Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa023854 Carpinus fangiana HOM05D004860 ORTHO05D126341 0.0e+00 1988.8 1040 100.0
PSO170G1688 Papaver somniferum HOM05D004860 ORTHO05D006366 4.8e-24 117.9 291 33.7
ECA240G4413 Erigeron canadensis HOM05D004860 ORTHO05D006366 8.2e-24 117.1 318 33.3
PSO407G0112 Papaver somniferum HOM05D004860 ORTHO05D006366 8.2e-24 117.1 298 33.2
Nn4g26191 Nelumbo nucifera HOM05D004860 ORTHO05D006366 1.8e-23 115.9 292 32.9
Pp3c4_4720 Physcomitrium patens HOM05D004860 ORTHO05D006366 2.4e-23 115.5 286 33.2
Aqoxy2G03261 Aquilegia oxysepala HOM05D004860 ORTHO05D006366 3.1e-23 115.2 296 32.4
Zm00001eb303280 Zea mays HOM05D004860 ORTHO05D006366 4.1e-23 114.8 291 33.7
CARHR193940 Cardamine hirsuta HOM05D004860 ORTHO05D006366 9.0e-23 113.6 294 31.6
Lalb_Chr07g0177321 Lupinus albus HOM05D004860 ORTHO05D006366 9.0e-23 113.6 290 31.4
Ah.07g203980 Amaranthus hybridus HOM05D004860 ORTHO05D006366 1.2e-22 113.2 299 33.8
Carub.0006s1737 Capsella rubella HOM05D004860 ORTHO05D006366 1.2e-22 113.2 296 33.1
COL.COLO4_21645 Corchorus olitorius HOM05D004860 ORTHO05D006366 1.2e-22 113.2 318 31.4
Os07g0211800 Oryza sativa ssp. japonica HOM05D004860 ORTHO05D006366 1.2e-22 113.2 291 33.3
FAN12G3962 Fragaria x ananassa HOM05D004860 ORTHO05D006366 2.0e-22 112.5 295 32.2
arahy.Tifrunner.gnm1.ann1.K193BP Arachis hypogaea HOM05D004860 ORTHO05D006366 2.6e-22 112.1 280 31.4
BcaB01g04878 Brassica carinata HOM05D004860 ORTHO05D006366 2.6e-22 112.1 296 33.1
MELO3C006570.2 Cucumis melo HOM05D004860 ORTHO05D006366 2.6e-22 112.1 289 32.9
FvH4_4g14470 Fragaria vesca HOM05D004860 ORTHO05D006366 2.6e-22 112.1 295 31.5
Sed0000368 Sechium edule HOM05D004860 ORTHO05D006366 2.6e-22 112.1 288 33.0
SEGI_28969 Sequoiadendron giganteum HOM05D004860 ORTHO05D006366 2.6e-22 112.1 285 32.3
AT5G19050 Arabidopsis thaliana HOM05D004860 ORTHO05D006366 3.4e-22 111.7 296 32.8
ClCG05G005460 Citrullus lanatus HOM05D004860 ORTHO05D006366 3.4e-22 111.7 289 32.9
arahy.Tifrunner.gnm1.ann1.PDW3QZ Arachis hypogaea HOM05D004860 ORTHO05D006366 4.5e-22 111.3 280 31.4
BraA03t10247Z Brassica rapa HOM05D004860 ORTHO05D006366 4.5e-22 111.3 296 32.8
Cc03_g03100 Coffea canephora HOM05D004860 ORTHO05D006366 4.5e-22 111.3 292 31.5
CsaV3_3G013760 Cucumis sativus L. HOM05D004860 ORTHO05D006366 4.5e-22 111.3 287 32.1
PGR031G2771 Punica granatum HOM05D004860 ORTHO05D006366 4.5e-22 111.3 291 33.0
RcHm_v2.0_Chr4g0418381 Rosa chinensis HOM05D004860 ORTHO05D006366 4.5e-22 111.3 295 32.9
Glyma.07G256800 Glycine max HOM05D004860 ORTHO05D006366 5.8e-22 110.9 289 32.2
Gohir.A05G316600 Gossypium hirsutum HOM05D004860 ORTHO05D006366 5.8e-22 110.9 317 30.9
SMO119G0283 Selaginella moellendorffii HOM05D004860 ORTHO05D006366 5.8e-22 110.9 315 31.7
A03p09270 Brassica napus HOM05D004860 ORTHO05D006366 7.6e-22 110.5 339 32.4
Lj4g0005512 Lotus japonicus HOM05D004860 ORTHO05D006366 7.6e-22 110.5 287 31.7
AL6G30430 Arabidopsis lyrata HOM05D004860 ORTHO05D006366 1.0e-21 110.2 296 32.8
Eucgr.D02658 Eucalyptus grandis HOM05D004860 ORTHO05D006366 1.0e-21 110.2 289 32.5
MD16G1183500 Malus domestica HOM05D004860 ORTHO05D006366 1.0e-21 110.2 296 33.4
BcaB08g36622 Brassica carinata HOM05D004860 ORTHO05D006366 1.3e-21 109.8 296 32.1
FAN22G2324 Fragaria x ananassa HOM05D004860 ORTHO05D006366 1.3e-21 109.8 295 31.5
Sp6g25330 Schrenkiella parvula HOM05D004860 ORTHO05D006366 1.3e-21 109.8 320 31.6
Ah.13g074180 Amaranthus hybridus HOM05D004860 ORTHO05D006366 1.7e-21 109.4 291 32.6
Thhalv10013904m.g Eutrema salsugineum HOM05D004860 ORTHO05D006366 1.7e-21 109.4 296 32.4
FAN07G1456 Fragaria x ananassa HOM05D004860 ORTHO05D006366 1.7e-21 109.4 293 31.4
Thecc.04G221400 Theobroma cacao HOM05D004860 ORTHO05D006366 1.7e-21 109.4 294 31.3
Gorai.009G340700 Gossypium raimondii HOM05D004860 ORTHO05D006366 2.2e-21 109.0 288 31.6
unitig_8.g2879 Utricularia gibba HOM05D004860 ORTHO05D006366 2.2e-21 109.0 296 30.4
AagrBONN_evm.TU.Sc2ySwM_117.2400 Anthoceros agrestis HOM05D004860 ORTHO05D006366 2.9e-21 108.6 330 31.2
QL06p004255 Quercus lobata HOM05D004860 ORTHO05D006366 2.9e-21 108.6 287 31.7
Duzib268G1873 Durio zibethinus HOM05D004860 ORTHO05D006366 3.8e-21 108.2 294 31.6
Migut.N00151 Erythranthe guttata HOM05D004860 ORTHO05D006366 3.8e-21 108.2 296 31.4
MD13G1182900 Malus domestica HOM05D004860 ORTHO05D006366 3.8e-21 108.2 296 32.4
Mapoly0095s0018 Marchantia polymorpha HOM05D004860 ORTHO05D006366 3.8e-21 108.2 287 31.7
TAR636G2819 Trochodendron aralioides HOM05D004860 ORTHO05D006366 3.8e-21 108.2 289 31.8
BcaB01g05289 Brassica carinata HOM05D004860 ORTHO05D006366 5.0e-21 107.8 296 32.8
A10p20640 Brassica napus HOM05D004860 ORTHO05D006366 5.0e-21 107.8 296 32.4
C03p10800 Brassica napus HOM05D004860 ORTHO05D006366 5.0e-21 107.8 296 32.8
BolC3t13554H Brassica oleracea HOM05D004860 ORTHO05D006366 5.0e-21 107.8 296 32.8
BolC9t58612H Brassica oleracea HOM05D004860 ORTHO05D006366 5.0e-21 107.8 296 32.4
BraA10t44127Z Brassica rapa HOM05D004860 ORTHO05D006366 5.0e-21 107.8 296 32.4
CANSAT78G2493 Cannabis sativa HOM05D004860 ORTHO05D006366 5.0e-21 107.8 300 32.7
Nitab4.5_0001247g0010 Nicotiana tabacum HOM05D004860 ORTHO05D006366 6.5e-21 107.5 318 30.8
TWI73G0632 Tripterygium wilfordii HOM05D004860 ORTHO05D006366 6.5e-21 107.5 295 31.9
Aa31LG11G10670 Aethionema arabicum HOM05D004860 ORTHO05D006366 8.4e-21 107.1 300 31.7
BcaC04g18624 Brassica carinata HOM05D004860 ORTHO05D006366 8.4e-21 107.1 296 31.8
AUR62030079 Chenopodium quinoa HOM05D004860 ORTHO05D006366 8.4e-21 107.1 287 31.4
Ciclev10005293m.g Citrus clementina HOM05D004860 ORTHO05D006366 8.4e-21 107.1 294 31.3
Lj6A565G28 Lonicera japonica HOM05D004860 ORTHO05D006366 8.4e-21 107.1 272 32.0
Phvul.003G093000 Phaseolus vulgaris HOM05D004860 ORTHO05D006366 8.4e-21 107.1 287 31.0
Prupe.1G151200 Prunus persica HOM05D004860 ORTHO05D006366 8.4e-21 107.1 289 32.2
C09p57430 Brassica napus HOM05D004860 ORTHO05D006366 1.1e-20 106.7 296 32.4
Potri.008G202300 Populus trichocarpa HOM05D004860 ORTHO05D006366 1.1e-20 106.7 296 31.4
CSS0038220 Camellia sinensis var. sinensis HOM05D004860 ORTHO05D006366 1.4e-20 106.3 289 31.8
Psat4g031440 Pisum sativum HOM05D004860 ORTHO05D006366 1.9e-20 105.9 289 30.8
THA.LOC104822311 Tarenaya hassleriana HOM05D004860 ORTHO05D006366 1.9e-20 105.9 287 32.1
TPR.G20138 Trifolium pratense HOM05D004860 ORTHO05D006366 1.9e-20 105.9 287 30.0
Ca_21591_v3 Cicer arietinum L. HOM05D004860 ORTHO05D006366 2.5e-20 105.5 287 30.3
Sopen01g031920 Solanum pennellii HOM05D004860 ORTHO05D006366 2.5e-20 105.5 318 31.1
Lj3C761T9 Lonicera japonica HOM05D004860 ORTHO05D006366 3.2e-20 105.1 295 32.5
Solyc01g080140.3 Solanum lycopersicum HOM05D004860 ORTHO05D006366 3.2e-20 105.1 318 31.1
GSVIVG01017886001 Vitis vinifera HOM05D004860 ORTHO05D006366 3.2e-20 105.1 289 31.8
Glyma.17G017300 Glycine max HOM05D004860 ORTHO05D006366 4.2e-20 104.8 287 31.0
Medtr4g117310 Medicago truncatula HOM05D004860 ORTHO05D006366 4.2e-20 104.8 287 30.3
THA.LOC104818790 Tarenaya hassleriana HOM05D004860 ORTHO05D006366 4.2e-20 104.8 287 31.0
CDE02G3435 Ceratophyllum demersum HOM05D004860 ORTHO05D006366 5.5e-20 104.4 294 32.0
HanXRQChr09g0248101 Helianthus annuus HOM05D004860 ORTHO05D006366 5.5e-20 104.4 295 32.2
Atru.chr4.2574 Acer truncatum HOM05D004860 ORTHO05D006366 7.2e-20 104.0 294 30.6
CiPaw.02G092200 Carya illinoinensis HOM05D004860 ORTHO05D006366 7.2e-20 104.0 285 31.2
SalBow5G0733 Salvia bowleyana HOM05D004860 ORTHO05D006366 9.3e-20 103.6 296 29.7
AUR62038223 Chenopodium quinoa HOM05D004860 ORTHO05D006366 1.2e-19 103.2 287 30.7
SalBow5G4413 Salvia bowleyana HOM05D004860 ORTHO05D006366 1.2e-19 103.2 296 29.7
PRCOL_00003006 Prasinoderma coloniale HOM05D004860 ORTHO05D006366 1.6e-19 102.8 298 32.6
Cfa015580 Carpinus fangiana HOM05D004860 ORTHO05D006366 2.7e-19 102.1 296 31.4
MSTRG.24756 Avicennia marina HOM05D004860 ORTHO05D006366 3.5e-19 101.7 296 31.4
Actinidia40192 Actinidia chinensis HOM05D004860 ORTHO05D006366 4.6e-19 101.3 294 30.3
Duzib212G0960 Durio zibethinus HOM05D004860 ORTHO05D006366 6.1e-19 100.9 295 29.5
Migut.G00288 Erythranthe guttata HOM05D004860 ORTHO05D006366 6.1e-19 100.9 287 31.4
Manes.15G022900 Manihot esculenta HOM05D004860 ORTHO05D006366 6.1e-19 100.9 296 31.8
Oeu029304.1 Olea europaea HOM05D004860 ORTHO05D006366 6.1e-19 100.9 296 30.1
TAR365G0160 Trochodendron aralioides HOM05D004860 ORTHO05D006366 1.3e-18 99.8 289 30.4
Cpa.g.sc16.26 Carica papaya HOM05D004860 ORTHO05D006366 1.8e-18 99.4 259 32.0
Nn1g02160 Nelumbo nucifera HOM05D004860 ORTHO05D006366 3.9e-18 98.2 256 32.0
Dinv38393 Davidia involucrata HOM05D001530 ORTHO05D004168 5.1e-18 97.8 281 30.6
Lsat_1_v5_gn_7_67361 Lactuca sativa HOM05D004860 ORTHO05D006366 5.1e-18 97.8 208 37.0
Hund12197 Selenicereus undatus HOM05D004860 ORTHO05D000105 5.1e-18 97.8 294 29.6
EL10Ac3g06352 Beta vulgaris HOM05D004860 ORTHO05D006366 6.7e-18 97.4 334 28.7
Manes.03G184900 Manihot esculenta HOM05D004860 ORTHO05D006366 6.7e-18 97.4 233 33.5
Sabra08G0159200 Salix brachista HOM05D004860 ORTHO05D006366 6.7e-18 97.4 261 31.4
SalBow2G3077 Salvia bowleyana HOM05D004860 ORTHO05D006366 4.3e-17 94.7 322 29.2
MBI17_g12009_MAGBIO Magnolia biondii HOM05D004860 ORTHO05D006366 7.4e-17 94.0 294 30.3
TWI53G0789 Tripterygium wilfordii HOM05D004860 ORTHO05D006366 2.8e-16 92.0 203 35.5
Gohir.D05G318100 Gossypium hirsutum HOM05D004860 ORTHO05D006366 8.2e-16 90.5 312 28.5
ATR0626G115 Amborella trichopoda HOM05D004860 ORTHO05D006366 1.8e-15 89.4 225 32.9
Peaxi162Scf01766g00011 Petunia axillaris HOM05D004860 ORTHO05D006366 1.8e-15 89.4 232 33.2
Actinidia12990 Actinidia chinensis HOM05D004860 ORTHO05D006366 2.4e-15 89.0 281 30.6
CAN.G183.30 Capsicum annuum HOM05D004860 ORTHO05D006366 6.9e-15 87.4 208 33.7
CiPaw.01G159800 Carya illinoinensis HOM05D004860 ORTHO05D006366 9.0e-15 87.0 287 28.6
VMungo1215G0515 Vigna mungo HOM05D004860 ORTHO05D006366 3.4e-14 85.1 167 34.7
Dinv44480 Davidia involucrata HOM05D001530 ORTHO05D004168 5.9e-14 84.3 328 27.7
SGA_v2.0_scaffold166G38376 Striga asiatica HOM05D004860 ORTHO05D006366 7.7e-14 84.0 208 32.7
Sc13g0003950 Simmondsia chinensis HOM05D004860 ORTHO05D006366 1.7e-13 82.8 167 35.3
Cre06.g283034 Chlamydomonas reinhardtii HOM05D004860 ORTHO05D006366 6.5e-13 80.9 341 26.1
vmacro08274 Vaccinium macrocarpon HOM05D004860 ORTHO05D006366 6.5e-13 80.9 272 29.8
Rhsim04G0207200 Rhododendron simsii HOM05D004860 ORTHO05D006366 1.9e-12 79.3 287 28.9
HPP92_027344 Vanilla planifolia HOM05D004860 ORTHO05D006366 1.9e-12 79.3 139 38.8
Haze_00965 Corylus avellana HOM05D004860 ORTHO05D006366 3.0e-10 72.0 100 43.0
Actinidia23474 Actinidia chinensis HOM05D004860 ORTHO05D006366 2.0e-09 69.3 147 36.7
Oeu017197.2 Olea europaea HOM05D004860 ORTHO05D006366 1.7e-08 66.2 248 28.2
Nitab4.5_0002954g0030 Nicotiana tabacum HOM05D004860 ORTHO05D006366 1.2e-06 60.1 143 33.6
SHI00370 Sapria himalayana HOM05D004860 ORTHO05D000023 2.0e-06 59.3 181 29.3


User provided reference genes

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