Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa024505 Carpinus fangiana HOM05D005053 ORTHO05D124968 9.6e-167 590.1 303 100.0
unitig_736.g22369 Utricularia gibba HOM05D005053 ORTHO05D006206 1.4e-13 81.3 215 27.0
ATR0225G009 Amborella trichopoda HOM05D005053 ORTHO05D006206 9.4e-13 78.6 205 26.3
Lsat_1_v5_gn_2_86920 Lactuca sativa HOM05D005053 ORTHO05D006206 1.2e-12 78.2 206 27.2
EL10Ac6g15144 Beta vulgaris HOM05D005053 ORTHO05D006206 6.1e-12 75.9 203 28.1
HanXRQChr07g0199901 Helianthus annuus HOM05D005053 ORTHO05D006206 6.1e-12 75.9 206 26.2
Migut.H00475 Erythranthe guttata HOM05D005053 ORTHO05D006206 7.9e-12 75.5 203 26.6
vmacro17912 Vaccinium macrocarpon HOM05D005053 ORTHO05D006206 1.0e-11 75.1 205 25.4
HPP92_024294 Vanilla planifolia HOM05D005053 ORTHO05D006206 1.0e-11 75.1 202 25.7
HPP92_024303 Vanilla planifolia HOM05D005053 ORTHO05D006206 1.0e-11 75.1 202 25.7
HanXRQChr14g0448331 Helianthus annuus HOM05D005053 ORTHO05D006206 1.4e-11 74.7 206 26.2
AUR62003832 Chenopodium quinoa HOM05D005053 ORTHO05D006206 2.3e-11 73.9 203 27.1
AUR62001971 Chenopodium quinoa HOM05D005053 ORTHO05D006206 3.0e-11 73.6 203 26.6
ECA238G1636 Erigeron canadensis HOM05D005053 ORTHO05D006206 3.0e-11 73.6 206 26.2
CSS0024932 Camellia sinensis var. sinensis HOM05D005053 ORTHO05D006206 3.9e-11 73.2 206 26.7
Medtr8g079240 Medicago truncatula HOM05D005053 ORTHO05D006206 3.9e-11 73.2 207 25.1
VMungo0251G0766 Vigna mungo HOM05D005053 ORTHO05D006206 3.9e-11 73.2 203 25.6
arahy.Tifrunner.gnm1.ann1.IMYE37 Arachis hypogaea HOM05D005053 ORTHO05D006206 5.1e-11 72.8 207 26.1
arahy.Tifrunner.gnm1.ann1.VE46QQ Arachis hypogaea HOM05D005053 ORTHO05D006206 5.1e-11 72.8 207 26.1
Hma1.2p1_0687F.1_g203520 Hydrangea macrophylla HOM05D005053 ORTHO05D006206 5.1e-11 72.8 205 24.9
TAR376G0500 Trochodendron aralioides HOM05D005053 ORTHO05D006206 5.1e-11 72.8 208 25.5
Actinidia12070 Actinidia chinensis HOM05D005053 ORTHO05D006206 6.7e-11 72.4 216 25.5
FAN28G1734 Fragaria x ananassa HOM05D005053 ORTHO05D006206 8.8e-11 72.0 205 25.4
Glyma.17G180900 Glycine max HOM05D005053 ORTHO05D006206 8.8e-11 72.0 204 26.0
Cpa.g.sc6.408 Carica papaya HOM05D005053 ORTHO05D006206 1.1e-10 71.6 205 26.3
RcHm_v2.0_Chr2g0104011 Rosa chinensis HOM05D005053 ORTHO05D006206 1.1e-10 71.6 205 25.9
Aqoxy6G00906 Aquilegia oxysepala HOM05D005053 ORTHO05D006206 1.5e-10 71.2 205 25.9
PGR102G2816 Punica granatum HOM05D005053 ORTHO05D006206 2.0e-10 70.9 204 27.5
Cc07_g05640 Coffea canephora HOM05D005053 ORTHO05D006206 2.6e-10 70.5 206 26.7
FvH4_1g14960 Fragaria vesca HOM05D005053 ORTHO05D006206 2.6e-10 70.5 205 25.9
Phvul.003G248000 Phaseolus vulgaris HOM05D005053 ORTHO05D006206 2.6e-10 70.5 205 25.4
Hund13583 Selenicereus undatus HOM05D005053 ORTHO05D006206 2.6e-10 70.5 204 27.5
Oeu004887.1 Olea europaea HOM05D005053 ORTHO05D006206 3.3e-10 70.1 213 25.8
Sabra07G0034100 Salix brachista HOM05D005053 ORTHO05D006206 3.3e-10 70.1 204 26.0
Dinv29944 Davidia involucrata HOM05D005053 ORTHO05D006206 4.4e-10 69.7 208 26.9
Haze_15460 Corylus avellana HOM05D005053 ORTHO05D006206 5.7e-10 69.3 205 24.9
FAN26G1713 Fragaria x ananassa HOM05D005053 ORTHO05D006206 5.7e-10 69.3 205 25.4
Lalb_Chr09g0333681 Lupinus albus HOM05D005053 ORTHO05D006206 5.7e-10 69.3 204 25.5
MD02G1163200 Malus domestica HOM05D005053 ORTHO05D006206 5.7e-10 69.3 206 25.2
BcaB04g20086 Brassica carinata HOM05D005053 ORTHO05D006206 7.4e-10 68.9 189 23.8
CAN.G470.7 Capsicum annuum HOM05D005053 ORTHO05D006206 7.4e-10 68.9 205 23.9
ClCG01G016600 Citrullus lanatus HOM05D005053 ORTHO05D006206 7.4e-10 68.9 205 24.4
FAN23G1215 Fragaria x ananassa HOM05D005053 ORTHO05D006206 7.4e-10 68.9 205 25.4
Os12g0446700 Oryza sativa ssp. japonica HOM05D005053 ORTHO05D006206 7.4e-10 68.9 186 25.8
Aa31LG1G15480 Aethionema arabicum HOM05D005053 ORTHO05D006206 9.7e-10 68.6 186 24.7
Ca_22210_v3 Cicer arietinum L. HOM05D005053 ORTHO05D006206 9.7e-10 68.6 204 25.0
Ca_22228_v3 Cicer arietinum L. HOM05D005053 ORTHO05D006206 9.7e-10 68.6 204 25.0
PSO675G4006 Papaver somniferum HOM05D005053 ORTHO05D006206 9.7e-10 68.6 204 24.0
MELO3C007534.2 Cucumis melo HOM05D005053 ORTHO05D006206 1.3e-09 68.2 205 23.9
CsaV3_6G042980 Cucumis sativus L. HOM05D005053 ORTHO05D006206 1.3e-09 68.2 205 23.9
Lj4g0026236 Lotus japonicus HOM05D005053 ORTHO05D006206 1.3e-09 68.2 204 25.0
PSO541G4895 Papaver somniferum HOM05D005053 ORTHO05D006206 1.3e-09 68.2 204 24.0
THA.LOC104819229 Tarenaya hassleriana HOM05D005053 ORTHO05D006206 1.3e-09 68.2 204 24.0
AagrBONN_evm.TU.Sc2ySwM_344.1821 Anthoceros agrestis HOM05D005053 ORTHO05D006206 1.7e-09 67.8 182 29.7
Cfa003962 Carpinus fangiana HOM05D005053 ORTHO05D006206 1.7e-09 67.8 223 24.2
FAN19G0163 Fragaria x ananassa HOM05D005053 ORTHO05D006206 1.7e-09 67.8 205 25.4
MSTRG.15402 Avicennia marina HOM05D005053 ORTHO05D006206 2.2e-09 67.4 221 24.0
Sed0021889 Sechium edule HOM05D005053 ORTHO05D006206 2.8e-09 67.0 205 23.4
Actinidia36514 Actinidia chinensis HOM05D005053 ORTHO05D006206 3.7e-09 66.6 205 24.4
COL.COLO4_11341 Corchorus olitorius HOM05D005053 ORTHO05D006206 3.7e-09 66.6 205 27.3
Dinv39902 Davidia involucrata HOM05D005053 ORTHO05D006206 3.7e-09 66.6 195 27.2
Lj7A44T18 Lonicera japonica HOM05D005053 ORTHO05D006206 3.7e-09 66.6 201 27.4
MD15G1276200 Malus domestica HOM05D005053 ORTHO05D006206 3.7e-09 66.6 205 24.9
SGA_v2.0_scaffold204G41608 Striga asiatica HOM05D005053 ORTHO05D006206 3.7e-09 66.6 206 25.2
SGA_v2.0_scaffold27G11440 Striga asiatica HOM05D005053 ORTHO05D006206 3.7e-09 66.6 206 25.2
DCAR_025697 Daucus carota HOM05D005053 ORTHO05D006206 4.8e-09 66.2 191 28.3
Os12g0428200 Oryza sativa ssp. japonica HOM05D005053 ORTHO05D006206 4.8e-09 66.2 185 25.9
QL06p043337 Quercus lobata HOM05D005053 ORTHO05D006206 4.8e-09 66.2 194 27.3
Nn6g32115 Nelumbo nucifera HOM05D005053 ORTHO05D006206 6.3e-09 65.9 199 25.6
SEGI_13826 Sequoiadendron giganteum HOM05D005053 ORTHO05D006206 6.3e-09 65.9 207 23.2
BcaC04g23174 Brassica carinata HOM05D005053 ORTHO05D006206 8.2e-09 65.5 187 24.1
C09p11390 Brassica napus HOM05D005053 ORTHO05D006206 8.2e-09 65.5 187 24.1
TWI09G0689 Tripterygium wilfordii HOM05D005053 ORTHO05D006206 8.2e-09 65.5 205 24.9
BolC9t54027H Brassica oleracea HOM05D005053 ORTHO05D006206 1.1e-08 65.1 188 23.4
CARHR280750 Cardamine hirsuta HOM05D005053 ORTHO05D006206 1.1e-08 65.1 186 23.1
Potri.007G037800 Populus trichocarpa HOM05D005053 ORTHO05D006206 1.1e-08 65.1 221 23.5
TWI53G1273 Tripterygium wilfordii HOM05D005053 ORTHO05D006206 1.1e-08 65.1 206 25.2
TAR628G0491 Trochodendron aralioides HOM05D005053 ORTHO05D006206 1.4e-08 64.7 234 23.5
GSVIVG01005060001 Vitis vinifera HOM05D005053 ORTHO05D006206 1.4e-08 64.7 205 24.9
Ah.02g124120 Amaranthus hybridus HOM05D005053 ORTHO05D006206 1.8e-08 64.3 195 26.7
AT5G66930 Arabidopsis thaliana HOM05D005053 ORTHO05D006206 1.8e-08 64.3 186 23.7
Eucgr.H01988 Eucalyptus grandis HOM05D005053 ORTHO05D006206 1.8e-08 64.3 205 24.9
Sc03g0001310 Simmondsia chinensis HOM05D005053 ORTHO05D006206 1.8e-08 64.3 204 23.5
AL8G44450 Arabidopsis lyrata HOM05D005053 ORTHO05D006206 2.4e-08 63.9 186 22.6
Peaxi162Scf00993g00120 Petunia axillaris HOM05D005053 ORTHO05D006206 2.4e-08 63.9 205 23.9
Thecc.01G049700 Theobroma cacao HOM05D005053 ORTHO05D006206 2.4e-08 63.9 206 24.3
Peaxi162Scf00049g01010 Petunia axillaris HOM05D005053 ORTHO05D006206 3.1e-08 63.5 205 23.4
Rhsim08G0104900 Rhododendron simsii HOM05D005053 ORTHO05D006206 3.1e-08 63.5 245 24.5
Atru.chr3.440 Acer truncatum HOM05D005053 ORTHO05D006206 4.1e-08 63.2 205 25.4
Gohir.A12G069100 Gossypium hirsutum HOM05D005053 ORTHO05D006206 4.1e-08 63.2 210 24.8
Gohir.D12G090200 Gossypium hirsutum HOM05D005053 ORTHO05D006206 4.1e-08 63.2 210 24.8
Carub.0008s2757 Capsella rubella HOM05D005053 ORTHO05D006206 5.3e-08 62.8 186 22.6
RhsimUnG0070600 Rhododendron simsii HOM05D005053 ORTHO05D006206 5.3e-08 62.8 230 23.9
Solyc02g090330.3 Solanum lycopersicum HOM05D005053 ORTHO05D006206 5.3e-08 62.8 205 23.4
BcaC06g34767 Brassica carinata HOM05D005053 ORTHO05D006206 7.0e-08 62.4 183 23.0
C07p24820 Brassica napus HOM05D005053 ORTHO05D006206 7.0e-08 62.4 183 23.0
BraA09t36613Z Brassica rapa HOM05D005053 ORTHO05D006206 7.0e-08 62.4 186 23.7
Duzib264G0685 Durio zibethinus HOM05D005053 ORTHO05D006206 7.0e-08 62.4 210 25.2
Gorai.008G072800 Gossypium raimondii HOM05D005053 ORTHO05D006206 7.0e-08 62.4 205 24.4
Solyc02g065180.3 Solanum lycopersicum HOM05D005053 ORTHO05D006206 7.0e-08 62.4 205 22.9
Sopen02g015310 Solanum pennellii HOM05D005053 ORTHO05D006206 7.0e-08 62.4 205 22.9
A09p09640 Brassica napus HOM05D005053 ORTHO05D006206 1.2e-07 61.6 186 23.1
PGSC0003DMG400010070 Solanum tuberosum HOM05D005053 ORTHO05D006206 1.2e-07 61.6 205 24.9
BcaB02g09970 Brassica carinata HOM05D005053 ORTHO05D006206 1.5e-07 61.2 186 22.6
Ciclev10026393m.g Citrus clementina HOM05D005053 ORTHO05D006206 1.5e-07 61.2 195 26.2
Mapoly0011s0084 Marchantia polymorpha HOM05D005053 ORTHO05D006206 1.5e-07 61.2 197 24.4
BolC7t43007H Brassica oleracea HOM05D005053 ORTHO05D006206 2.0e-07 60.8 188 23.4
SMO271G0126 Selaginella moellendorffii HOM05D005053 ORTHO05D006206 2.0e-07 60.8 207 23.7
THA.LOC104821262 Tarenaya hassleriana HOM05D005053 ORTHO05D006206 2.0e-07 60.8 205 22.9
Sp2g29730 Schrenkiella parvula HOM05D005053 ORTHO05D006206 2.6e-07 60.5 186 21.5
A07p16970 Brassica napus HOM05D005053 ORTHO05D006206 3.4e-07 60.1 183 24.0
Zm00001eb184240 Zea mays HOM05D005053 ORTHO05D006206 3.4e-07 60.1 185 24.3
BcaC03g18393 Brassica carinata HOM05D005053 ORTHO05D006206 4.5e-07 59.7 204 23.5
C02p64670 Brassica napus HOM05D005053 ORTHO05D006206 4.5e-07 59.7 204 23.5
BolC2t12528H Brassica oleracea HOM05D005053 ORTHO05D006206 4.5e-07 59.7 204 23.5
Nitab4.5_0000806g0140 Nicotiana tabacum HOM05D005053 ORTHO05D006206 4.5e-07 59.7 205 24.9
Nitab4.5_0009901g0010 Nicotiana tabacum HOM05D005053 ORTHO05D006206 4.5e-07 59.7 218 24.3
AagrBONN_evm.TU.Sc2ySwM_344.1822 Anthoceros agrestis HOM05D005053 ORTHO05D006206 5.9e-07 59.3 196 25.5
Duzib264G0045 Durio zibethinus HOM05D005053 ORTHO05D006206 5.9e-07 59.3 210 24.8
Thhalv10005270m.g Eutrema salsugineum HOM05D005053 ORTHO05D006206 5.9e-07 59.3 178 23.0
MBI16_g19902_MAGBIO Magnolia biondii HOM05D005053 ORTHO05D006206 7.7e-07 58.9 193 22.8
Pp3c11_5110 Physcomitrium patens HOM05D005053 ORTHO05D006206 7.7e-07 58.9 209 23.4
Nn5g29376 Nelumbo nucifera HOM05D005053 ORTHO05D006206 1.0e-06 58.5 205 23.9
BraA07t29424Z Brassica rapa HOM05D005053 ORTHO05D006206 1.3e-06 58.2 183 23.5
CiPaw.01G025900 Carya illinoinensis HOM05D005053 ORTHO05D006206 1.3e-06 58.2 192 26.6
Manes.13G129200 Manihot esculenta HOM05D005053 ORTHO05D006206 1.7e-06 57.8 205 23.9


User provided reference genes

Program Settings