Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa023924 Carpinus fangiana HOM05D005365 ORTHO05D006910 0.0e+00 2057.7 1118 100.0
PRCOL_00005851 Prasinoderma coloniale HOM05D005365 ORTHO05D006910 2.3e-24 119.0 327 30.6
SMO367G0263 Selaginella moellendorffii HOM05D005365 ORTHO05D006910 3.9e-24 118.2 800 21.0
CBR_g39392 Chara braunii HOM05D000019 ORTHO05D000048 3.1e-21 108.6 252 30.2
Mapoly0032s0119 Marchantia polymorpha HOM05D005365 ORTHO05D006910 1.2e-20 106.7 923 21.2
CsaV3_5G023940 Cucumis sativus L. HOM05D005365 ORTHO05D006910 2.0e-20 105.9 806 22.7
Sabra04G0056600 Salix brachista HOM05D005365 ORTHO05D006910 2.6e-20 105.5 683 21.7
ClCG03G008820 Citrullus lanatus HOM05D005365 ORTHO05D006910 7.7e-20 104.0 800 21.6
Sed0006074 Sechium edule HOM05D005365 ORTHO05D006910 5.0e-19 101.3 678 22.4
Gorai.007G187500 Gossypium raimondii HOM05D005365 ORTHO05D006910 6.5e-19 100.9 832 20.4
CSS0031268 Camellia sinensis var. sinensis HOM05D005365 ORTHO05D006910 1.9e-18 99.4 617 22.9
Eucgr.F02871 Eucalyptus grandis HOM05D005365 ORTHO05D006910 5.5e-18 97.8 760 22.5
Pp3c22_14670 Physcomitrium patens HOM05D005365 ORTHO05D006910 5.5e-18 97.8 776 20.7
CSS0046739 Camellia sinensis var. sinensis HOM05D005365 ORTHO05D006910 7.2e-18 97.4 613 23.3
Gohir.D11G174900 Gossypium hirsutum HOM05D005365 ORTHO05D006910 7.2e-18 97.4 832 20.3
PSO017G3744 Papaver somniferum HOM05D005365 ORTHO05D006910 1.2e-17 96.7 652 21.5
Ah.10g032430 Amaranthus hybridus HOM05D005365 ORTHO05D006910 1.6e-17 96.3 745 22.1
MELO3C022831.2 Cucumis melo HOM05D005365 ORTHO05D006910 1.6e-17 96.3 727 22.1
Sc11g0004580 Simmondsia chinensis HOM05D005365 ORTHO05D006910 2.7e-17 95.5 786 20.9
MSTRG.15661 Avicennia marina HOM05D005365 ORTHO05D006910 3.6e-17 95.1 796 21.5
CDE05G1264 Ceratophyllum demersum HOM05D005365 ORTHO05D006910 4.7e-17 94.7 726 21.2
Nn4g24353 Nelumbo nucifera HOM05D005365 ORTHO05D006910 6.1e-17 94.4 772 21.6
MCO13G329 Micromonas commoda HOM05D005365 ORTHO05D006910 8.0e-17 94.0 978 21.9
Gohir.A11G168700 Gossypium hirsutum HOM05D005365 ORTHO05D006910 1.0e-16 93.6 656 21.8
Zm00001eb379890 Zea mays HOM05D005365 ORTHO05D006910 1.0e-16 93.6 315 27.3
COL.COLO4_13431 Corchorus olitorius HOM05D005365 ORTHO05D006910 1.4e-16 93.2 482 22.4
Aa31LG9G17470 Aethionema arabicum HOM05D005365 ORTHO05D006910 1.8e-16 92.8 251 27.5
Ciclev10010965m.g Citrus clementina HOM05D005365 ORTHO05D006910 3.9e-16 91.7 266 26.3
Thhalv10027629m.g Eutrema salsugineum HOM05D005365 ORTHO05D006910 6.7e-16 90.9 281 26.7
Psat5g120520 Pisum sativum HOM05D005365 ORTHO05D006910 6.7e-16 90.9 294 25.2
QL02p059099 Quercus lobata HOM05D005365 ORTHO05D006910 8.8e-16 90.5 265 26.8
TWI77G0914 Tripterygium wilfordii HOM05D005365 ORTHO05D006910 1.5e-15 89.7 666 22.4
PSO478G2448 Papaver somniferum HOM05D005365 ORTHO05D006910 2.0e-15 89.4 807 20.0
Potri.004G085500 Populus trichocarpa HOM05D005365 ORTHO05D006910 2.0e-15 89.4 820 21.2
SEGI_18021 Sequoiadendron giganteum HOM05D005365 ORTHO05D006910 2.6e-15 89.0 279 27.6
vmacro07709 Vaccinium macrocarpon HOM05D005365 ORTHO05D006910 2.6e-15 89.0 689 20.5
Atru.chr1.1986 Acer truncatum HOM05D005365 ORTHO05D006910 3.3e-15 88.6 759 22.0
Hund13093 Selenicereus undatus HOM05D005365 ORTHO05D006910 3.3e-15 88.6 621 21.3
Ca_17092_v3 Cicer arietinum L. HOM05D005365 ORTHO05D006910 5.7e-15 87.8 294 25.9
Ca_17099_v3 Cicer arietinum L. HOM05D005365 ORTHO05D006910 5.7e-15 87.8 294 25.9
Solyc11g011370.2 Solanum lycopersicum HOM05D005365 ORTHO05D006910 5.7e-15 87.8 683 20.5
BcaB06g27110 Brassica carinata HOM05D005365 ORTHO05D006910 9.7e-15 87.0 274 27.4
Duzib133G0311 Durio zibethinus HOM05D005365 ORTHO05D006910 9.7e-15 87.0 811 21.0
Sopen11g006160 Solanum pennellii HOM05D005365 ORTHO05D006910 9.7e-15 87.0 683 20.5
CiPaw.03G073200 Carya illinoinensis HOM05D005365 ORTHO05D006910 1.3e-14 86.7 264 27.7
C04p44500 Brassica napus HOM05D005365 ORTHO05D006910 1.7e-14 86.3 241 28.6
Haze_14277 Corylus avellana HOM05D005365 ORTHO05D006910 1.7e-14 86.3 266 27.1
Lsat_1_v5_gn_2_68700 Lactuca sativa HOM05D005365 ORTHO05D006910 1.7e-14 86.3 810 19.9
THA.LOC104805627 Tarenaya hassleriana HOM05D005365 ORTHO05D006910 1.7e-14 86.3 727 21.2
BcaC02g09592 Brassica carinata HOM05D005365 ORTHO05D006910 2.2e-14 85.9 241 28.6
BolC4t26020H Brassica oleracea HOM05D005365 ORTHO05D006910 2.2e-14 85.9 241 28.6
Thecc.04G055200 Theobroma cacao HOM05D005365 ORTHO05D006910 2.8e-14 85.5 793 20.7
AL7G46400 Arabidopsis lyrata HOM05D005365 ORTHO05D006910 4.8e-14 84.7 321 23.7
Sp7g04480 Schrenkiella parvula HOM05D005365 ORTHO05D006910 4.8e-14 84.7 241 29.0
A04p10780 Brassica napus HOM05D005365 ORTHO05D006910 6.3e-14 84.3 228 28.5
BraA04t16742Z Brassica rapa HOM05D005365 ORTHO05D006910 6.3e-14 84.3 228 28.5
Carub.0007s3279 Capsella rubella HOM05D005365 ORTHO05D006910 6.3e-14 84.3 319 23.2
AT5G37630 Arabidopsis thaliana HOM05D005365 ORTHO05D006910 8.2e-14 84.0 306 23.5
AagrBONN_evm.TU.Sc2ySwM_228.4009 Anthoceros agrestis HOM05D005365 ORTHO05D006910 1.1e-13 83.6 749 21.2
CARHR215230 Cardamine hirsuta HOM05D005365 ORTHO05D006910 1.1e-13 83.6 317 22.7
AUR62018225 Chenopodium quinoa HOM05D005365 ORTHO05D006910 1.1e-13 83.6 620 22.7
Dinv28185 Davidia involucrata HOM05D005365 ORTHO05D006910 1.1e-13 83.6 264 26.5
Lj2C520T1 Lonicera japonica HOM05D005365 ORTHO05D006910 1.1e-13 83.6 756 22.0
PGR004G1341 Punica granatum HOM05D005365 ORTHO05D006910 1.4e-13 83.2 749 21.2
Medtr3g065300 Medicago truncatula HOM05D005365 ORTHO05D006910 1.8e-13 82.8 240 28.3
FvH4_1g30230 Fragaria vesca HOM05D005365 ORTHO05D006910 2.4e-13 82.4 608 21.2
RcHm_v2.0_Chr3g0491161 Rosa chinensis HOM05D005365 ORTHO05D006910 3.1e-13 82.0 608 21.2
Cc07_g13300 Coffea canephora HOM05D005365 ORTHO05D006910 4.1e-13 81.6 654 21.6
FAN26G1336 Fragaria x ananassa HOM05D005365 ORTHO05D006910 5.3e-13 81.3 600 20.5
Glyma.18G041000 Glycine max HOM05D005365 ORTHO05D006910 5.3e-13 81.3 620 20.8
Prupe.3G017700 Prunus persica HOM05D005365 ORTHO05D006910 5.3e-13 81.3 659 21.4
EL10Ac2g03189 Beta vulgaris HOM05D005365 ORTHO05D006910 7.0e-13 80.9 761 21.2
VMungo1383G2900 Vigna mungo HOM05D005365 ORTHO05D006910 9.1e-13 80.5 266 26.3
MD09G1270700 Malus domestica HOM05D005365 ORTHO05D006910 1.2e-12 80.1 333 24.3
Manes.03G027200 Manihot esculenta HOM05D005365 ORTHO05D006910 1.2e-12 80.1 814 19.4
Nitab4.5_0000201g0010 Nicotiana tabacum HOM05D005365 ORTHO05D006910 1.6e-12 79.7 330 23.0
ATR0753G168 Amborella trichopoda HOM05D005365 ORTHO05D006910 2.6e-12 79.0 189 28.0
Phvul.001G229600 Phaseolus vulgaris HOM05D005365 ORTHO05D006910 2.6e-12 79.0 549 22.0
Actinidia06487 Actinidia chinensis HOM05D005365 ORTHO05D006910 4.5e-12 78.2 687 21.7
unitig_0.g2645 Utricularia gibba HOM05D005365 ORTHO05D006910 4.5e-12 78.2 327 24.5
Lj6g0003323 Lotus japonicus HOM05D005365 ORTHO05D006910 5.9e-12 77.8 622 20.7
Cfa007794 Carpinus fangiana HOM05D005365 ORTHO05D006910 7.7e-12 77.4 739 21.5
FAN23G0266 Fragaria x ananassa HOM05D005365 ORTHO05D006910 7.7e-12 77.4 599 20.7
Cpa.g.sc116.71 Carica papaya HOM05D005365 ORTHO05D006910 1.0e-11 77.0 770 20.1
arahy.Tifrunner.gnm1.ann1.WJY350 Arachis hypogaea HOM05D005365 ORTHO05D006910 1.3e-11 76.6 266 24.4
ECA238G2923 Erigeron canadensis HOM05D005365 ORTHO05D006910 1.3e-11 76.6 621 20.3
Nitab4.5_0012785g0010 Nicotiana tabacum HOM05D005365 ORTHO05D006910 1.3e-11 76.6 330 23.0
arahy.Tifrunner.gnm1.ann1.MH7SY7 Arachis hypogaea HOM05D005365 ORTHO05D006910 1.7e-11 76.3 266 24.1
Dinv19044 Davidia involucrata HOM05D005365 ORTHO05D006910 2.2e-11 75.9 298 23.5
Lalb_Chr15g0084951 Lupinus albus HOM05D005365 ORTHO05D006910 2.2e-11 75.9 749 20.6
GSVIVG01014028001 Vitis vinifera HOM05D005365 ORTHO05D006910 2.2e-11 75.9 672 20.5
CAN.G222.54 Capsicum annuum HOM05D005365 ORTHO05D006910 2.9e-11 75.5 691 20.0
Migut.K00918 Erythranthe guttata HOM05D005365 ORTHO05D006910 5.0e-11 74.7 797 21.0
CANSAT80G2352 Cannabis sativa HOM05D005365 ORTHO05D006910 6.5e-11 74.3 265 26.4
AUR62037789 Chenopodium quinoa HOM05D005365 ORTHO05D006910 8.5e-11 73.9 749 21.4
SGA_v2.0_scaffold45G17160 Striga asiatica HOM05D005365 ORTHO05D006910 1.5e-10 73.2 342 22.8
Glyma.11G215600 Glycine max HOM05D005365 ORTHO05D006910 4.2e-10 71.6 748 21.3
Hma1.2p1_1583F.1_g291990 Hydrangea macrophylla HOM05D005365 ORTHO05D006910 7.2e-10 70.9 994 21.0
MBI19_g22067_MAGBIO Magnolia biondii HOM05D005365 ORTHO05D006910 2.1e-09 69.3 166 30.1
DCAR_028454 Daucus carota HOM05D005365 ORTHO05D006910 2.7e-09 68.9 592 22.3
GSVIVG01038362001 Vitis vinifera HOM05D005365 ORTHO05D006910 4.4e-07 61.6 181 28.7
Oeu012494.1 Olea europaea HOM05D005365 ORTHO05D006910 2.2e-06 59.3 269 22.3


User provided reference genes

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