Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa024171 Carpinus fangiana HOM05D001114 ORTHO05D000940 1.3e-190 669.5 321 100.0
Cfa026299 Carpinus fangiana HOM05D001114 ORTHO05D003462 3.9e-33 146.4 230 37.4
Haze_26497 Corylus avellana HOM05D001114 ORTHO05D000940 1.6e-15 87.8 282 29.1
Mapoly0001s0183 Marchantia polymorpha HOM05D001114 ORTHO05D000940 9.9e-13 78.6 305 26.9
Cre06.g303900 Chlamydomonas reinhardtii HOM05D001114 ORTHO05D000940 8.4e-12 75.5 167 31.7
Ca_24679_v3 Cicer arietinum L. HOM05D001114 ORTHO05D000940 1.1e-11 75.1 266 27.8
Cc07_g07200 Coffea canephora HOM05D001114 ORTHO05D000940 1.1e-11 75.1 192 30.2
Lalb_Chr16g0378931 Lupinus albus HOM05D001114 ORTHO05D000940 1.9e-11 74.3 239 28.0
Nitab4.5_0000142g0240 Nicotiana tabacum HOM05D001114 ORTHO05D000940 1.9e-11 74.3 192 31.2
TPR.G9334 Trifolium pratense HOM05D001114 ORTHO05D000940 1.9e-11 74.3 189 30.7
Cre04.g211750 Chlamydomonas reinhardtii HOM05D064114 ORTHO05D141742 3.2e-11 73.6 256 28.1
Dinv26944 Davidia involucrata HOM05D000714 ORTHO05D000940 3.2e-11 73.6 206 29.6
Peaxi162Scf00548g00226 Petunia axillaris HOM05D001114 ORTHO05D000940 4.2e-11 73.2 192 30.7
Manes.12G115900 Manihot esculenta HOM05D001114 ORTHO05D000940 7.1e-11 72.4 203 30.0
Manes.13G110400 Manihot esculenta HOM05D001114 ORTHO05D000940 7.1e-11 72.4 203 29.6
PGR102G1822 Punica granatum HOM05D001114 ORTHO05D000940 7.1e-11 72.4 195 29.7
Glyma.02G207000 Glycine max HOM05D001114 ORTHO05D000940 9.3e-11 72.0 192 29.2
SHI02831 Sapria himalayana HOM05D001114 ORTHO05D000940 9.3e-11 72.0 192 29.2
EL10Ac8g18903 Beta vulgaris HOM05D001114 ORTHO05D000940 1.2e-10 71.6 292 24.0
Phvul.003G153200 Phaseolus vulgaris HOM05D001114 ORTHO05D000940 1.2e-10 71.6 192 30.2
Atru.chr7.384 Acer truncatum HOM05D001114 ORTHO05D000940 1.6e-10 71.2 191 27.2
Ciclev10008677m.g Citrus clementina HOM05D001114 ORTHO05D000940 1.6e-10 71.2 191 28.8
TWI39G1053 Tripterygium wilfordii HOM05D001114 ORTHO05D000940 1.6e-10 71.2 192 31.2
PRCOL_00001358 Prasinoderma coloniale HOM05D001114 ORTHO05D000940 2.1e-10 70.9 274 27.4
arahy.Tifrunner.gnm1.ann1.14IIV2 Arachis hypogaea HOM05D001114 ORTHO05D000940 2.7e-10 70.5 191 27.2
QL06p039421 Quercus lobata HOM05D001114 ORTHO05D000940 2.7e-10 70.5 192 30.7
RcHm_v2.0_Chr2g0108351 Rosa chinensis HOM05D001114 ORTHO05D000940 3.5e-10 70.1 188 28.7
Solyc02g092230.3 Solanum lycopersicum HOM05D001114 ORTHO05D000940 3.5e-10 70.1 192 30.2
Sopen02g036800 Solanum pennellii HOM05D001114 ORTHO05D000940 3.5e-10 70.1 192 30.2
arahy.Tifrunner.gnm1.ann1.ALJH5D Arachis hypogaea HOM05D001114 ORTHO05D000940 4.6e-10 69.7 239 27.2
arahy.Tifrunner.gnm1.ann1.X02P63 Arachis hypogaea HOM05D001114 ORTHO05D000940 4.6e-10 69.7 239 27.2
MSTRG.2816 Avicennia marina HOM05D001114 ORTHO05D000940 4.6e-10 69.7 192 29.7
Oeu032427.1 Olea europaea HOM05D001114 ORTHO05D000940 4.6e-10 69.7 203 29.6
Psat2g171840 Pisum sativum HOM05D001114 ORTHO05D000940 4.6e-10 69.7 189 29.6
arahy.Tifrunner.gnm1.ann1.SP0UUF Arachis hypogaea HOM05D001114 ORTHO05D000940 7.9e-10 68.9 200 29.5
BcaNung05786 Brassica carinata HOM05D001114 ORTHO05D000940 7.9e-10 68.9 259 25.5
BcaNung05787 Brassica carinata HOM05D001114 ORTHO05D000940 7.9e-10 68.9 259 25.5
CAN.G1075.47 Capsicum annuum HOM05D001114 ORTHO05D000940 7.9e-10 68.9 192 30.2
Haze_15270 Corylus avellana HOM05D001114 ORTHO05D000940 7.9e-10 68.9 192 30.2
Lalb_Chr05g0213761 Lupinus albus HOM05D001114 ORTHO05D000940 7.9e-10 68.9 189 30.7
PGSC0003DMG400021438 Solanum tuberosum HOM05D001114 ORTHO05D000940 7.9e-10 68.9 192 29.7
Atru.chr3.1030 Acer truncatum HOM05D001114 ORTHO05D000940 1.0e-09 68.6 192 29.2
Aa31LG6G14580 Aethionema arabicum HOM05D001114 ORTHO05D000940 1.3e-09 68.2 192 29.2
AL7G13090 Arabidopsis lyrata HOM05D001114 ORTHO05D000940 1.3e-09 68.2 192 29.2
AT4G37680 Arabidopsis thaliana HOM05D001114 ORTHO05D000940 1.3e-09 68.2 192 29.2
Thhalv10025437m.g Eutrema salsugineum HOM05D001114 ORTHO05D000940 1.8e-09 67.8 192 29.2
Medtr5g015270 Medicago truncatula HOM05D001114 ORTHO05D000940 1.8e-09 67.8 189 29.6
BolC7t46671H Brassica oleracea HOM05D001114 ORTHO05D000940 2.3e-09 67.4 259 25.5
Carub.0007s0259 Capsella rubella HOM05D001114 ORTHO05D000940 2.3e-09 67.4 192 29.2
MELO3C007646.2 Cucumis melo HOM05D001114 ORTHO05D000940 2.3e-09 67.4 188 28.2
FvH4_1g17920 Fragaria vesca HOM05D001114 ORTHO05D000940 2.3e-09 67.4 188 28.2
FAN19G2658 Fragaria x ananassa HOM05D001114 ORTHO05D000940 2.3e-09 67.4 188 28.2
FAN23G2663 Fragaria x ananassa HOM05D001114 ORTHO05D000940 2.3e-09 67.4 188 28.2
FAN26G2805 Fragaria x ananassa HOM05D001114 ORTHO05D000940 2.3e-09 67.4 188 28.2
FAN28G1432 Fragaria x ananassa HOM05D001114 ORTHO05D000940 2.3e-09 67.4 188 28.2
Lalb_Chr13g0300661 Lupinus albus HOM05D001114 ORTHO05D000940 2.3e-09 67.4 192 29.2
Sp7g35330 Schrenkiella parvula HOM05D001114 ORTHO05D000940 2.3e-09 67.4 192 29.2
BcaNung02081 Brassica carinata HOM05D001114 ORTHO05D000940 3.0e-09 67.0 242 26.9
C07p62560 Brassica napus HOM05D001114 ORTHO05D000940 3.0e-09 67.0 242 26.9
Glyma.17G070900 Glycine max HOM05D001114 ORTHO05D000940 3.0e-09 67.0 192 29.2
Nitab4.5_0003129g0010 Nicotiana tabacum HOM05D001114 ORTHO05D000940 3.0e-09 67.0 192 29.7
Ciclev10025731m.g Citrus clementina HOM05D001114 ORTHO05D000940 3.9e-09 66.6 188 28.2
CsaV3_6G044210 Cucumis sativus L. HOM05D001114 ORTHO05D000940 3.9e-09 66.6 188 27.7
Lj6g0024092 Lotus japonicus HOM05D001114 ORTHO05D000940 3.9e-09 66.6 191 27.7
unitig_52.g17606 Utricularia gibba HOM05D001114 ORTHO05D000940 3.9e-09 66.6 192 29.7
CDE06G2762 Ceratophyllum demersum HOM05D001114 ORTHO05D000940 5.1e-09 66.2 192 30.2
Psat5g037920 Pisum sativum HOM05D000323 ORTHO05D000940 5.1e-09 66.2 202 27.7
VMungo1215G0223 Vigna mungo HOM05D001114 ORTHO05D000940 5.1e-09 66.2 192 29.2
BcaNung05785 Brassica carinata HOM05D001114 ORTHO05D000940 6.7e-09 65.9 192 28.6
A01p01330 Brassica napus HOM05D001114 ORTHO05D000940 6.7e-09 65.9 192 28.6
A03p65460 Brassica napus HOM05D001114 ORTHO05D000940 6.7e-09 65.9 259 25.1
C01p01490 Brassica napus HOM05D001114 ORTHO05D000940 6.7e-09 65.9 192 28.6
BolC1t00146H Brassica oleracea HOM05D001114 ORTHO05D000940 6.7e-09 65.9 192 28.6
BraA01t00130Z Brassica rapa HOM05D001114 ORTHO05D000940 6.7e-09 65.9 192 28.6
BraA03t15598Z Brassica rapa HOM05D001114 ORTHO05D000940 6.7e-09 65.9 259 25.1
ClCG01G017680 Citrullus lanatus HOM05D001114 ORTHO05D000940 6.7e-09 65.9 189 28.0
COL.COLO4_36573 Corchorus olitorius HOM05D001114 ORTHO05D000940 6.7e-09 65.9 191 26.2
CDE04G2644 Ceratophyllum demersum HOM05D001114 ORTHO05D000940 1.1e-08 65.1 192 30.2
TPR.G9522 Trifolium pratense HOM05D001114 ORTHO05D000940 1.1e-08 65.1 195 26.2
vmacro18021 Vaccinium macrocarpon HOM05D001114 ORTHO05D000940 1.1e-08 65.1 188 27.1
CiPaw.01G003300 Carya illinoinensis HOM05D001114 ORTHO05D000940 1.5e-08 64.7 192 29.2
Sed0013868 Sechium edule HOM05D001114 ORTHO05D000940 1.5e-08 64.7 189 27.5
AagrBONN_evm.TU.Sc2ySwM_368.2702 Anthoceros agrestis HOM05D001114 ORTHO05D000940 1.9e-08 64.3 188 28.2
PSO017G6169 Papaver somniferum HOM05D001114 ORTHO05D000940 1.9e-08 64.3 188 28.2
PSO170G6020 Papaver somniferum HOM05D001114 ORTHO05D000940 1.9e-08 64.3 188 28.2
Dinv42814 Davidia involucrata HOM05D001114 ORTHO05D000940 2.5e-08 63.9 212 26.9
Dinv43286 Davidia involucrata HOM05D001114 ORTHO05D000940 2.5e-08 63.9 212 26.9
CSS0006963 Camellia sinensis var. sinensis HOM05D001114 ORTHO05D000940 5.6e-08 62.8 202 27.7
TAR024G0003 Trochodendron aralioides HOM05D001114 ORTHO05D000940 5.6e-08 62.8 191 25.7
TAR026G0003 Trochodendron aralioides HOM05D001114 ORTHO05D000940 5.6e-08 62.8 191 25.7
Hma1.2p1_1084F.1_g255340 Hydrangea macrophylla HOM05D001114 ORTHO05D000940 1.3e-07 61.6 195 27.2
Mapoly0077s0059 Marchantia polymorpha HOM05D001114 ORTHO05D000940 1.3e-07 61.6 316 25.3
Rhsim08G0092900 Rhododendron simsii HOM05D001114 ORTHO05D000940 1.3e-07 61.6 188 26.6
Gohir.A02G150700 Gossypium hirsutum HOM05D001114 ORTHO05D000940 2.8e-07 60.5 178 29.2
Medtr0066s0050 Medicago truncatula HOM05D001114 ORTHO05D000940 2.8e-07 60.5 178 26.4
VMungo1309G1801 Vigna mungo HOM05D001114 ORTHO05D000940 2.8e-07 60.5 191 27.2
CARHR118140 Cardamine hirsuta HOM05D001114 ORTHO05D000940 3.7e-07 60.1 191 28.3
GSVIVG01006023001 Vitis vinifera HOM05D001114 ORTHO05D000940 3.7e-07 60.1 190 27.4
SalBow1G5510 Salvia bowleyana HOM05D001114 ORTHO05D000940 6.2e-07 59.3 199 26.6
Actinidia21942 Actinidia chinensis HOM05D001114 ORTHO05D000940 8.1e-07 58.9 202 26.7
CSS0018808 Camellia sinensis var. sinensis HOM05D001114 ORTHO05D000940 8.1e-07 58.9 188 26.6
DCAR_021463 Daucus carota HOM05D001114 ORTHO05D000940 8.1e-07 58.9 188 26.6
Mapoly0077s0057 Marchantia polymorpha HOM05D001114 ORTHO05D000940 8.1e-07 58.9 273 24.9
Rhsim03G0251900 Rhododendron simsii HOM05D001114 ORTHO05D000940 8.1e-07 58.9 205 27.3
CSS0049399 Camellia sinensis var. sinensis HOM05D001114 ORTHO05D000940 1.1e-06 58.5 188 26.6
AL4G14270 Arabidopsis lyrata HOM05D001114 ORTHO05D000940 1.4e-06 58.2 191 26.7
AT2G24150 Arabidopsis thaliana HOM05D001114 ORTHO05D000940 1.4e-06 58.2 191 26.7
DCAR_009327 Daucus carota HOM05D005191 ORTHO05D006725 1.4e-06 58.2 302 24.8
Lsat_1_v5_gn_8_61081 Lactuca sativa HOM05D001114 ORTHO05D000940 1.8e-06 57.8 276 25.7
SGA_v2.0_scaffold79G25650 Striga asiatica HOM05D001114 ORTHO05D000940 1.8e-06 57.8 276 26.1
Cc06_g10690 Coffea canephora HOM05D001114 ORTHO05D000940 2.4e-06 57.4 178 27.0
vmacro06158 Vaccinium macrocarpon HOM05D001114 ORTHO05D000940 2.4e-06 57.4 205 26.3
Potri.T124407 Populus trichocarpa HOM05D001114 ORTHO05D000940 3.1e-06 57.0 195 24.6
CAN.G980.17 Capsicum annuum HOM05D001114 ORTHO05D000940 4.0e-06 56.6 157 28.7
Oeu000516.1 Olea europaea HOM05D001114 ORTHO05D000940 4.0e-06 56.6 168 27.4
Peaxi162Scf00088g01218 Petunia axillaris HOM05D001114 ORTHO05D000940 4.0e-06 56.6 292 24.7
Aqoxy7G03295 Aquilegia oxysepala HOM05D001114 ORTHO05D000940 5.3e-06 56.2 216 25.0
CARHR246060 Cardamine hirsuta HOM05D001114 ORTHO05D000940 5.3e-06 56.2 146 29.5
Potri.018G124754 Populus trichocarpa HOM05D001114 ORTHO05D000940 5.3e-06 56.2 195 24.6
PSO170G4997 Papaver somniferum HOM05D001114 ORTHO05D000940 6.9e-06 55.8 223 24.2
Sabra18G0106200 Salix brachista HOM05D001114 ORTHO05D000940 9.0e-06 55.5 345 21.7
GSVIVG01012821001 Vitis vinifera HOM05D001114 ORTHO05D000940 9.0e-06 55.5 174 27.6


User provided reference genes

Program Settings