Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa024504 Carpinus fangiana HOM05D002209 ORTHO05D004761 1.1e-306 1055.8 557 100.0
SMO367G0254 Selaginella moellendorffii HOM05D002209 ORTHO05D004761 1.9e-11 75.1 410 24.1
Pp3c24_12050 Physcomitrium patens HOM05D002209 ORTHO05D004761 1.6e-10 72.0 378 24.6
Pp3c20_5170 Physcomitrium patens HOM05D002209 ORTHO05D004761 4.7e-10 70.5 272 25.4
CBR_g38112 Chara braunii HOM05D002209 ORTHO05D004761 1.0e-09 69.3 224 24.1
Mapoly0003s0191 Marchantia polymorpha HOM05D002209 ORTHO05D004761 1.0e-09 69.3 378 22.5
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 1.4e-09 68.9 263 25.9
Sp1g35610 Schrenkiella parvula HOM05D002209 ORTHO05D004761 2.3e-09 68.2 262 26.7
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 4.0e-09 67.4 419 23.4
AagrBONN_evm.TU.Sc2ySwM_344.1865 Anthoceros agrestis HOM05D002209 ORTHO05D004761 5.2e-09 67.0 224 26.3
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 5.2e-09 67.0 419 23.2
BcaB07g33725 Brassica carinata HOM05D002209 ORTHO05D004761 6.8e-09 66.6 261 25.7
BcaC09g48771 Brassica carinata HOM05D002209 ORTHO05D004761 6.8e-09 66.6 419 23.2
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 6.8e-09 66.6 419 23.2
COL.COLO4_05870 Corchorus olitorius HOM05D002209 ORTHO05D004761 8.8e-09 66.2 381 25.5
BolC3t17231H Brassica oleracea HOM05D002209 ORTHO05D004761 2.0e-08 65.1 263 25.9
Carub.0003s1787 Capsella rubella HOM05D002209 ORTHO05D004761 2.0e-08 65.1 392 23.5
A03p40560 Brassica napus HOM05D002209 ORTHO05D004761 2.6e-08 64.7 263 25.5
A06p04280 Brassica napus HOM05D002209 ORTHO05D004761 2.6e-08 64.7 225 24.0
Thecc.03G048800 Theobroma cacao HOM05D002209 ORTHO05D004761 2.6e-08 64.7 382 24.9
TWI81G0085 Tripterygium wilfordii HOM05D002209 ORTHO05D004761 2.6e-08 64.7 423 26.2
AL1G55300 Arabidopsis lyrata HOM05D002209 ORTHO05D004761 3.4e-08 64.3 225 26.2
THA.LOC104820369 Tarenaya hassleriana HOM05D002209 ORTHO05D004761 4.4e-08 63.9 384 21.9
AT3G18160 Arabidopsis thaliana HOM05D002209 ORTHO05D004761 5.7e-08 63.5 237 25.7
CARHR093480 Cardamine hirsuta HOM05D002209 ORTHO05D004761 5.7e-08 63.5 379 22.4
CARHR038280 Cardamine hirsuta HOM05D002209 ORTHO05D004761 7.5e-08 63.2 379 21.4
Aa31LG10G5170 Aethionema arabicum HOM05D003754 ORTHO05D004530 9.8e-08 62.8 389 21.9
BcaB04g18980 Brassica carinata HOM05D002209 ORTHO05D004761 9.8e-08 62.8 303 25.4
Sp3g16270 Schrenkiella parvula HOM05D002209 ORTHO05D004761 1.3e-07 62.4 387 23.5
Duzib084G0729 Durio zibethinus HOM05D002209 ORTHO05D004761 1.7e-07 62.0 382 24.3
AT1G48635 Arabidopsis thaliana HOM05D002209 ORTHO05D004761 3.7e-07 60.8 225 24.0
Gohir.A09G051300 Gossypium hirsutum HOM05D002209 ORTHO05D004761 4.9e-07 60.5 380 24.7
Gohir.D09G052400 Gossypium hirsutum HOM05D002209 ORTHO05D004761 8.3e-07 59.7 380 24.7
Gorai.006G057200 Gossypium raimondii HOM05D002209 ORTHO05D004761 8.3e-07 59.7 380 24.7
BraA03t13213Z Brassica rapa HOM05D002209 ORTHO05D004761 1.1e-06 59.3 240 25.8
Prupe.5G229900 Prunus persica HOM05D002209 ORTHO05D004761 1.1e-06 59.3 377 26.5
BcaC08g43072 Brassica carinata HOM05D002209 ORTHO05D004761 1.4e-06 58.9 225 24.4
C06p03290 Brassica napus HOM05D002209 ORTHO05D004761 1.4e-06 58.9 225 24.4
C03p49370 Brassica napus HOM05D002209 ORTHO05D004761 2.4e-06 58.2 273 25.3
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 3.1e-06 57.8 378 21.2
BcaB04g20791 Brassica carinata HOM05D002209 ORTHO05D004761 4.1e-06 57.4 419 22.7
CiPaw.16G090800 Carya illinoinensis HOM05D002209 ORTHO05D004761 5.4e-06 57.0 379 22.7
Carub.0001s3778 Capsella rubella HOM05D002209 ORTHO05D004761 7.0e-06 56.6 379 21.9
ClCG06G014470 Citrullus lanatus HOM05D002209 ORTHO05D004761 7.0e-06 56.6 310 23.2
AL3G31330 Arabidopsis lyrata HOM05D002209 ORTHO05D004761 9.2e-06 56.2 393 22.9
Hund22655 Selenicereus undatus HOM05D002209 ORTHO05D004761 9.2e-06 56.2 244 25.0


User provided reference genes

Program Settings