Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa024147 Carpinus fangiana HOM05D004709 ORTHO05D005669 2.3e-108 395.6 203 100.0
COL.COLO4_36893 Corchorus olitorius HOM05D004709 ORTHO05D005669 1.2e-08 64.3 69 50.7
Gohir.A12G180600 Gossypium hirsutum HOM05D004709 ORTHO05D005669 1.2e-08 64.3 78 48.7
Gohir.D12G183300 Gossypium hirsutum HOM05D004709 ORTHO05D005669 2.1e-08 63.5 69 49.3
Glyma.08G242600 Glycine max HOM05D004709 ORTHO05D005669 2.7e-08 63.2 83 45.8
Duzib205G1485 Durio zibethinus HOM05D004709 ORTHO05D005669 6.1e-08 62.0 69 49.3
Gohir.A03G069100 Gossypium hirsutum HOM05D004709 ORTHO05D005669 6.1e-08 62.0 81 43.2
Thecc.03G097000 Theobroma cacao HOM05D004709 ORTHO05D005669 6.1e-08 62.0 83 47.0
Gohir.D03G095600 Gossypium hirsutum HOM05D004709 ORTHO05D005669 7.9e-08 61.6 81 43.2
Gorai.003G100300 Gossypium raimondii HOM05D004709 ORTHO05D005669 7.9e-08 61.6 81 43.2
Glyma.18G264800 Glycine max HOM05D004709 ORTHO05D005669 1.0e-07 61.2 83 44.6
Manes.14G083600 Manihot esculenta HOM05D004709 ORTHO05D005669 1.0e-07 61.2 69 46.4
COL.COLO4_31014 Corchorus olitorius HOM05D004709 ORTHO05D005669 1.8e-07 60.5 69 47.8
Gorai.008G196600 Gossypium raimondii HOM05D004709 ORTHO05D005669 2.3e-07 60.1 69 47.8
Potri.009G079800 Populus trichocarpa HOM05D004709 ORTHO05D005669 3.0e-07 59.7 94 45.7
TWI18G0167 Tripterygium wilfordii HOM05D004709 ORTHO05D005669 3.0e-07 59.7 69 44.9
Cre08.g382850 Chlamydomonas reinhardtii HOM05D004709 ORTHO05D005669 6.7e-07 58.5 69 43.5
BraA02t09093Z Brassica rapa HOM05D004709 ORTHO05D005669 8.8e-07 58.2 58 53.4
Os10g0406600 Oryza sativa ssp. japonica HOM05D004709 ORTHO05D005669 8.8e-07 58.2 69 47.8
Rhsim08G0148900 Rhododendron simsii HOM05D004709 ORTHO05D005669 8.8e-07 58.2 72 48.6
Duzib084G0757 Durio zibethinus HOM05D004709 ORTHO05D005669 1.1e-06 57.8 69 46.4
Lsat_1_v5_gn_5_22101 Lactuca sativa HOM05D004709 ORTHO05D005669 1.1e-06 57.8 74 45.9
Nn7g35950 Nelumbo nucifera HOM05D004709 ORTHO05D005669 1.1e-06 57.8 84 44.0
Aa31LG11G2140 Aethionema arabicum HOM05D004709 ORTHO05D005669 1.5e-06 57.4 76 43.4
A02p41520 Brassica napus HOM05D004709 ORTHO05D005669 1.5e-06 57.4 58 53.4
Gohir.D12G183150 Gossypium hirsutum HOM05D004709 ORTHO05D005669 1.5e-06 57.4 60 51.7
TAR371G0159 Trochodendron aralioides HOM05D004709 ORTHO05D005669 1.5e-06 57.4 79 41.8
CBR_g38475 Chara braunii HOM05D004709 ORTHO05D005669 2.0e-06 57.0 69 37.7
ClCG04G011960 Citrullus lanatus HOM05D004709 ORTHO05D005669 2.0e-06 57.0 74 44.6
Ciclev10022528m.g Citrus clementina HOM05D004709 ORTHO05D005669 2.0e-06 57.0 85 40.0
CsaV3_1G005830 Cucumis sativus L. HOM05D004709 ORTHO05D005669 2.0e-06 57.0 74 43.2
Migut.D01673 Erythranthe guttata HOM05D004709 ORTHO05D005669 2.0e-06 57.0 69 46.4
PSO478G1650 Papaver somniferum HOM05D004709 ORTHO05D005669 2.0e-06 57.0 74 41.9
TAR622G0455 Trochodendron aralioides HOM05D004709 ORTHO05D005669 2.0e-06 57.0 66 47.0
Os08g0239000 Oryza sativa ssp. japonica HOM05D004709 ORTHO05D005669 2.6e-06 56.6 69 46.4
SalBow5G3312 Salvia bowleyana HOM05D004709 ORTHO05D005669 2.6e-06 56.6 69 43.5
Aqoxy3G03572 Aquilegia oxysepala HOM05D004709 ORTHO05D005669 3.3e-06 56.2 69 46.4
Cpa.g.sc94.6 Carica papaya HOM05D004709 ORTHO05D005669 3.3e-06 56.2 69 43.5
MELO3C002013.2 Cucumis melo HOM05D004709 ORTHO05D005669 3.3e-06 56.2 74 43.2
DCAR_013071 Daucus carota HOM05D000316 ORTHO05D000374 3.3e-06 56.2 69 49.3
MBI16_g16369_MAGBIO Magnolia biondii HOM05D004709 ORTHO05D005669 3.3e-06 56.2 74 43.2
Manes.06G087400 Manihot esculenta HOM05D004709 ORTHO05D005669 3.3e-06 56.2 88 45.5
Nn4g23362 Nelumbo nucifera HOM05D004709 ORTHO05D005669 3.3e-06 56.2 69 44.9
Peaxi162Scf00106g00072 Petunia axillaris HOM05D004709 ORTHO05D005669 3.3e-06 56.2 69 42.0
Pp3c1_9190 Physcomitrium patens HOM05D004709 ORTHO05D005669 3.3e-06 56.2 67 38.8
HanXRQChr05g0157171 Helianthus annuus HOM05D004709 ORTHO05D005669 4.4e-06 55.8 74 44.6
Atru.chr2.2420 Acer truncatum HOM05D004709 ORTHO05D005669 5.7e-06 55.5 69 44.9
CANSAT56G2672 Cannabis sativa HOM05D004709 ORTHO05D005669 5.7e-06 55.5 69 42.0
AUR62008495 Chenopodium quinoa HOM05D004709 ORTHO05D005669 5.7e-06 55.5 69 42.0
MELO3C017207.2 Cucumis melo HOM05D004709 ORTHO05D005669 5.7e-06 55.5 69 44.9
HanXRQChr04g0101451 Helianthus annuus HOM05D004709 ORTHO05D005669 5.7e-06 55.5 66 47.0
Nitab4.5_0002881g0040 Nicotiana tabacum HOM05D004709 ORTHO05D005669 5.7e-06 55.5 69 42.0
C02p61460 Brassica napus HOM05D004709 ORTHO05D005669 7.4e-06 55.1 58 51.7
C07p56170 Brassica napus HOM05D004709 ORTHO05D005669 7.4e-06 55.1 58 51.7
BolC2t12197H Brassica oleracea HOM05D004709 ORTHO05D005669 7.4e-06 55.1 58 51.7
Nitab4.5_0004511g0070 Nicotiana tabacum HOM05D004709 ORTHO05D005669 7.4e-06 55.1 69 42.0
SHI27018 Sapria himalayana HOM05D004709 ORTHO05D005669 7.4e-06 55.1 83 41.0
BcaC01g01257 Brassica carinata HOM05D004709 ORTHO05D005669 9.7e-06 54.7 58 50.0
A03p02360 Brassica napus HOM05D004709 ORTHO05D005669 9.7e-06 54.7 58 50.0
BolC3t21308H Brassica oleracea HOM05D004709 ORTHO05D005669 9.7e-06 54.7 58 50.0
ECA246G5156 Erigeron canadensis HOM05D004709 ORTHO05D005669 9.7e-06 54.7 73 46.6
Phvul.008G035200 Phaseolus vulgaris HOM05D004709 ORTHO05D005669 9.7e-06 54.7 76 43.4
Zm00001eb011200 Zea mays HOM05D004709 ORTHO05D005669 9.7e-06 54.7 69 42.0


User provided reference genes

Program Settings