Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa024054 Carpinus fangiana HOM05D009644 ORTHO05D012764 2.3e-274 948.3 494 100.0
Cfa021768 Carpinus fangiana HOM05D009644 ORTHO05D012764 2.3e-45 187.6 483 32.5
Cfa021882 Carpinus fangiana HOM05D009644 ORTHO05D012764 2.7e-41 174.1 428 32.0
Cfa024489 Carpinus fangiana HOM05D009644 ORTHO05D012764 3.1e-37 160.6 443 32.1
PRCOL_00005915 Prasinoderma coloniale HOM05D009644 ORTHO05D012764 8.6e-32 142.5 253 39.9
Mapoly0050s0101 Marchantia polymorpha HOM05D009644 ORTHO05D015874 6.8e-29 132.9 319 34.5
PRCOL_00006306 Prasinoderma coloniale HOM05D009644 ORTHO05D012764 2.0e-28 131.3 273 35.9
Cre07.g329500 Chlamydomonas reinhardtii HOM05D009644 ORTHO05D012764 6.4e-27 126.3 324 32.7
Pp3c7_11150 Physcomitrium patens HOM05D009644 ORTHO05D012764 6.6e-24 116.3 328 32.0
Cfa026104 Carpinus fangiana HOM05D009644 ORTHO05D012764 1.6e-22 111.7 230 35.2
MCO02G443 Micromonas commoda HOM05D009644 ORTHO05D012764 1.1e-21 109.0 311 32.5
Cre13.g585800 Chlamydomonas reinhardtii HOM05D009644 ORTHO05D012764 6.8e-21 106.3 328 31.7
Cre10.g459450 Chlamydomonas reinhardtii HOM05D009644 ORTHO05D012764 5.4e-18 96.7 319 28.8
PRCOL_00001983 Prasinoderma coloniale HOM05D034908 ORTHO05D012764 1.3e-16 92.0 312 31.1
Pp3s169_40 Physcomitrium patens HOM05D004541 ORTHO05D012764 2.5e-15 87.8 223 32.7
PRCOL_00000089 Prasinoderma coloniale HOM05D034908 ORTHO05D012764 4.3e-15 87.0 296 32.8
CBR_g9219 Chara braunii HOM05D000019 ORTHO05D000002 1.6e-14 85.1 197 32.5
MCO08G251 Micromonas commoda HOM05D009644 ORTHO05D012764 2.8e-14 84.3 338 28.7
AagrBONN_evm.TU.Sc2ySwM_117.1261 Anthoceros agrestis HOM05D009644 ORTHO05D012764 6.2e-14 83.2 147 39.5
PRCOL_00004473 Prasinoderma coloniale HOM05D009644 ORTHO05D012764 3.4e-12 77.4 284 28.5
PRCOL_00002386 Prasinoderma coloniale HOM05D034908 ORTHO05D012764 3.8e-11 73.9 316 30.4
CBR_g38846 Chara braunii HOM05D000019 ORTHO05D000048 1.5e-07 62.0 136 39.7
TAR376G0718 Trochodendron aralioides HOM05D000015 ORTHO05D002445 3.3e-07 60.8 94 37.2
Dinv31878 Davidia involucrata HOM05D000015 ORTHO05D002445 5.6e-07 60.1 84 40.5
AagrBONN_evm.TU.Sc2ySwM_362.1312 Anthoceros agrestis HOM05D000015 ORTHO05D000984 2.1e-06 58.2 66 43.9
Peaxi162Scf00672g00515 Petunia axillaris HOM05D000015 ORTHO05D002445 2.8e-06 57.8 64 42.2
SMO276G0049 Selaginella moellendorffii HOM05D000015 ORTHO05D003512 2.8e-06 57.8 103 39.8
Manes.18G012160 Manihot esculenta HOM05D000015 ORTHO05D002445 3.6e-06 57.4 89 36.0
HPP92_021706 Vanilla planifolia HOM05D000015 ORTHO05D003512 3.6e-06 57.4 119 32.8
VMungo1309G2142 Vigna mungo HOM05D000015 ORTHO05D002445 3.6e-06 57.4 93 35.5
ECA240G2220 Erigeron canadensis HOM05D000015 ORTHO05D000803 4.8e-06 57.0 107 33.6
PSO700G0181 Papaver somniferum HOM05D000015 ORTHO05D002445 4.8e-06 57.0 167 29.3
PRCOL_00004858 Prasinoderma coloniale HOM05D017248 ORTHO05D012764 4.8e-06 57.0 252 31.0
QL02p012414 Quercus lobata HOM05D000015 ORTHO05D002445 4.8e-06 57.0 105 34.3
ECA232G4702 Erigeron canadensis HOM05D000015 ORTHO05D000249 6.2e-06 56.6 98 39.8
Lsat_1_v5_gn_6_96200 Lactuca sativa HOM05D000015 ORTHO05D000803 6.2e-06 56.6 106 34.9
Solyc08g007670.1 Solanum lycopersicum HOM05D000015 ORTHO05D000803 6.2e-06 56.6 97 35.1
Solyc08g007680.1 Solanum lycopersicum HOM05D000015 ORTHO05D000803 6.2e-06 56.6 112 34.8
Sopen08g003630 Solanum pennellii HOM05D000015 ORTHO05D000803 6.2e-06 56.6 112 34.8
HPP92_020508 Vanilla planifolia HOM05D000015 ORTHO05D000270 6.2e-06 56.6 66 47.0
HPP92_020522 Vanilla planifolia HOM05D000015 ORTHO05D000270 6.2e-06 56.6 66 47.0
ECA240G0225 Erigeron canadensis HOM05D000015 ORTHO05D000803 8.1e-06 56.2 107 33.6


User provided reference genes

Program Settings