Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa024049 Carpinus fangiana HOM05D002437 ORTHO05D024869 1.7e-191 672.5 348 100.0
Mapoly0034s0092 Marchantia polymorpha HOM05D002437 ORTHO05D024869 7.9e-32 142.1 221 39.4
SMO367G0124 Selaginella moellendorffii HOM05D002437 ORTHO05D024869 3.1e-28 130.2 205 37.1
Pp3c1_18420 Physcomitrium patens HOM05D002437 ORTHO05D024869 1.3e-26 124.8 202 36.1
PRCOL_00003894 Prasinoderma coloniale HOM05D002437 ORTHO05D024869 1.4e-25 121.3 208 35.6
Mapoly0154s0046 Marchantia polymorpha HOM05D002437 ORTHO05D002831 2.7e-11 73.9 175 32.6
ATR0794G150 Amborella trichopoda HOM05D002437 ORTHO05D002831 1.3e-10 71.6 162 32.1
GSVIVG01030440001 Vitis vinifera HOM05D002437 ORTHO05D002831 2.2e-10 70.9 161 31.7
Ciclev10010222m.g Citrus clementina HOM05D002437 ORTHO05D002831 5.0e-10 69.7 126 33.3
HPP92_010202 Vanilla planifolia HOM05D002437 ORTHO05D002831 6.5e-10 69.3 121 36.4
Aa31LG2G8850 Aethionema arabicum HOM05D002437 ORTHO05D002831 8.5e-10 68.9 126 36.5
SGA_v2.0_scaffold7G03822 Striga asiatica HOM05D002437 ORTHO05D002831 8.5e-10 68.9 190 29.5
CAN.G1014.3 Capsicum annuum HOM05D002437 ORTHO05D002831 1.1e-09 68.6 126 33.3
Lj1A1232T92 Lonicera japonica HOM05D002437 ORTHO05D002831 1.1e-09 68.6 126 34.9
Nn1g03490 Nelumbo nucifera HOM05D002437 ORTHO05D002831 1.5e-09 68.2 155 32.3
arahy.Tifrunner.gnm1.ann1.FJ1N0Z Arachis hypogaea HOM05D002437 ORTHO05D002831 2.5e-09 67.4 126 34.1
arahy.Tifrunner.gnm1.ann1.L2Y6DG Arachis hypogaea HOM05D002437 ORTHO05D002831 2.5e-09 67.4 126 34.1
ClCG03G004660 Citrullus lanatus HOM05D002437 ORTHO05D002831 2.5e-09 67.4 126 34.9
Eucgr.D01338 Eucalyptus grandis HOM05D002437 ORTHO05D002831 2.5e-09 67.4 126 34.9
Nitab4.5_0006396g0020 Nicotiana tabacum HOM05D002437 ORTHO05D002831 2.5e-09 67.4 126 34.1
Solyc02g080640.4 Solanum lycopersicum HOM05D002437 ORTHO05D002831 2.5e-09 67.4 126 34.1
Sopen02g025350 Solanum pennellii HOM05D002437 ORTHO05D002831 2.5e-09 67.4 126 34.1
PGSC0003DMG400016477 Solanum tuberosum HOM05D002437 ORTHO05D002831 2.5e-09 67.4 126 34.1
CSS0035475 Camellia sinensis var. sinensis HOM05D002437 ORTHO05D002831 3.2e-09 67.0 151 31.8
CAN.G39.4 Capsicum annuum HOM05D002437 ORTHO05D002831 3.2e-09 67.0 126 33.3
Cfa000210 Carpinus fangiana HOM05D002437 ORTHO05D002831 3.2e-09 67.0 126 33.3
CDE02G3743 Ceratophyllum demersum HOM05D002437 ORTHO05D002831 3.2e-09 67.0 126 32.5
AUR62012721 Chenopodium quinoa HOM05D002437 ORTHO05D002831 3.2e-09 67.0 126 34.1
AUR62021935 Chenopodium quinoa HOM05D002437 ORTHO05D002831 3.2e-09 67.0 126 34.1
AUR62043469 Chenopodium quinoa HOM05D002437 ORTHO05D002831 3.2e-09 67.0 126 34.1
Cc09_g01560 Coffea canephora HOM05D002437 ORTHO05D002831 3.2e-09 67.0 126 33.3
Glyma.15G108700 Glycine max HOM05D002437 ORTHO05D002831 3.2e-09 67.0 126 34.9
Nitab4.5_0002827g0080 Nicotiana tabacum HOM05D002437 ORTHO05D002831 3.2e-09 67.0 126 33.3
Nitab4.5_0004810g0010 Nicotiana tabacum HOM05D002437 ORTHO05D002831 3.2e-09 67.0 126 33.3
PSO210G4275 Papaver somniferum HOM05D002437 ORTHO05D002831 3.2e-09 67.0 121 35.5
PSO832G3649 Papaver somniferum HOM05D002437 ORTHO05D002831 3.2e-09 67.0 121 35.5
Peaxi162Scf00331g01129 Petunia axillaris HOM05D002437 ORTHO05D002831 3.2e-09 67.0 126 33.3
Sopen02g011260 Solanum pennellii HOM05D002437 ORTHO05D002831 3.2e-09 67.0 126 33.3
BcaC02g10508 Brassica carinata HOM05D002437 ORTHO05D002831 4.2e-09 66.6 126 35.7
CiPaw.09G093000 Carya illinoinensis HOM05D002437 ORTHO05D002831 4.2e-09 66.6 126 33.3
CiPaw.10G072000 Carya illinoinensis HOM05D002437 ORTHO05D002831 4.2e-09 66.6 186 28.5
CDE05G0940 Ceratophyllum demersum HOM05D002437 ORTHO05D002831 4.2e-09 66.6 126 32.5
MELO3C002450.2 Cucumis melo HOM05D002437 ORTHO05D002831 4.2e-09 66.6 126 34.1
CsaV3_1G010690 Cucumis sativus L. HOM05D002437 ORTHO05D002831 4.2e-09 66.6 126 34.9
CsaV3_6G048960 Cucumis sativus L. HOM05D002437 ORTHO05D002831 4.2e-09 66.6 161 30.4
Duzib235G1449 Durio zibethinus HOM05D002437 ORTHO05D002831 4.2e-09 66.6 126 33.3
Gorai.010G180900 Gossypium raimondii HOM05D002437 ORTHO05D002831 4.2e-09 66.6 126 33.3
Oeu002743.1 Olea europaea HOM05D002437 ORTHO05D002831 4.2e-09 66.6 126 34.9
Potri.004G012100 Populus trichocarpa HOM05D002437 ORTHO05D002831 4.2e-09 66.6 126 34.9
Ah.09g234800 Amaranthus hybridus HOM05D002437 ORTHO05D002831 5.5e-09 66.2 126 34.1
Ah.14g087980 Amaranthus hybridus HOM05D002437 ORTHO05D002831 5.5e-09 66.2 166 31.3
Aqoxy1G03596 Aquilegia oxysepala HOM05D002437 ORTHO05D002831 5.5e-09 66.2 126 35.7
ClCG01G021900 Citrullus lanatus HOM05D002437 ORTHO05D002831 5.5e-09 66.2 126 33.3
Gohir.D06G154800 Gossypium hirsutum HOM05D002437 ORTHO05D002831 5.5e-09 66.2 126 34.1
Nn1g07167 Nelumbo nucifera HOM05D002437 ORTHO05D002831 5.5e-09 66.2 126 34.1
Phvul.003G079800 Phaseolus vulgaris HOM05D002437 ORTHO05D002831 5.5e-09 66.2 126 33.3
PGR004G0026 Punica granatum HOM05D002437 ORTHO05D002831 5.5e-09 66.2 129 34.1
Actinidia05508 Actinidia chinensis HOM05D002437 ORTHO05D002831 7.2e-09 65.9 126 33.3
Aqoxy1G02091 Aquilegia oxysepala HOM05D002437 ORTHO05D002831 7.2e-09 65.9 126 34.1
CSS0028007 Camellia sinensis var. sinensis HOM05D002437 ORTHO05D002831 7.2e-09 65.9 126 33.3
MELO3C007398.2 Cucumis melo HOM05D002437 ORTHO05D002831 7.2e-09 65.9 126 33.3
Glyma.07G261500 Glycine max HOM05D002437 ORTHO05D002831 7.2e-09 65.9 126 33.3
Gohir.A05G171200 Gossypium hirsutum HOM05D002437 ORTHO05D002831 7.2e-09 65.9 126 33.3
Lalb_Chr15g0087651 Lupinus albus HOM05D002437 ORTHO05D002831 7.2e-09 65.9 126 33.3
Lalb_Chr18g0056421 Lupinus albus HOM05D002437 ORTHO05D002831 7.2e-09 65.9 126 33.3
Nitab4.5_0000005g0310 Nicotiana tabacum HOM05D002437 ORTHO05D002831 7.2e-09 65.9 186 28.5
Oeu014930.1 Olea europaea HOM05D002437 ORTHO05D002831 7.2e-09 65.9 126 35.7
Hund23459 Selenicereus undatus HOM05D002437 ORTHO05D002831 7.2e-09 65.9 126 33.3
Atru.chr10.2242 Acer truncatum HOM05D002437 ORTHO05D002831 9.4e-09 65.5 188 28.7
BcaC06g31882 Brassica carinata HOM05D002437 ORTHO05D002831 9.4e-09 65.5 186 30.1
A03p67470 Brassica napus HOM05D002437 ORTHO05D002831 9.4e-09 65.5 186 30.1
C04p28100 Brassica napus HOM05D002437 ORTHO05D002831 9.4e-09 65.5 186 30.1
BolC4t24355H Brassica oleracea HOM05D002437 ORTHO05D002831 9.4e-09 65.5 186 30.1
BraA01t02724Z Brassica rapa HOM05D002437 ORTHO05D002831 9.4e-09 65.5 186 30.1
CSS0009987 Camellia sinensis var. sinensis HOM05D002437 ORTHO05D002831 9.4e-09 65.5 186 28.5
CSS0030143 Camellia sinensis var. sinensis HOM05D002437 ORTHO05D002831 9.4e-09 65.5 186 28.5
COL.COLO4_03544 Corchorus olitorius HOM05D002437 ORTHO05D044379 9.4e-09 65.5 212 29.2
MBI02_g00378_MAGBIO Magnolia biondii HOM05D002437 ORTHO05D002831 9.4e-09 65.5 126 32.5
MBI02_g09975_MAGBIO Magnolia biondii HOM05D002437 ORTHO05D002831 9.4e-09 65.5 126 32.5
Oeu013630.1 Olea europaea HOM05D002437 ORTHO05D002831 9.4e-09 65.5 126 34.1
Sp2g02490 Schrenkiella parvula HOM05D002437 ORTHO05D002831 9.4e-09 65.5 292 26.0
Solyc02g032860.3 Solanum lycopersicum HOM05D002437 ORTHO05D002831 9.4e-09 65.5 126 33.3
PGSC0003DMG400019872 Solanum tuberosum HOM05D002437 ORTHO05D002831 9.4e-09 65.5 126 33.3
vmacro22536 Vaccinium macrocarpon HOM05D002437 ORTHO05D002831 9.4e-09 65.5 126 34.1
Ca_00668_v3 Cicer arietinum L. HOM05D002437 ORTHO05D002831 1.2e-08 65.1 126 33.3
COL.COLO4_31790 Corchorus olitorius HOM05D002437 ORTHO05D002831 1.2e-08 65.1 126 33.3
Gohir.A06G148700 Gossypium hirsutum HOM05D002437 ORTHO05D002831 1.2e-08 65.1 126 33.3
Prupe.4G019200 Prunus persica HOM05D002437 ORTHO05D002831 1.2e-08 65.1 126 33.3
Sed0008709 Sechium edule HOM05D002437 ORTHO05D002831 1.2e-08 65.1 126 32.5
MSTRG.13135 Avicennia marina HOM05D002437 ORTHO05D002831 1.6e-08 64.7 126 32.5
Duzib160G0896 Durio zibethinus HOM05D002437 ORTHO05D002831 1.6e-08 64.7 126 32.5
Migut.M01329 Erythranthe guttata HOM05D002437 ORTHO05D002831 1.6e-08 64.7 186 28.5
Sc17g0007430 Simmondsia chinensis HOM05D002437 ORTHO05D002831 1.6e-08 64.7 126 32.5
SGA_v2.0_scaffold89G27468 Striga asiatica HOM05D002437 ORTHO05D002831 1.6e-08 64.7 186 28.5
EL10Ac8g20074 Beta vulgaris HOM05D002437 ORTHO05D002831 2.1e-08 64.3 160 30.0
AUR62020413 Chenopodium quinoa HOM05D002437 ORTHO05D002831 2.1e-08 64.3 121 34.7
Dinv13902 Davidia involucrata HOM05D002437 ORTHO05D002831 2.1e-08 64.3 126 33.3
Migut.H01574 Erythranthe guttata HOM05D002437 ORTHO05D002831 2.1e-08 64.3 186 28.0
Manes.16G006000 Manihot esculenta HOM05D002437 ORTHO05D002831 2.1e-08 64.3 126 34.1
Medtr2g023540 Medicago truncatula HOM05D002437 ORTHO05D002831 2.1e-08 64.3 151 31.1
Nitab4.5_0007864g0060 Nicotiana tabacum HOM05D002437 ORTHO05D002831 2.1e-08 64.3 126 33.3
Psat4g006280 Pisum sativum HOM05D002437 ORTHO05D002831 2.1e-08 64.3 126 34.1
PGR083G1495 Punica granatum HOM05D002437 ORTHO05D002831 2.1e-08 64.3 126 32.5
PGSC0003DMG402005074 Solanum tuberosum HOM05D002437 ORTHO05D002831 2.1e-08 64.3 126 33.3
Thecc.06G222500 Theobroma cacao HOM05D002437 ORTHO05D002831 2.1e-08 64.3 126 32.5
TPR.G13455 Trifolium pratense HOM05D002437 ORTHO05D002831 2.1e-08 64.3 126 33.3
TWI38G0801 Tripterygium wilfordii HOM05D002437 ORTHO05D002831 2.1e-08 64.3 126 33.3
TAR626G1698 Trochodendron aralioides HOM05D002437 ORTHO05D002831 2.1e-08 64.3 186 28.0
VMungo1215G2757 Vigna mungo HOM05D002437 ORTHO05D002831 2.1e-08 64.3 126 32.5
arahy.Tifrunner.gnm1.ann1.5H5XYM Arachis hypogaea HOM05D002437 ORTHO05D002831 2.7e-08 63.9 126 33.3
Cpa.g.sc152.28 Carica papaya HOM05D002437 ORTHO05D002831 2.7e-08 63.9 126 34.1
AUR62015802 Chenopodium quinoa HOM05D002437 ORTHO05D002831 2.7e-08 63.9 121 34.7
Ciclev10015162m.g Citrus clementina HOM05D002437 ORTHO05D002831 2.7e-08 63.9 126 32.5
Haze_06811 Corylus avellana HOM05D002437 ORTHO05D002831 2.7e-08 63.9 126 32.5
Hma1.2p1_0673F.1_g201480 Hydrangea macrophylla HOM05D002437 ORTHO05D002831 2.7e-08 63.9 186 30.1
Lalb_Chr20g0118721 Lupinus albus HOM05D002437 ORTHO05D002831 2.7e-08 63.9 126 34.1
Sed0011125 Sechium edule HOM05D002437 ORTHO05D002831 2.7e-08 63.9 126 33.3
Hund21415 Selenicereus undatus HOM05D002437 ORTHO05D002831 2.7e-08 63.9 126 32.5
TPR.G37086 Trifolium pratense HOM05D002437 ORTHO05D002831 2.7e-08 63.9 126 33.3
VMungo0540G2362 Vigna mungo HOM05D002437 ORTHO05D002831 2.7e-08 63.9 126 33.3
arahy.Tifrunner.gnm1.ann1.E3Q78B Arachis hypogaea HOM05D002437 ORTHO05D002831 3.6e-08 63.5 126 33.3
Carub.0006s3244 Capsella rubella HOM05D002437 ORTHO05D002831 3.6e-08 63.5 160 30.6
Gohir.D05G174200 Gossypium hirsutum HOM05D002437 ORTHO05D002831 3.6e-08 63.5 126 32.5
Gorai.009G179500 Gossypium raimondii HOM05D002437 ORTHO05D002831 3.6e-08 63.5 126 32.5
HanXRQChr05g0129431 Helianthus annuus HOM05D002437 ORTHO05D002831 3.6e-08 63.5 126 32.5
Lj6g0003909 Lotus japonicus HOM05D002437 ORTHO05D002831 3.6e-08 63.5 123 33.3
MD05G1348200 Malus domestica HOM05D002437 ORTHO05D002831 3.6e-08 63.5 126 32.5
PSO541G5065 Papaver somniferum HOM05D002437 ORTHO05D002831 3.6e-08 63.5 221 26.7
Peaxi162Scf00147g00511 Petunia axillaris HOM05D002437 ORTHO05D002831 3.6e-08 63.5 126 31.7
THA.LOC104809496 Tarenaya hassleriana HOM05D002437 ORTHO05D002831 3.6e-08 63.5 126 33.3
AL6G48070 Arabidopsis lyrata HOM05D002437 ORTHO05D002831 4.7e-08 63.2 160 30.6
CANSAT56G2408 Cannabis sativa HOM05D002437 ORTHO05D002831 4.7e-08 63.2 126 32.5
MD10G1323000 Malus domestica HOM05D002437 ORTHO05D002831 4.7e-08 63.2 126 32.5
Peaxi162Scf00306g00611 Petunia axillaris HOM05D002437 ORTHO05D002831 4.7e-08 63.2 188 28.7
Phvul.006G149200 Phaseolus vulgaris HOM05D002437 ORTHO05D002831 4.7e-08 63.2 126 32.5
Aa31LG9G9770 Aethionema arabicum HOM05D002437 ORTHO05D002831 6.1e-08 62.8 128 32.8
AL2G13750 Arabidopsis lyrata HOM05D002437 ORTHO05D002831 6.1e-08 62.8 288 26.7
ECA236G1907 Erigeron canadensis HOM05D002437 ORTHO05D002831 6.1e-08 62.8 126 32.5
Hma1.2p1_2583F.1_g324850 Hydrangea macrophylla HOM05D002437 ORTHO05D002831 6.1e-08 62.8 126 31.7
Rhsim06G0218800 Rhododendron simsii HOM05D002437 ORTHO05D002831 6.1e-08 62.8 127 33.1
FvH4_3g01900 Fragaria vesca HOM05D002437 ORTHO05D002831 8.0e-08 62.4 126 33.3
FAN21G0125 Fragaria x ananassa HOM05D002437 ORTHO05D002831 8.0e-08 62.4 126 33.3
PSO675G0270 Papaver somniferum HOM05D002437 ORTHO05D002831 1.0e-07 62.0 221 26.2
RcHm_v2.0_Chr5g0002761 Rosa chinensis HOM05D002437 ORTHO05D002831 1.0e-07 62.0 126 33.3
SalBow1G5792 Salvia bowleyana HOM05D002437 ORTHO05D002831 1.0e-07 62.0 126 33.3
Sp6g04320 Schrenkiella parvula HOM05D002437 ORTHO05D002831 1.0e-07 62.0 126 34.1
Solyc03g031620.3 Solanum lycopersicum HOM05D002437 ORTHO05D002831 1.0e-07 62.0 216 26.4
Sopen03g005490 Solanum pennellii HOM05D002437 ORTHO05D002831 1.0e-07 62.0 216 26.4
AT4G04610 Arabidopsis thaliana HOM05D002437 ORTHO05D002831 1.4e-07 61.6 126 33.3
QL05p072936 Quercus lobata HOM05D002437 ORTHO05D002831 1.4e-07 61.6 126 31.7
QL08p009538 Quercus lobata HOM05D002437 ORTHO05D002831 1.4e-07 61.6 126 34.1
MSTRG.7201 Avicennia marina HOM05D002437 ORTHO05D002831 1.8e-07 61.2 188 28.2
BcaNung00820 Brassica carinata HOM05D002437 ORTHO05D002831 1.8e-07 61.2 126 32.5
AT1G62180 Arabidopsis thaliana HOM05D002437 ORTHO05D002831 2.3e-07 60.8 288 26.0
Carub.0007s1935 Capsella rubella HOM05D002437 ORTHO05D002831 2.3e-07 60.8 126 32.5
Cre12.g517150 Chlamydomonas reinhardtii HOM05D002437 ORTHO05D002831 2.3e-07 60.8 194 28.4
Sp7g20180 Schrenkiella parvula HOM05D002437 ORTHO05D002831 2.3e-07 60.8 126 32.5
A03p53180 Brassica napus HOM05D002437 ORTHO05D002831 3.0e-07 60.5 126 32.5
C07p51550 Brassica napus HOM05D002437 ORTHO05D002831 3.0e-07 60.5 126 32.5
BolC7t45653H Brassica oleracea HOM05D002437 ORTHO05D002831 3.0e-07 60.5 126 32.5
BraA03t14386Z Brassica rapa HOM05D002437 ORTHO05D002831 3.0e-07 60.5 126 32.5
ECA234G2099 Erigeron canadensis HOM05D002437 ORTHO05D002831 3.0e-07 60.5 126 31.7
Thhalv10025134m.g Eutrema salsugineum HOM05D002437 ORTHO05D002831 3.0e-07 60.5 126 31.7
BraA01t01280Z Brassica rapa HOM05D002437 ORTHO05D002831 5.2e-07 59.7 329 24.0
HanXRQChr15g0470721 Helianthus annuus HOM05D002437 ORTHO05D002831 5.2e-07 59.7 126 32.5
Lsat_1_v5_gn_7_16240 Lactuca sativa HOM05D002437 ORTHO05D002831 6.8e-07 59.3 186 26.9
RhsimUnG0089100 Rhododendron simsii HOM05D002437 ORTHO05D002831 6.8e-07 59.3 327 25.7
HanXRQChr16g0515511 Helianthus annuus HOM05D002437 ORTHO05D002831 8.8e-07 58.9 186 26.9
MCO12G232 Micromonas commoda HOM05D002437 ORTHO05D002831 8.8e-07 58.9 182 28.0
GSVIVG01012712001 Vitis vinifera HOM05D002437 ORTHO05D002831 8.8e-07 58.9 307 24.1
CARHR228800 Cardamine hirsuta HOM05D002437 ORTHO05D002831 1.5e-06 58.2 315 24.8
TWI38G2173 Tripterygium wilfordii HOM05D002437 ORTHO05D002831 1.5e-06 58.2 292 23.3
TAR627G0504 Trochodendron aralioides HOM05D002437 ORTHO05D002831 2.0e-06 57.8 75 38.7
C01p16090 Brassica napus HOM05D002437 ORTHO05D002831 3.4e-06 57.0 307 23.8
BcaC09g51173 Brassica carinata HOM05D002437 ORTHO05D002831 5.7e-06 56.2 331 23.6


User provided reference genes

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