G080300 Gossypium raimondii HOM05D003845 ORTHO05D004161 9.4e-32 144.4 538 25.1
Lalb_Chr21g0317871 Lupinus albus HOM05D003845 ORTHO05D004161 9.4e-32 144.4 720 23.3
ATR0564G046 Amborella trichopoda HOM05D003845 ORTHO05D004161 1.6e-31 143.7 567 24.2
Aa31LG2G3530 Aethionema arabicum HOM05D003845 ORTHO05D004161 2.7e-31 142.9 617 24.3
Gohir.A07G071701 Gossypium hirsutum HOM05D003845 ORTHO05D004161 2.7e-31 142.9 537 25.0
AT1G67140 Arabidopsis thaliana HOM05D003845 ORTHO05D004161 3.6e-31 142.5 623 23.9
Glyma.18G297900 Glycine max HOM05D003845 ORTHO05D004161 3.6e-31 142.5 535 24.9
Migut.H00208 Erythranthe guttata HOM05D003845 ORTHO05D004161 4.7e-31 142.1 737 23.3
Actinidia36313 Actinidia chinensis HOM05D003845 ORTHO05D004161 6.1e-31 141.7 564 24.3
Psat3g206280 Pisum sativum HOM05D003845 ORTHO05D004161 6.1e-31 141.7 541 25.7
Duzib133G1200 Durio zibethinus HOM05D003845 ORTHO05D004161 8.0e-31 141.4 541 25.0
Gohir.D07G076100 Gossypium hirsutum HOM05D003845 ORTHO05D004161 8.0e-31 141.4 538 24.9
Medtr7g406950 Medicago truncatula HOM05D003845 ORTHO05D004161 8.0e-31 141.4 540 25.0
FvH4_6g45230 Fragaria vesca HOM05D003845 ORTHO05D004161 1.8e-30 140.2 661 24.4
CBR_g31193 Chara braunii HOM05D003845 ORTHO05D004161 2.3e-30 139.8 1582 20.7
CsaV3_5G039200 Cucumis sativus L. HOM05D003845 ORTHO05D004161 3.0e-30 139.4 542 24.7
Eucgr.F02484 Eucalyptus grandis HOM05D003845 ORTHO05D004161 3.0e-30 139.4 1023 21.0
Aqoxy3G03940 Aquilegia oxysepala HOM05D003845 ORTHO05D004161 4.0e-30 139.0 1022 21.4
Sed0012635 Sechium edule HOM05D003845 ORTHO05D004161 5.2e-30 138.7 688 24.0
Atru.chr8.887 Acer truncatum HOM05D003845 ORTHO05D004161 8.8e-30 137.9 697 24.2
VMungo1383G2489 Vigna mungo HOM05D003845 ORTHO05D004161 8.8e-30 137.9 535 24.5
CDE02G0049 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 2.6e-29 136.3 594 23.4
THA.LOC104805559 Tarenaya hassleriana HOM05D003845 ORTHO05D004161 2.6e-29 136.3 622 23.3
Oeu052985.1 Olea europaea HOM05D003845 ORTHO05D004161 3.3e-29 136.0 650 24.3
CiPaw.04G040900 Carya illinoinensis HOM05D003845 ORTHO05D004161 4.4e-29 135.6 687 22.4
SMO239G0031 Selaginella moellendorffii HOM05D003845 ORTHO05D004161 5.7e-29 135.2 620 22.7
CSS0012709 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 9.7e-29 134.4 1144 22.5
Nn4g23790 Nelumbo nucifera HOM05D003845 ORTHO05D004161 1.3e-28 134.0 659 22.5
Dinv34837 Davidia involucrata HOM05D003845 ORTHO05D004161 1.7e-28 133.7 619 23.3
GSVIVG01031064001 Vitis vinifera HOM05D003845 ORTHO05D004161 1.7e-28 133.7 628 24.4
CARHR059600 Cardamine hirsuta HOM05D003845 ORTHO05D004161 4.8e-28 132.1 623 23.4
Phvul.008G004700 Phaseolus vulgaris HOM05D003845 ORTHO05D004161 4.8e-28 132.1 590 23.7
MELO3C022095.2 Cucumis melo HOM05D003845 ORTHO05D004161 6.3e-28 131.7 670 23.3
SEGI_31548 Sequoiadendron giganteum HOM05D003845 ORTHO05D004161 6.3e-28 131.7 618 22.7
RcHm_v2.0_Chr2g0162941 Rosa chinensis HOM05D003845 ORTHO05D004161 8.2e-28 131.3 665 22.9
Cc07_g08900 Coffea canephora HOM05D003845 ORTHO05D004161 1.1e-27 131.0 1108 20.8
ClCG11G005440 Citrullus lanatus HOM05D003845 ORTHO05D004161 1.4e-27 130.6 696 22.7
CANSAT64G2814 Cannabis sativa HOM05D003845 ORTHO05D004161 1.8e-27 130.2 556 23.2
FAN02G2813 Fragaria x ananassa HOM05D003845 ORTHO05D004161 1.8e-27 130.2 1605 20.2
TWI53G0876 Tripterygium wilfordii HOM05D003845 ORTHO05D004161 1.8e-27 130.2 741 22.8
Potri.004G101250 Populus trichocarpa HOM05D003845 ORTHO05D004161 3.1e-27 129.4 548 24.8
Hma1.2p1_0136F.1_g062180 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 4.1e-27 129.0 1038 21.0
Lj2C445G6 Lonicera japonica HOM05D003845 ORTHO05D004161 4.1e-27 129.0 692 22.8
Thecc.04G136100 Theobroma cacao HOM05D003845 ORTHO05D004161 1.2e-26 127.5 545 24.2
arahy.Tifrunner.gnm1.ann1.4V7WUF Arachis hypogaea HOM05D003845 ORTHO05D004161 1.6e-26 127.1 538 22.7
arahy.Tifrunner.gnm1.ann1.UJVA95 Arachis hypogaea HOM05D003845 ORTHO05D004161 1.6e-26 127.1 538 22.7
PSO063G7466 Papaver somniferum HOM05D003845 ORTHO05D004161 1.6e-26 127.1 652 22.5
Ah.10g037590 Amaranthus hybridus HOM05D003845 ORTHO05D004161 2.0e-26 126.7 591 22.5
Sopen02g030490 Solanum pennellii HOM05D003845 ORTHO05D004161 1.0e-25 124.4 685 22.9
CAN.G625.4 Capsicum annuum HOM05D003845 ORTHO05D004161 1.3e-25 124.0 660 22.4
PGR004G1392 Punica granatum HOM05D003845 ORTHO05D004161 1.3e-25 124.0 612 23.0
MD14G1001900 Malus domestica HOM05D003845 ORTHO05D004161 1.7e-25 123.6 668 22.5
Sc23g0006880 Simmondsia chinensis HOM05D003845 ORTHO05D004161 1.7e-25 123.6 1117 21.3
Manes.02G067500 Manihot esculenta HOM05D003845 ORTHO05D004161 2.9e-25 122.9 543 24.1
Solyc02g085810.3 Solanum lycopersicum HOM05D003845 ORTHO05D004161 8.5e-25 121.3 718 22.7
Zm00001eb382690 Zea mays HOM05D003845 ORTHO05D004161 4.2e-24 119.0 657 19.9
EL10Ac2g04592 Beta vulgaris HOM05D003845 ORTHO05D004161 5.5e-24 118.6 518 23.2
HPP92_003934 Vanilla planifolia HOM05D003845 ORTHO05D004161 9.4e-24 117.9 644 21.3
AUR62008978 Chenopodium quinoa HOM05D003845 ORTHO05D004161 2.7e-23 116.3 536 22.8
QL02p051715 Quercus lobata HOM05D003845 ORTHO05D004161 3.6e-23 115.9 589 22.8
MD12G1002400 Malus domestica HOM05D003845 ORTHO05D004161 8.0e-23 114.8 662 22.7
Ca_04077_v3 Cicer arietinum L. HOM05D003845 ORTHO05D004161 1.0e-22 114.4 465 22.6
SHI17842 Sapria himalayana HOM05D003845 ORTHO05D004161 1.4e-22 114.0 616 21.1
SGA_v2.0_scaffold33G13453 Striga asiatica HOM05D003845 ORTHO05D004161 1.8e-22 113.6 579 22.6
Prupe.7G002300 Prunus persica HOM05D003845 ORTHO05D004161 4.0e-22 112.5 535 23.0
AUR62014525 Chenopodium quinoa HOM05D003845 ORTHO05D004161 1.2e-21 110.9 1216 20.6
PRCOL_00002157 Prasinoderma coloniale HOM05D003845 ORTHO05D004161 4.4e-21 109.0 715 23.8
Nitab4.5_0001569g0050 Nicotiana tabacum HOM05D003845 ORTHO05D004161 1.3e-20 107.5 700 21.6
vmacro05567 Vaccinium macrocarpon HOM05D003845 ORTHO05D004161 3.7e-20 105.9 827 21.6
Peaxi162Scf00814g00242 Petunia axillaris HOM05D003845 ORTHO05D004161 2.0e-18 100.1 678 20.5
FAN14G4373 Fragaria x ananassa HOM05D003845 ORTHO05D004161 2.1e-15 90.1 753 22.4
Hma1.2p1_0136F.1_g062170 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 5.7e-13 82.0 789 20.5
Nitab4.5_0002288g0020 Nicotiana tabacum HOM05D003845 ORTHO05D004161 7.5e-13 81.6 668 21.3
Os06g0505302 Oryza sativa ssp. japonica HOM05D003845 ORTHO05D004161 9.8e-13 81.3 276 22.5
Ciclev10010942m.g Citrus clementina HOM05D003845 ORTHO05D004161 3.5e-10 72.8 329 25.2
BcaB03g15908 Brassica carinata HOM05D003845 ORTHO05D004161 3.8e-09 69.3 161 32.9
Hund16135 Selenicereus undatus HOM05D003845 ORTHO05D004161 1.9e-08 67.0 306 25.8
Lsat_1_v5_gn_5_70501 Lactuca sativa HOM05D003845 ORTHO05D004161 4.3e-08 65.9 123 33.3
Lj1g0022983 Lotus japonicus HOM05D003845 ORTHO05D004161 5.6e-08 65.5 205 25.4
FAN09G0938 Fragaria x ananassa HOM05D003845 ORTHO05D004161 4.7e-07 62.4 123 30.1
CSS0040864 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 6.1e-07 62.0 109 33.0


User provided reference genes

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