Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa024540 Carpinus fangiana HOM05D005903 ORTHO05D007293 5.0e-304 1047.0 527 100.0
ECA247G0018 Erigeron canadensis HOM05D005903 ORTHO05D007293 5.6e-45 186.4 315 37.8
Thecc.02G003100 Theobroma cacao HOM05D005903 ORTHO05D007293 4.7e-44 183.3 315 37.1
Lsat_1_v5_gn_1_24420 Lactuca sativa HOM05D005903 ORTHO05D007293 8.0e-44 182.6 318 37.1
CiPaw.09G138500 Carya illinoinensis HOM05D005903 ORTHO05D007293 1.0e-43 182.2 361 34.1
Dinv07001 Davidia involucrata HOM05D005903 ORTHO05D007293 1.0e-43 182.2 313 38.0
Mapoly0019s0171 Marchantia polymorpha HOM05D005903 ORTHO05D007293 1.4e-43 181.8 358 33.0
Hma1.2p1_0088F.1_g045276 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 1.8e-43 181.4 377 33.2
SEGI_28167 Sequoiadendron giganteum HOM05D005903 ORTHO05D007293 4.0e-43 180.3 274 39.1
Ciclev10016117m.g Citrus clementina HOM05D005903 ORTHO05D007293 8.9e-43 179.1 318 36.2
Lj4g0014401 Lotus japonicus HOM05D005903 ORTHO05D007293 2.6e-42 177.6 365 33.4
TAR624G0428 Trochodendron aralioides HOM05D005903 ORTHO05D007293 2.6e-42 177.6 361 34.3
QL11p012010 Quercus lobata HOM05D005903 ORTHO05D007293 3.4e-42 177.2 361 33.8
CANSAT35G1866 Cannabis sativa HOM05D005903 ORTHO05D007293 7.5e-42 176.0 322 35.4
Manes.03G070940 Manihot esculenta HOM05D005903 ORTHO05D007293 7.5e-42 176.0 316 37.3
Eucgr.A00192 Eucalyptus grandis HOM05D005903 ORTHO05D007293 9.8e-42 175.6 361 33.2
GSVIVG01012154001 Vitis vinifera HOM05D005903 ORTHO05D007293 9.8e-42 175.6 376 33.8
DCAR_003756 Daucus carota HOM05D005903 ORTHO05D007293 1.3e-41 175.3 270 39.6
Gorai.007G055300 Gossypium raimondii HOM05D005903 ORTHO05D007293 1.3e-41 175.3 327 35.5
HanXRQChr12g0369311 Helianthus annuus HOM05D005903 ORTHO05D007293 1.3e-41 175.3 323 36.2
Dinv26323 Davidia involucrata HOM05D005903 ORTHO05D007293 1.7e-41 174.9 225 44.0
Cc09_g05110 Coffea canephora HOM05D005903 ORTHO05D007293 2.2e-41 174.5 319 36.7
Gohir.D11G050900 Gossypium hirsutum HOM05D005903 ORTHO05D007293 2.2e-41 174.5 315 35.9
ATR0605G282 Amborella trichopoda HOM05D005903 ORTHO05D007293 2.9e-41 174.1 318 35.2
Potri.001G076200 Populus trichocarpa HOM05D005903 ORTHO05D007293 2.9e-41 174.1 361 32.4
Gohir.A11G047300 Gossypium hirsutum HOM05D005903 ORTHO05D007293 3.7e-41 173.7 315 35.6
RcHm_v2.0_Chr5g0021241 Rosa chinensis HOM05D005903 ORTHO05D007293 3.7e-41 173.7 360 33.1
BcaC07g40489 Brassica carinata HOM05D005903 ORTHO05D007293 4.9e-41 173.3 315 34.6
Atru.chr10.296 Acer truncatum HOM05D005903 ORTHO05D007293 6.4e-41 172.9 364 32.1
C08p34580 Brassica napus HOM05D005903 ORTHO05D007293 6.4e-41 172.9 315 34.3
BolC8t51059H Brassica oleracea HOM05D005903 ORTHO05D007293 6.4e-41 172.9 315 34.3
Cc00_g27340 Coffea canephora HOM05D005903 ORTHO05D007293 6.4e-41 172.9 319 37.3
FAN21G0687 Fragaria x ananassa HOM05D005903 ORTHO05D007293 8.3e-41 172.6 360 32.8
AL5G26920 Arabidopsis lyrata HOM05D005903 ORTHO05D007293 1.1e-40 172.2 315 35.2
Medtr4g094760 Medicago truncatula HOM05D005903 ORTHO05D007293 1.1e-40 172.2 371 32.6
PGR044G2521 Punica granatum HOM05D005903 ORTHO05D007293 1.1e-40 172.2 364 33.8
Migut.M02015 Erythranthe guttata HOM05D005903 ORTHO05D007293 1.4e-40 171.8 366 32.5
FvH4_3g13050 Fragaria vesca HOM05D005903 ORTHO05D007293 1.4e-40 171.8 360 33.1
FAN11G1857 Fragaria x ananassa HOM05D005903 ORTHO05D007293 1.4e-40 171.8 360 33.1
MD05G1245400 Malus domestica HOM05D005903 ORTHO05D007293 1.8e-40 171.4 377 32.1
THA.LOC104812245 Tarenaya hassleriana HOM05D005903 ORTHO05D007293 2.4e-40 171.0 399 30.3
ClCG01G025750 Citrullus lanatus HOM05D005903 ORTHO05D007293 3.2e-40 170.6 179 49.7
Pp3c7_4190 Physcomitrium patens HOM05D005903 ORTHO05D007293 3.2e-40 170.6 365 33.4
FAN16G3015 Fragaria x ananassa HOM05D005903 ORTHO05D007293 4.1e-40 170.2 360 32.8
BcaC01g01793 Brassica carinata HOM05D005903 ORTHO05D007293 7.0e-40 169.5 315 34.0
C03p71840 Brassica napus HOM05D005903 ORTHO05D007293 7.0e-40 169.5 315 34.0
Nitab4.5_0010610g0030 Nicotiana tabacum HOM05D005903 ORTHO05D007293 7.0e-40 169.5 367 32.2
BolC3t19474H Brassica oleracea HOM05D005903 ORTHO05D007293 9.2e-40 169.1 315 34.0
Nn7g38356 Nelumbo nucifera HOM05D005903 ORTHO05D007293 9.2e-40 169.1 316 36.1
PGSC0003DMG400007316 Solanum tuberosum HOM05D005903 ORTHO05D007293 9.2e-40 169.1 367 31.3
BraA06t25085Z Brassica rapa HOM05D005903 ORTHO05D007293 1.2e-39 168.7 315 33.7
SMO367G0859 Selaginella moellendorffii HOM05D005903 ORTHO05D007293 1.2e-39 168.7 378 33.3
Solyc02g081840.4 Solanum lycopersicum HOM05D005903 ORTHO05D007293 1.2e-39 168.7 367 31.3
BcaB01g00896 Brassica carinata HOM05D005903 ORTHO05D007293 1.6e-39 168.3 315 34.9
Carub.0005s1376 Capsella rubella HOM05D005903 ORTHO05D007293 1.6e-39 168.3 318 34.3
CsaV3_6G052990 Cucumis sativus L. HOM05D005903 ORTHO05D007293 1.6e-39 168.3 179 48.6
FAN25G2454 Fragaria x ananassa HOM05D005903 ORTHO05D007293 1.6e-39 168.3 360 32.5
Sp1g31680 Schrenkiella parvula HOM05D005903 ORTHO05D007293 1.6e-39 168.3 315 33.7
THA.LOC104824626 Tarenaya hassleriana HOM05D005903 ORTHO05D007293 1.6e-39 168.3 400 29.5
AT3G47630 Arabidopsis thaliana HOM05D005903 ORTHO05D007293 2.0e-39 167.9 315 34.3
Ca_18231_v3 Cicer arietinum L. HOM05D005903 ORTHO05D007293 2.0e-39 167.9 278 36.3
MELO3C007010.2 Cucumis melo HOM05D005903 ORTHO05D007293 2.0e-39 167.9 317 36.9
Psat7g087640 Pisum sativum HOM05D005903 ORTHO05D007293 2.0e-39 167.9 239 40.6
BraA09t40620Z Brassica rapa HOM05D005903 ORTHO05D007293 2.7e-39 167.5 315 33.7
TPR.G23817 Trifolium pratense HOM05D005903 ORTHO05D007293 2.7e-39 167.5 317 34.4
CAN.G809.52 Capsicum annuum HOM05D005903 ORTHO05D007293 3.5e-39 167.2 376 32.2
Thhalv10011094m.g Eutrema salsugineum HOM05D005903 ORTHO05D007293 3.5e-39 167.2 315 34.3
Prupe.7G025500 Prunus persica HOM05D005903 ORTHO05D007293 3.5e-39 167.2 222 42.3
Sed0025041 Sechium edule HOM05D005903 ORTHO05D007293 3.5e-39 167.2 176 50.0
vmacro03560 Vaccinium macrocarpon HOM05D005903 ORTHO05D007293 4.6e-39 166.8 332 34.6
VMungo0251G1440 Vigna mungo HOM05D005903 ORTHO05D007293 4.6e-39 166.8 383 32.1
CARHR156310 Cardamine hirsuta HOM05D005903 ORTHO05D007293 5.9e-39 166.4 318 34.0
Nitab4.5_0000844g0290 Nicotiana tabacum HOM05D005903 ORTHO05D007293 5.9e-39 166.4 361 31.9
AagrBONN_evm.TU.Sc2ySwM_344.2832 Anthoceros agrestis HOM05D005903 ORTHO05D007293 7.8e-39 166.0 271 36.9
A06p19990 Brassica napus HOM05D005903 ORTHO05D007293 7.8e-39 166.0 315 33.3
CSS0034787 Camellia sinensis var. sinensis HOM05D005903 ORTHO05D007293 7.8e-39 166.0 307 34.5
Migut.G01043 Erythranthe guttata HOM05D005903 ORTHO05D007293 1.0e-38 165.6 366 32.5
Glyma.05G134300 Glycine max HOM05D005903 ORTHO05D007293 2.3e-38 164.5 377 30.5
Os11g0549650 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 3.9e-38 163.7 230 40.4
SGA_v2.0_scaffold31G12765 Striga asiatica HOM05D005903 ORTHO05D007293 5.0e-38 163.3 335 33.1
A09p51850 Brassica napus HOM05D005903 ORTHO05D007293 6.6e-38 162.9 315 32.7
Glyma.08G089000 Glycine max HOM05D005903 ORTHO05D007293 6.6e-38 162.9 381 31.8
Zm00001eb201720 Zea mays HOM05D005903 ORTHO05D007293 6.6e-38 162.9 179 45.3
Cpa.g.sc30.99 Carica papaya HOM05D005903 ORTHO05D007293 8.6e-38 162.5 320 34.7
PSO675G2427 Papaver somniferum HOM05D005903 ORTHO05D007293 2.5e-37 161.0 319 34.5
COL.COLO4_05791 Corchorus olitorius HOM05D005903 ORTHO05D007293 9.5e-37 159.1 156 51.9
Hund09980 Selenicereus undatus HOM05D005903 ORTHO05D007293 9.5e-37 159.1 179 47.5
Aa31LG9G16250 Aethionema arabicum HOM05D005903 ORTHO05D007293 1.2e-36 158.7 315 32.7
EL10Ac5g11217 Beta vulgaris HOM05D005903 ORTHO05D007293 1.6e-36 158.3 321 33.3
AUR62036920 Chenopodium quinoa HOM05D005903 ORTHO05D007293 1.6e-36 158.3 321 33.3
Aqoxy7G00859 Aquilegia oxysepala HOM05D005903 ORTHO05D007293 3.6e-36 157.1 226 41.2
HPP92_021274 Vanilla planifolia HOM05D005903 ORTHO05D007293 1.0e-35 155.6 220 37.7
Dinv01020 Davidia involucrata HOM05D005903 ORTHO05D007293 1.8e-35 154.8 153 51.6
Sabra01G0053000 Salix brachista HOM05D005903 ORTHO05D007293 3.1e-35 154.1 317 34.1
Lj1C1150G3 Lonicera japonica HOM05D005903 ORTHO05D007293 1.2e-34 152.1 317 33.1
arahy.Tifrunner.gnm1.ann1.7A7AL1 Arachis hypogaea HOM05D005903 ORTHO05D007293 2.0e-34 151.4 359 30.6
Duzib052G0373 Durio zibethinus HOM05D005903 ORTHO05D007293 2.6e-34 151.0 334 33.5
Hma1.2p1_0088F.1_g045273 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 7.5e-34 149.4 384 30.5
Lalb_Chr07g0188231 Lupinus albus HOM05D005903 ORTHO05D007293 9.8e-34 149.1 217 41.5
AUR62032162 Chenopodium quinoa HOM05D005903 ORTHO05D007293 1.3e-33 148.7 303 35.0
Hma1.2p1_1011F.1_g247520 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 1.3e-33 148.7 384 30.5
Sopen02g026460 Solanum pennellii HOM05D005903 ORTHO05D007293 3.7e-33 147.1 280 33.9
MCO11G061 Micromonas commoda HOM05D005903 ORTHO05D007293 1.9e-32 144.8 244 34.8
Rhsim13G0219000 Rhododendron simsii HOM05D005903 ORTHO05D007293 1.9e-32 144.8 314 31.8
Phvul.002G188100 Phaseolus vulgaris HOM05D005903 ORTHO05D007293 4.1e-32 143.7 192 40.1
Rhsim07G0106900 Rhododendron simsii HOM05D005903 ORTHO05D007293 4.6e-31 140.2 282 33.3
Cre10.g436900 Chlamydomonas reinhardtii HOM05D005903 ORTHO05D007293 3.9e-30 137.1 177 38.4
CBR_g23454 Chara braunii HOM05D001496 ORTHO05D007453 2.5e-29 134.4 172 42.4
Rhsim05G0003000 Rhododendron simsii HOM05D005903 ORTHO05D007293 5.6e-29 133.3 281 32.7
Prupe.4G118500 Prunus persica HOM05D005903 ORTHO05D007293 1.1e-27 129.0 271 33.9
PSO675G2002 Papaver somniferum HOM05D005903 ORTHO05D007293 4.4e-26 123.6 364 27.5
TWI63G1157 Tripterygium wilfordii HOM05D005903 ORTHO05D007293 1.7e-25 121.7 316 30.7
CDE06G1059 Ceratophyllum demersum HOM05D005903 ORTHO05D007293 2.9e-25 120.9 325 30.2
PRCOL_00001260 Prasinoderma coloniale HOM05D005903 ORTHO05D007293 6.4e-25 119.8 252 30.6
Haze_05254 Corylus avellana HOM05D005903 ORTHO05D007293 9.2e-24 115.9 256 33.6
Peaxi162Scf00036g02217 Petunia axillaris HOM05D005903 ORTHO05D007293 1.6e-23 115.2 313 30.7
Os11g0549690 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 3.5e-23 114.0 125 44.8
arahy.Tifrunner.gnm1.ann1.STP4KF Arachis hypogaea HOM05D005903 ORTHO05D007293 3.3e-21 107.5 353 25.2
Oeu056062.1 Olea europaea HOM05D005903 ORTHO05D007293 5.6e-21 106.7 126 42.9
Gohir.D11G050975 Gossypium hirsutum HOM05D005903 ORTHO05D007293 9.5e-21 105.9 171 38.6
Sc04g0004120 Simmondsia chinensis HOM05D005903 ORTHO05D007293 2.8e-12 77.8 131 31.3
Migut.O00470 Erythranthe guttata HOM05D005903 ORTHO05D007293 1.8e-11 75.1 143 36.4
Haze_05249 Corylus avellana HOM05D005903 ORTHO05D007293 1.2e-07 62.4 63 54.0
CBR_g8146 Chara braunii HOM05D005903 ORTHO05D000048 1.6e-07 62.0 66 47.0
Sc04g0004130 Simmondsia chinensis HOM05D005903 ORTHO05D007293 3.0e-06 57.8 103 36.9


User provided reference genes

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