Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa024619 Carpinus fangiana HOM05D004259 ORTHO05D005014 9.5e-251 869.8 461 100.0
Cc10_g04310 Coffea canephora HOM05D004259 ORTHO05D005014 7.8e-27 125.9 335 28.4
Carub.0004s1948 Capsella rubella HOM05D004259 ORTHO05D005014 1.3e-26 125.2 350 27.7
THA.LOC104809222 Tarenaya hassleriana HOM05D004259 ORTHO05D005014 3.9e-26 123.6 351 27.4
CANSAT01G2810 Cannabis sativa HOM05D004259 ORTHO05D005014 5.0e-26 123.2 344 27.0
CARHR132030 Cardamine hirsuta HOM05D004259 ORTHO05D005014 8.6e-26 122.5 350 27.7
THA.LOC104806568 Tarenaya hassleriana HOM05D004259 ORTHO05D005014 1.1e-25 122.1 351 27.6
Thhalv10016846m.g Eutrema salsugineum HOM05D004259 ORTHO05D005014 4.3e-25 120.2 350 27.4
AL4G34050 Arabidopsis lyrata HOM05D004259 ORTHO05D005014 5.6e-25 119.8 350 28.6
AUR62039303 Chenopodium quinoa HOM05D004259 ORTHO05D005014 5.6e-25 119.8 352 27.3
Sp4g19910 Schrenkiella parvula HOM05D004259 ORTHO05D005014 5.6e-25 119.8 342 27.5
C04p10400 Brassica napus HOM05D004259 ORTHO05D005014 1.2e-24 118.6 350 26.9
BolC4t22638H Brassica oleracea HOM05D004259 ORTHO05D005014 1.2e-24 118.6 350 26.9
A05p08400 Brassica napus HOM05D004259 ORTHO05D005014 2.1e-24 117.9 350 27.4
BraA05t19805Z Brassica rapa HOM05D004259 ORTHO05D005014 2.1e-24 117.9 350 27.1
AUR62022427 Chenopodium quinoa HOM05D004259 ORTHO05D005014 2.1e-24 117.9 352 27.0
Os03g0184700 Oryza sativa ssp. japonica HOM05D004259 ORTHO05D005014 3.6e-24 117.1 333 25.2
Aqoxy7G01016 Aquilegia oxysepala HOM05D004259 ORTHO05D005014 8.1e-24 115.9 339 26.5
BcaB02g09273 Brassica carinata HOM05D004259 ORTHO05D005014 8.1e-24 115.9 342 26.0
MD08G1103300 Malus domestica HOM05D004259 ORTHO05D005014 8.1e-24 115.9 342 26.9
AT2G37560 Arabidopsis thaliana HOM05D004259 ORTHO05D005014 1.1e-23 115.5 340 27.1
arahy.Tifrunner.gnm1.ann1.1PWX74 Arachis hypogaea HOM05D004259 ORTHO05D005014 1.1e-23 115.5 335 27.2
arahy.Tifrunner.gnm1.ann1.63NC9C Arachis hypogaea HOM05D004259 ORTHO05D005014 1.1e-23 115.5 335 27.2
MELO3C010882.2 Cucumis melo HOM05D004259 ORTHO05D005014 1.1e-23 115.5 349 26.4
Eucgr.F00239 Eucalyptus grandis HOM05D004259 ORTHO05D005014 1.1e-23 115.5 343 26.2
FAN15G2861 Fragaria x ananassa HOM05D001625 ORTHO05D005014 1.1e-23 115.5 351 26.2
EL10Ac3g06655 Beta vulgaris HOM05D004259 ORTHO05D005014 1.4e-23 115.2 351 26.2
PSO541G1765 Papaver somniferum HOM05D004259 ORTHO05D005014 1.4e-23 115.2 345 26.4
BcaC02g11869 Brassica carinata HOM05D004259 ORTHO05D005014 2.3e-23 114.4 349 27.8
CsaV3_2G028020 Cucumis sativus L. HOM05D004259 ORTHO05D005014 2.3e-23 114.4 349 26.4
TAR376G0692 Trochodendron aralioides HOM05D004259 ORTHO05D005014 3.1e-23 114.0 352 25.3
Zm00001eb248940 Zea mays HOM05D004259 ORTHO05D005014 3.1e-23 114.0 335 26.0
AagrBONN_evm.TU.Sc2ySwM_344.5209 Anthoceros agrestis HOM05D004259 ORTHO05D005014 4.0e-23 113.6 339 24.5
CSS0003524 Camellia sinensis var. sinensis HOM05D004259 ORTHO05D005014 5.2e-23 113.2 352 26.1
SMO147G0302 Selaginella moellendorffii HOM05D004259 ORTHO05D005014 5.2e-23 113.2 326 25.8
TWI53G0519 Tripterygium wilfordii HOM05D004259 ORTHO05D005014 6.8e-23 112.8 336 28.9
FvH4_2g34610 Fragaria vesca HOM05D004259 ORTHO05D005014 8.9e-23 112.5 351 25.9
Cpa.g.sc973.4 Carica papaya HOM05D004259 ORTHO05D005014 1.2e-22 112.1 343 25.7
PSO675G0522 Papaver somniferum HOM05D004259 ORTHO05D005014 1.2e-22 112.1 345 25.8
PSO339G6255 Papaver somniferum HOM05D004259 ORTHO05D005014 1.5e-22 111.7 345 25.5
FAN20G1942 Fragaria x ananassa HOM05D004259 ORTHO05D005014 2.0e-22 111.3 351 25.9
Sed0023883 Sechium edule HOM05D004259 ORTHO05D005014 2.0e-22 111.3 351 25.9
Nn1g05830 Nelumbo nucifera HOM05D004259 ORTHO05D005014 2.6e-22 110.9 352 24.7
Atru.chr8.1940 Acer truncatum HOM05D004259 ORTHO05D005014 5.8e-22 109.8 342 25.4
Potri.003G094800 Populus trichocarpa HOM05D004259 ORTHO05D005014 5.8e-22 109.8 343 24.5
PGSC0003DMG400027003 Solanum tuberosum HOM05D004259 ORTHO05D005014 5.8e-22 109.8 341 23.8
MCO16G222 Micromonas commoda HOM05D004259 ORTHO05D005014 7.5e-22 109.4 310 25.8
Sopen06g029870 Solanum pennellii HOM05D004259 ORTHO05D005014 9.9e-22 109.0 341 23.8
Migut.N02703 Erythranthe guttata HOM05D004259 ORTHO05D005014 1.3e-21 108.6 343 24.8
RcHm_v2.0_Chr6g0307691 Rosa chinensis HOM05D004259 ORTHO05D005014 1.7e-21 108.2 351 25.6
Solyc06g073510.3 Solanum lycopersicum HOM05D004259 ORTHO05D005014 1.7e-21 108.2 341 23.8
Sabra03G0064000 Salix brachista HOM05D004259 ORTHO05D005014 2.9e-21 107.5 324 25.3
Haze_17552 Corylus avellana HOM05D004259 ORTHO05D005014 3.7e-21 107.1 334 26.3
PGR031G2227 Punica granatum HOM05D004259 ORTHO05D005014 3.7e-21 107.1 354 25.7
Sabra11G0061200 Salix brachista HOM05D004259 ORTHO05D005014 4.9e-21 106.7 325 25.2
Thecc.05G042500 Theobroma cacao HOM05D004259 ORTHO05D005014 4.9e-21 106.7 352 25.3
Peaxi162Scf00162g00029 Petunia axillaris HOM05D004259 ORTHO05D005014 6.4e-21 106.3 360 24.2
CAN.G65.190 Capsicum annuum HOM05D004259 ORTHO05D005014 1.1e-20 105.5 362 24.3
CiPaw.15G061500 Carya illinoinensis HOM05D004259 ORTHO05D005014 1.1e-20 105.5 350 24.9
Manes.08G078200 Manihot esculenta HOM05D004259 ORTHO05D005014 1.1e-20 105.5 351 26.2
Dinv39327 Davidia involucrata HOM05D004259 ORTHO05D005014 1.4e-20 105.1 325 25.8
Duzib128G0657 Durio zibethinus HOM05D004259 ORTHO05D005014 1.4e-20 105.1 351 24.8
Ah.05g168820 Amaranthus hybridus HOM05D001625 ORTHO05D005014 1.9e-20 104.8 252 30.6
Cfa018528 Carpinus fangiana HOM05D004259 ORTHO05D005014 1.9e-20 104.8 351 25.6
Gohir.D11G345100 Gossypium hirsutum HOM05D004259 ORTHO05D005014 2.4e-20 104.4 351 23.9
Gorai.007G375500 Gossypium raimondii HOM05D004259 ORTHO05D005014 2.4e-20 104.4 351 23.9
Nitab4.5_0002045g0130 Nicotiana tabacum HOM05D004259 ORTHO05D005014 2.4e-20 104.4 353 23.5
ClCG08G015740 Citrullus lanatus HOM05D004259 ORTHO05D005014 4.1e-20 103.6 361 25.5
Lj3C736T6 Lonicera japonica HOM05D004259 ORTHO05D005014 4.1e-20 103.6 331 26.3
ATR0100G023 Amborella trichopoda HOM05D004259 ORTHO05D005014 5.4e-20 103.2 330 24.2
Gohir.A11G326200 Gossypium hirsutum HOM05D004259 ORTHO05D005014 5.4e-20 103.2 351 24.2
HanXRQChr04g0103531 Helianthus annuus HOM05D004259 ORTHO05D005014 5.4e-20 103.2 351 24.8
Peaxi162Scf00929g00211 Petunia axillaris HOM05D004259 ORTHO05D005014 5.4e-20 103.2 360 23.6
Psat6g012600 Pisum sativum HOM05D004259 ORTHO05D005014 5.4e-20 103.2 333 23.7
CBR_g6665 Chara braunii HOM05D004259 ORTHO05D005014 7.1e-20 102.8 336 25.3
Ciclev10012027m.g Citrus clementina HOM05D004259 ORTHO05D005014 7.1e-20 102.8 342 25.1
Lj5g0003666 Lotus japonicus HOM05D004259 ORTHO05D005014 7.1e-20 102.8 341 24.6
Mapoly0106s0035 Marchantia polymorpha HOM05D004259 ORTHO05D005014 7.1e-20 102.8 310 23.9
MSTRG.24327 Avicennia marina HOM05D004259 ORTHO05D005014 9.2e-20 102.4 343 24.5
Cre03.g199400 Chlamydomonas reinhardtii HOM05D004259 ORTHO05D005014 9.2e-20 102.4 318 27.4
MBI02_g17334_MAGBIO Magnolia biondii HOM05D004259 ORTHO05D005014 9.2e-20 102.4 379 24.5
Ca_01811_v3 Cicer arietinum L. HOM05D004259 ORTHO05D005014 1.2e-19 102.1 336 25.0
Ca_29610_v3 Cicer arietinum L. HOM05D004259 ORTHO05D005014 1.2e-19 102.1 336 25.0
Lalb_Chr19g0129351 Lupinus albus HOM05D004259 ORTHO05D005014 1.2e-19 102.1 350 23.7
ECA247G2793 Erigeron canadensis HOM05D004259 ORTHO05D005014 1.6e-19 101.7 308 24.4
TPR.G17553 Trifolium pratense HOM05D004259 ORTHO05D005014 1.6e-19 101.7 334 23.4
Lsat_1_v5_gn_1_20280 Lactuca sativa HOM05D004259 ORTHO05D005014 2.1e-19 101.3 348 23.6
Medtr1g019770 Medicago truncatula HOM05D004259 ORTHO05D005014 3.5e-19 100.5 336 24.4
VMungo0647G0522 Vigna mungo HOM05D004259 ORTHO05D005014 3.5e-19 100.5 337 24.6
Sc07g0003460 Simmondsia chinensis HOM05D004259 ORTHO05D005014 7.8e-19 99.4 239 31.0
Oeu018211.1 Olea europaea HOM05D004259 ORTHO05D005014 1.0e-18 99.0 363 24.2
unitig_26.g10027 Utricularia gibba HOM05D004259 ORTHO05D005014 1.0e-18 99.0 343 25.9
Phvul.001G021100 Phaseolus vulgaris HOM05D004259 ORTHO05D005014 1.3e-18 98.6 339 24.5
CSS0037728 Camellia sinensis var. sinensis HOM05D004259 ORTHO05D005014 2.3e-18 97.8 315 26.0
SEGI_21568 Sequoiadendron giganteum HOM05D004259 ORTHO05D005014 3.0e-18 97.4 289 26.6
Prupe.1G438300 Prunus persica HOM05D004259 ORTHO05D005014 5.1e-18 96.7 227 29.5
CDE10G1325 Ceratophyllum demersum HOM05D004259 ORTHO05D005014 6.6e-18 96.3 331 25.7
FAN27G2417 Fragaria x ananassa HOM05D004259 ORTHO05D005014 1.1e-17 95.5 341 25.8
Glyma.14G082100 Glycine max HOM05D004259 ORTHO05D005014 1.5e-17 95.1 340 23.5
GSVIVG01009522001 Vitis vinifera HOM05D004259 ORTHO05D005014 3.3e-17 94.0 237 29.1
Hma1.2p1_0718F.1_g208420 Hydrangea macrophylla HOM05D004259 ORTHO05D005014 7.3e-17 92.8 226 30.5
Nitab4.5_0002664g0020 Nicotiana tabacum HOM05D004259 ORTHO05D005014 1.6e-16 91.7 386 21.5
MD15G1084600 Malus domestica HOM05D004259 ORTHO05D005014 4.7e-16 90.1 290 26.6
QL02p005360 Quercus lobata HOM05D004259 ORTHO05D005014 4.7e-16 90.1 288 25.7
Rhsim07G0229700 Rhododendron simsii HOM05D004259 ORTHO05D005014 1.1e-15 89.0 305 24.9
Haze_17543 Corylus avellana HOM05D004259 ORTHO05D005014 1.8e-15 88.2 238 28.6
Pp3c18_14740 Physcomitrium patens HOM05D004259 ORTHO05D005014 1.8e-15 88.2 352 23.3
Rhsim10G0028600 Rhododendron simsii HOM05D004259 ORTHO05D005014 2.4e-15 87.8 335 24.8
Glyma.17G243200 Glycine max HOM05D004259 ORTHO05D005014 3.1e-15 87.4 298 22.8
SalBow3G4106 Salvia bowleyana HOM05D004259 ORTHO05D005014 4.0e-15 87.0 320 24.7
SGA_v2.0_scaffold204G41641 Striga asiatica HOM05D004259 ORTHO05D005014 1.5e-14 85.1 236 29.2
SalBow2G2012 Salvia bowleyana HOM05D004259 ORTHO05D005014 7.6e-14 82.8 364 22.0
SalBow2G2463 Salvia bowleyana HOM05D004259 ORTHO05D005014 9.9e-14 82.4 364 22.0
SalBow2G1152 Salvia bowleyana HOM05D004259 ORTHO05D005014 1.3e-13 82.0 364 21.7
Nitab4.5_0000111g0020 Nicotiana tabacum HOM05D004259 ORTHO05D005014 4.9e-13 80.1 371 21.0
TWI53G0792 Tripterygium wilfordii HOM05D004259 ORTHO05D005014 6.4e-13 79.7 224 27.7
PRCOL_00004897 Prasinoderma coloniale HOM05D004259 ORTHO05D005014 1.1e-12 79.0 326 22.4
vmacro04457 Vaccinium macrocarpon HOM05D004259 ORTHO05D005014 1.1e-12 79.0 323 23.8
SalBow2G0695 Salvia bowleyana HOM05D004259 ORTHO05D005014 1.2e-11 75.5 226 26.1
SalBow2G2610 Salvia bowleyana HOM05D004259 ORTHO05D005014 4.6e-11 73.6 336 22.3
Nitab4.5_0004918g0050 Nicotiana tabacum HOM05D004259 ORTHO05D005014 1.0e-10 72.4 347 19.9
SHI12655 Sapria himalayana HOM05D004259 ORTHO05D005014 2.3e-10 71.2 335 25.1
Actinidia29866 Actinidia chinensis HOM05D004259 ORTHO05D005014 1.1e-09 68.9 184 26.6
Peaxi162Scf00003g02311 Petunia axillaris HOM05D004259 ORTHO05D005014 1.9e-09 68.2 377 20.7
HPP92_027220 Vanilla planifolia HOM05D004259 ORTHO05D005014 1.6e-08 65.1 131 34.4
Rhsim10G0028100 Rhododendron simsii HOM05D004259 ORTHO05D005014 8.1e-08 62.8 323 22.6


User provided reference genes

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