Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa023972 Carpinus fangiana HOM05D007146 ORTHO05D008971 0.0e+00 1223.0 618 100.0
HanXRQChr05g0160631 Helianthus annuus HOM05D007146 ORTHO05D008971 2.7e-14 84.7 302 24.8
DCAR_009636 Daucus carota HOM05D007146 ORTHO05D008971 5.9e-14 83.6 388 23.2
Lj3g0000430 Lotus japonicus HOM05D007146 ORTHO05D008971 1.7e-13 82.0 343 23.9
AagrBONN_evm.TU.Sc2ySwM_368.537 Anthoceros agrestis HOM05D007146 ORTHO05D008971 3.9e-13 80.9 309 27.8
FvH4_3g16020 Fragaria vesca HOM05D007146 ORTHO05D008971 5.0e-13 80.5 359 23.1
Glyma.08G173200 Glycine max HOM05D007146 ORTHO05D008971 6.6e-13 80.1 343 23.9
GSVIVG01020477001 Vitis vinifera HOM05D007146 ORTHO05D008971 6.6e-13 80.1 314 25.5
Gorai.004G269700 Gossypium raimondii HOM05D007146 ORTHO05D008971 8.6e-13 79.7 331 24.8
Medtr2g064450 Medicago truncatula HOM05D007146 ORTHO05D008971 1.1e-12 79.3 377 26.0
Peaxi162Scf00232g01133 Petunia axillaris HOM05D007146 ORTHO05D008971 1.1e-12 79.3 324 23.5
FAN25G2803 Fragaria x ananassa HOM05D007146 ORTHO05D008971 1.5e-12 79.0 359 23.1
Lalb_Chr25g0285151 Lupinus albus HOM05D007146 ORTHO05D008971 1.9e-12 78.6 324 24.7
FAN11G2635 Fragaria x ananassa HOM05D007146 ORTHO05D008971 2.5e-12 78.2 359 22.8
Eucgr.F01450 Eucalyptus grandis HOM05D007146 ORTHO05D008971 3.3e-12 77.8 317 23.7
Lsat_1_v5_gn_9_46800 Lactuca sativa HOM05D007146 ORTHO05D008971 4.3e-12 77.4 290 24.8
THA.LOC104812351 Tarenaya hassleriana HOM05D007146 ORTHO05D008971 4.3e-12 77.4 307 26.1
CSS0042492 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 7.3e-12 76.6 332 23.5
PGR083G2275 Punica granatum HOM05D007146 ORTHO05D008971 1.2e-11 75.9 310 23.5
RcHm_v2.0_Chr5g0027001 Rosa chinensis HOM05D007146 ORTHO05D008971 1.6e-11 75.5 374 23.5
SalBow8G2846 Salvia bowleyana HOM05D007146 ORTHO05D008971 1.6e-11 75.5 356 25.0
SGA_v2.0_scaffold186G40227 Striga asiatica HOM05D007146 ORTHO05D008971 2.1e-11 75.1 328 22.9
TPR.G9764 Trifolium pratense HOM05D007146 ORTHO05D008971 2.1e-11 75.1 316 25.0
PGSC0003DMG401022133 Solanum tuberosum HOM05D007146 ORTHO05D008971 2.8e-11 74.7 316 23.1
HPP92_018676 Vanilla planifolia HOM05D007146 ORTHO05D008971 2.8e-11 74.7 314 24.8
COL.COLO4_05069 Corchorus olitorius HOM05D007146 ORTHO05D008971 4.7e-11 73.9 335 23.9
CsaV3_2G022170 Cucumis sativus L. HOM05D007146 ORTHO05D008971 6.1e-11 73.6 311 25.1
ClCG11G016310 Citrullus lanatus HOM05D007146 ORTHO05D008971 1.4e-10 72.4 346 25.7
Pp3c14_6050 Physcomitrium patens HOM05D007146 ORTHO05D008971 1.4e-10 72.4 176 31.2
Phvul.005G055600 Phaseolus vulgaris HOM05D007146 ORTHO05D008971 1.8e-10 72.0 327 24.5
Rhsim06G0237700 Rhododendron simsii HOM05D007146 ORTHO05D008971 1.8e-10 72.0 386 23.3
SMO143G0033 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 2.3e-10 71.6 295 23.7
Os12g0610500 Oryza sativa ssp. japonica HOM05D007146 ORTHO05D008971 3.1e-10 71.2 378 24.3
Potri.007G065300 Populus trichocarpa HOM05D007146 ORTHO05D008971 3.1e-10 71.2 330 23.6
Sp1g14790 Schrenkiella parvula HOM05D007146 ORTHO05D008971 3.1e-10 71.2 301 22.3
CAN.G943.29 Capsicum annuum HOM05D007146 ORTHO05D008971 5.2e-10 70.5 320 21.9
Cc05_g15970 Coffea canephora HOM05D007146 ORTHO05D008971 5.2e-10 70.5 332 21.7
MD05G1215600 Malus domestica HOM05D007146 ORTHO05D008971 8.9e-10 69.7 327 23.2
Zm00001eb135900 Zea mays HOM05D007146 ORTHO05D008971 8.9e-10 69.7 358 21.8
A06p12640 Brassica napus HOM05D007146 ORTHO05D008971 1.2e-09 69.3 292 23.6
EL10Ac4g08556 Beta vulgaris HOM05D007146 ORTHO05D008971 1.5e-09 68.9 304 24.0
CiPaw.11G069000 Carya illinoinensis HOM05D007146 ORTHO05D008971 1.5e-09 68.9 338 23.1
Thhalv10007372m.g Eutrema salsugineum HOM05D007146 ORTHO05D008971 1.5e-09 68.9 299 23.7
Sabra07G0052900 Salix brachista HOM05D007146 ORTHO05D008971 2.6e-09 68.2 326 23.0
TWI38G0129 Tripterygium wilfordii HOM05D007146 ORTHO05D008971 2.6e-09 68.2 179 26.8
AT1G16650 Arabidopsis thaliana HOM05D007146 ORTHO05D008971 3.4e-09 67.8 323 21.4
BcaC05g25529 Brassica carinata HOM05D007146 ORTHO05D008971 3.4e-09 67.8 288 23.3
C05p14940 Brassica napus HOM05D007146 ORTHO05D008971 3.4e-09 67.8 288 23.3
BolC5t30209H Brassica oleracea HOM05D007146 ORTHO05D008971 3.4e-09 67.8 288 23.3
Sopen07g034520 Solanum pennellii HOM05D007146 ORTHO05D008971 3.4e-09 67.8 319 22.3
Sed0009835 Sechium edule HOM05D007146 ORTHO05D008971 5.8e-09 67.0 316 25.0
HPP92_018693 Vanilla planifolia HOM05D007146 ORTHO05D008971 5.8e-09 67.0 337 23.7
TAR627G0841 Trochodendron aralioides HOM05D007146 ORTHO05D008971 7.5e-09 66.6 323 24.8
MELO3C010557.2 Cucumis melo HOM05D007146 ORTHO05D008971 9.8e-09 66.2 319 23.2
Aa31LG7G1140 Aethionema arabicum HOM05D007146 ORTHO05D008971 1.3e-08 65.9 300 23.3
AL1G28820 Arabidopsis lyrata HOM05D007146 ORTHO05D008971 1.3e-08 65.9 298 22.5
BraA06t24425Z Brassica rapa HOM05D007146 ORTHO05D008971 1.3e-08 65.9 292 22.9
Solyc07g066340.3 Solanum lycopersicum HOM05D007146 ORTHO05D008971 1.7e-08 65.5 316 21.8
vmacro11655 Vaccinium macrocarpon HOM05D007146 ORTHO05D008971 1.7e-08 65.5 170 30.6
FAN21G1125 Fragaria x ananassa HOM05D007146 ORTHO05D008971 2.2e-08 65.1 151 28.5
arahy.Tifrunner.gnm1.ann1.L14HV7 Arachis hypogaea HOM05D007146 ORTHO05D008971 2.9e-08 64.7 365 21.9
CSS0033590 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 2.9e-08 64.7 611 21.9
PSO541G2405 Papaver somniferum HOM05D007146 ORTHO05D008971 3.7e-08 64.3 151 27.8
ATR1098G072 Amborella trichopoda HOM05D007146 ORTHO05D008971 1.1e-07 62.8 332 22.6
Carub.0001s1639 Capsella rubella HOM05D007146 ORTHO05D008971 1.1e-07 62.8 297 21.5
Pp3c1_21800 Physcomitrium patens HOM05D007146 ORTHO05D008971 1.1e-07 62.8 207 27.5
Nn7g37748 Nelumbo nucifera HOM05D007146 ORTHO05D008971 1.9e-07 62.0 135 29.6
PSO675G2245 Papaver somniferum HOM05D007146 ORTHO05D008971 2.4e-07 61.6 154 27.9
Aqoxy4G00043_Aqoxy4G00044 Aquilegia oxysepala HOM05D007146 ORTHO05D008971 4.1e-07 60.8 409 22.0
Prupe.4G143400 Prunus persica HOM05D007146 ORTHO05D008971 5.4e-07 60.5 356 20.8
Psat1g002520 Pisum sativum HOM05D007146 ORTHO05D008971 1.6e-06 58.9 184 29.9
Gohir.D08G252900 Gossypium hirsutum HOM05D007146 ORTHO05D008971 3.5e-06 57.8 134 29.1
VMungo1080G0158 Vigna mungo HOM05D007146 ORTHO05D008971 3.5e-06 57.8 161 28.0
Atru.chr2.1879 Acer truncatum HOM05D007146 ORTHO05D008971 6.0e-06 57.0 148 26.4


User provided reference genes

Program Settings