Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa023998 Carpinus fangiana HOM05D004704 ORTHO05D005384 2.1e-100 369.0 182 100.0
Pp3c12_12860 Physcomitrium patens HOM05D004704 ORTHO05D005384 1.7e-25 120.2 183 38.3
Os01g0613100 Oryza sativa ssp. japonica HOM05D004704 ORTHO05D005384 3.9e-22 109.0 188 36.2
CAN.G2115.3 Capsicum annuum HOM05D004704 ORTHO05D005384 3.3e-21 105.9 180 34.4
Eucgr.D00531 Eucalyptus grandis HOM05D004704 ORTHO05D005384 1.3e-20 104.0 180 33.3
Peaxi162Scf00200g00121 Petunia axillaris HOM05D004704 ORTHO05D005384 1.3e-20 104.0 180 33.9
PGSC0003DMG400004386 Solanum tuberosum HOM05D004704 ORTHO05D005384 1.3e-20 104.0 180 33.9
BcaNung03810 Brassica carinata HOM05D004704 ORTHO05D005384 2.1e-20 103.2 181 31.5
ECA236G1293 Erigeron canadensis HOM05D004704 ORTHO05D005384 2.8e-20 102.8 180 32.2
TAR629G2609 Trochodendron aralioides HOM05D004704 ORTHO05D005384 2.8e-20 102.8 180 31.7
Lsat_1_v5_gn_7_23201 Lactuca sativa HOM05D004704 ORTHO05D005384 3.6e-20 102.4 180 31.7
Sopen03g002240 Solanum pennellii HOM05D004704 ORTHO05D005384 3.6e-20 102.4 180 33.3
Nitab4.5_0002076g0080 Nicotiana tabacum HOM05D004704 ORTHO05D005384 4.8e-20 102.1 180 32.2
PGR004G2343 Punica granatum HOM05D004704 ORTHO05D005384 4.8e-20 102.1 180 33.3
DCAR_028021 Daucus carota HOM05D004704 ORTHO05D005384 6.2e-20 101.7 180 34.4
HanXRQChr04g0115831 Helianthus annuus HOM05D004704 ORTHO05D005384 6.2e-20 101.7 180 31.7
PGR004G2271 Punica granatum HOM05D004704 ORTHO05D005384 6.2e-20 101.7 180 33.3
DCAR_004020 Daucus carota HOM05D004704 ORTHO05D005384 8.1e-20 101.3 180 33.9
Thhalv10023013m.g Eutrema salsugineum HOM05D004704 ORTHO05D005384 8.1e-20 101.3 181 30.9
Solyc03g006230.1 Solanum lycopersicum HOM05D004704 ORTHO05D005384 8.1e-20 101.3 180 32.8
PGSC0003DMG400018011 Solanum tuberosum HOM05D004704 ORTHO05D005384 8.1e-20 101.3 180 32.8
Aqoxy1G03204 Aquilegia oxysepala HOM05D004704 ORTHO05D005384 1.1e-19 100.9 180 33.3
DCAR_004019 Daucus carota HOM05D004704 ORTHO05D005384 1.1e-19 100.9 180 33.9
CsaV3_6G050770 Cucumis sativus L. HOM05D004704 ORTHO05D005384 1.4e-19 100.5 180 31.7
TWI38G0698 Tripterygium wilfordii HOM05D004704 ORTHO05D005384 1.4e-19 100.5 180 32.8
unitig_578.g16444 Utricularia gibba HOM05D004704 ORTHO05D005384 1.4e-19 100.5 179 32.4
BcaC09g51493 Brassica carinata HOM05D004704 ORTHO05D005384 1.8e-19 100.1 181 30.9
BolC1t01223H Brassica oleracea HOM05D004704 ORTHO05D005384 1.8e-19 100.1 181 30.9
Eucgr.D00532 Eucalyptus grandis HOM05D004704 ORTHO05D005384 1.8e-19 100.1 180 33.3
Gohir.D06G134300 Gossypium hirsutum HOM05D004704 ORTHO05D005384 1.8e-19 100.1 180 32.8
Gorai.010G156000 Gossypium raimondii HOM05D004704 ORTHO05D005384 1.8e-19 100.1 180 32.8
TAR629G2327 Trochodendron aralioides HOM05D004704 ORTHO05D005384 1.8e-19 100.1 180 31.1
A01p10560 Brassica napus HOM05D004704 ORTHO05D005384 2.4e-19 99.8 181 30.9
BraA01t01002Z Brassica rapa HOM05D004704 ORTHO05D005384 2.4e-19 99.8 181 30.9
Glyma.13G231200 Glycine max HOM05D004704 ORTHO05D005384 2.4e-19 99.8 180 32.8
PSO782G0987 Papaver somniferum HOM05D004704 ORTHO05D005384 2.4e-19 99.8 180 32.8
AL7G35740 Arabidopsis lyrata HOM05D004704 ORTHO05D005384 3.1e-19 99.4 181 30.4
BcaC01g00546 Brassica carinata HOM05D004704 ORTHO05D005384 3.1e-19 99.4 181 30.4
BcaNung03813 Brassica carinata HOM05D004704 ORTHO05D005384 3.1e-19 99.4 181 30.4
C01p12500 Brassica napus HOM05D004704 ORTHO05D005384 3.1e-19 99.4 181 30.4
BolC3t20394H Brassica oleracea HOM05D004704 ORTHO05D005384 3.1e-19 99.4 181 30.4
Sabra04G0035600 Salix brachista HOM05D004704 ORTHO05D005384 3.1e-19 99.4 180 32.8
Zm00001eb161990 Zea mays HOM05D004704 ORTHO05D005384 3.1e-19 99.4 182 31.3
A08p13850 Brassica napus HOM05D004704 ORTHO05D005384 4.0e-19 99.0 181 30.4
CARHR225390 Cardamine hirsuta HOM05D004704 ORTHO05D005384 4.0e-19 99.0 181 30.4
PSO063G2883 Papaver somniferum HOM05D004704 ORTHO05D005384 4.0e-19 99.0 180 31.7
BraA08t33364Z Brassica rapa HOM05D004704 ORTHO05D005384 5.3e-19 98.6 181 30.4
Dinv04632 Davidia involucrata HOM05D004704 ORTHO05D005384 5.3e-19 98.6 181 30.9
QL05p046090 Quercus lobata HOM05D004704 ORTHO05D005384 5.3e-19 98.6 179 31.8
DCAR_013058 Daucus carota HOM05D004704 ORTHO05D005384 6.9e-19 98.2 180 31.1
Cc02_g14600 Coffea canephora HOM05D004704 ORTHO05D005384 9.0e-19 97.8 180 32.8
Nn1g04361 Nelumbo nucifera HOM05D004704 ORTHO05D005384 9.0e-19 97.8 180 31.7
Sp7g15490 Schrenkiella parvula HOM05D004704 ORTHO05D005384 9.0e-19 97.8 181 29.8
arahy.Tifrunner.gnm1.ann1.IMTX5S Arachis hypogaea HOM05D004704 ORTHO05D005384 1.2e-18 97.4 180 31.7
COL.COLO4_31331 Corchorus olitorius HOM05D004704 ORTHO05D005384 1.2e-18 97.4 180 31.7
Thhalv10024794m.g Eutrema salsugineum HOM05D004704 ORTHO05D005384 1.2e-18 97.4 181 29.8
Rhsim13G0106100 Rhododendron simsii HOM05D004704 ORTHO05D005384 1.2e-18 97.4 180 32.8
arahy.Tifrunner.gnm1.ann1.7UF87C Arachis hypogaea HOM05D004704 ORTHO05D005384 1.5e-18 97.1 180 31.7
MELO3C007223.2 Cucumis melo HOM05D004704 ORTHO05D005384 1.5e-18 97.1 180 31.1
SGA_v2.0_scaffold1G00021 Striga asiatica HOM05D004704 ORTHO05D005384 1.5e-18 97.1 181 31.5
BcaB04g18480 Brassica carinata HOM05D004704 ORTHO05D005384 2.0e-18 96.7 181 29.8
ClCG01G023620 Citrullus lanatus HOM05D004704 ORTHO05D005384 2.0e-18 96.7 180 31.1
Manes.17G053800 Manihot esculenta HOM05D004704 ORTHO05D005384 2.0e-18 96.7 180 30.6
Potri.011G064300 Populus trichocarpa HOM05D004704 ORTHO05D005384 2.0e-18 96.7 180 32.2
Sed0013784 Sechium edule HOM05D004704 ORTHO05D005384 2.0e-18 96.7 180 31.7
Aqoxy4G00469 Aquilegia oxysepala HOM05D004704 ORTHO05D005384 2.6e-18 96.3 180 30.6
BcaC06g30574 Brassica carinata HOM05D004704 ORTHO05D005384 2.6e-18 96.3 181 29.3
BcaNung02719 Brassica carinata HOM05D004704 ORTHO05D005384 2.6e-18 96.3 181 29.3
A03p51400 Brassica napus HOM05D004704 ORTHO05D005384 2.6e-18 96.3 181 29.3
C07p49820 Brassica napus HOM05D004704 ORTHO05D005384 2.6e-18 96.3 181 29.3
BolC7t45484H Brassica oleracea HOM05D004704 ORTHO05D005384 2.6e-18 96.3 181 29.3
Cfa000584 Carpinus fangiana HOM05D004704 ORTHO05D005384 2.6e-18 96.3 180 31.7
CiPaw.09G067800 Carya illinoinensis HOM05D004704 ORTHO05D005384 2.6e-18 96.3 180 32.2
CiPaw.09G067900 Carya illinoinensis HOM05D004704 ORTHO05D005384 3.4e-18 95.9 180 31.1
Duzib192G0914 Durio zibethinus HOM05D004704 ORTHO05D005384 3.4e-18 95.9 180 31.7
Medtr2g091155 Medicago truncatula HOM05D004704 ORTHO05D005384 3.4e-18 95.9 180 30.0
Sabra11G0046100 Salix brachista HOM05D004704 ORTHO05D005384 3.4e-18 95.9 180 31.1
TAR627G0020 Trochodendron aralioides HOM05D004704 ORTHO05D005384 3.4e-18 95.9 180 30.6
TAR706G0003 Trochodendron aralioides HOM05D004704 ORTHO05D005384 3.4e-18 95.9 180 30.6
Aa31LG6G1280 Aethionema arabicum HOM05D004704 ORTHO05D005384 4.5e-18 95.5 181 29.3
Oeu041804.1 Olea europaea HOM05D004704 ORTHO05D005384 4.5e-18 95.5 180 31.7
SalBow8G4518 Salvia bowleyana HOM05D004704 ORTHO05D005384 4.5e-18 95.5 180 32.2
ATR0602G038 Amborella trichopoda HOM05D004704 ORTHO05D005384 5.8e-18 95.1 180 31.1
QL04p061454 Quercus lobata HOM05D004704 ORTHO05D005384 5.8e-18 95.1 179 31.3
Sabra11G0045900 Salix brachista HOM05D004704 ORTHO05D005384 5.8e-18 95.1 180 31.1
SalBow8G1161 Salvia bowleyana HOM05D004704 ORTHO05D005384 5.8e-18 95.1 180 32.2
Aqoxy4G00468 Aquilegia oxysepala HOM05D004704 ORTHO05D005384 7.6e-18 94.7 180 31.1
MBI06_g18005_MAGBIO Magnolia biondii HOM05D004704 ORTHO05D005384 7.6e-18 94.7 180 31.1
MBI06_g18007_MAGBIO Magnolia biondii HOM05D004704 ORTHO05D005384 7.6e-18 94.7 180 30.6
MBI06_g45390_MAGBIO Magnolia biondii HOM05D004704 ORTHO05D005384 7.6e-18 94.7 180 30.6
SGA_v2.0_scaffold1G00019 Striga asiatica HOM05D004704 ORTHO05D005384 7.6e-18 94.7 181 30.9
Thecc.06G174000 Theobroma cacao HOM05D004704 ORTHO05D005384 7.6e-18 94.7 180 31.1
TAR627G1005 Trochodendron aralioides HOM05D004704 ORTHO05D005384 7.6e-18 94.7 180 30.6
Carub.0007s2269 Capsella rubella HOM05D004704 ORTHO05D005384 1.3e-17 94.0 181 29.3
Migut.M01052 Erythranthe guttata HOM05D004704 ORTHO05D005384 1.3e-17 94.0 180 31.1
Psat5g275720 Pisum sativum HOM05D004704 ORTHO05D005384 1.3e-17 94.0 180 29.4
Medtr2g091165 Medicago truncatula HOM05D004704 ORTHO05D005384 1.7e-17 93.6 180 30.0
Lj1P1195T10 Lonicera japonica HOM05D004704 ORTHO05D005384 2.2e-17 93.2 180 31.1
QL05p045074 Quercus lobata HOM05D004704 ORTHO05D005384 2.2e-17 93.2 182 30.2
Potri.004G054500 Populus trichocarpa HOM05D004704 ORTHO05D005384 2.9e-17 92.8 180 31.1
TPR.G11553 Trifolium pratense HOM05D004704 ORTHO05D005384 3.8e-17 92.4 180 28.9
Lj3g0017096 Lotus japonicus HOM05D004704 ORTHO05D005384 4.9e-17 92.0 180 28.9
Manes.17G053900 Manihot esculenta HOM05D004704 ORTHO05D005384 4.9e-17 92.0 180 31.7
Glyma.12G209400 Glycine max HOM05D004704 ORTHO05D005384 6.4e-17 91.7 180 28.9
PSO063G6793 Papaver somniferum HOM05D004704 ORTHO05D005384 8.4e-17 91.3 181 32.0
Glyma.13G291900 Glycine max HOM05D004704 ORTHO05D005384 1.1e-16 90.9 180 28.3
Ca_01465_v3 Cicer arietinum L. HOM05D004704 ORTHO05D005384 2.4e-16 89.7 180 29.4
VMungo1080G1587 Vigna mungo HOM05D004704 ORTHO05D005384 2.4e-16 89.7 180 28.3
Phvul.005G096400 Phaseolus vulgaris HOM05D004704 ORTHO05D005384 5.4e-16 88.6 180 28.9
Lalb_Chr20g0121271 Lupinus albus HOM05D004704 ORTHO05D005384 7.1e-16 88.2 180 30.6
Lalb_Chr14g0367381 Lupinus albus HOM05D004704 ORTHO05D005384 1.2e-15 87.4 181 28.7
Rhsim13G0106000 Rhododendron simsii HOM05D004704 ORTHO05D005384 2.1e-15 86.7 180 30.0
SGA_v2.0_scaffold1G00026 Striga asiatica HOM05D004704 ORTHO05D005384 3.5e-15 85.9 171 30.4
Lalb_Chr24g0400061 Lupinus albus HOM05D004704 ORTHO05D005384 6.0e-15 85.1 181 28.7
Nitab4.5_0001375g0020 Nicotiana tabacum HOM05D004704 ORTHO05D005384 7.9e-15 84.7 179 29.6
TAR627G1161 Trochodendron aralioides HOM05D004704 ORTHO05D005384 3.0e-14 82.8 154 31.8
BcaC09g51492 Brassica carinata HOM05D004704 ORTHO05D005384 8.7e-14 81.3 193 26.4
Pp3c12_12910 Physcomitrium patens HOM05D004704 ORTHO05D005384 2.5e-13 79.7 119 38.7
C03p81280 Brassica napus HOM05D004704 ORTHO05D005384 4.3e-13 79.0 134 30.6
CSS0042475 Camellia sinensis var. sinensis HOM05D004704 ORTHO05D005384 7.4e-13 78.2 179 29.1
GSVIVG01021186001 Vitis vinifera HOM05D004704 ORTHO05D000303 1.6e-12 77.0 179 28.5
Aqoxy1G03203 Aquilegia oxysepala HOM05D004704 ORTHO05D005384 2.1e-12 76.6 133 33.1
BraA03t14222Z Brassica rapa HOM05D004704 ORTHO05D005384 1.8e-11 73.6 181 24.9
Rhsim13G0186500 Rhododendron simsii HOM05D004704 ORTHO05D005384 5.3e-11 72.0 163 29.4
CDE02G3156 Ceratophyllum demersum HOM05D004704 ORTHO05D005384 2.0e-10 70.1 137 30.7
CSS0042208 Camellia sinensis var. sinensis HOM05D004704 ORTHO05D005384 1.8e-06 57.0 137 27.0
SMO351G0588 Selaginella moellendorffii HOM05D020388 ORTHO05D005384 1.8e-06 57.0 116 34.5


User provided reference genes

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