Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa023716 Carpinus fangiana HOM05D006333 ORTHO05D007799 1.3e-179 633.3 398 100.0
Cfa024705 Carpinus fangiana HOM05D006333 ORTHO05D007799 3.6e-20 103.6 279 30.1
Cre05.g234647 Chlamydomonas reinhardtii HOM05D006333 ORTHO05D007799 8.5e-14 82.4 299 29.1
PRCOL_00000482 Prasinoderma coloniale HOM05D006333 ORTHO05D007799 1.1e-13 82.0 293 27.6
CBR_g5629 Chara braunii HOM05D006333 ORTHO05D007799 9.4e-13 79.0 98 44.9
SMO116G0442 Selaginella moellendorffii HOM05D006333 ORTHO05D007799 1.2e-12 78.6 285 27.0
arahy.Tifrunner.gnm1.ann1.A0JP3J Arachis hypogaea HOM05D006333 ORTHO05D007799 3.6e-12 77.0 286 27.3
Ca_19901_v3 Cicer arietinum L. HOM05D006333 ORTHO05D007799 4.7e-12 76.6 287 26.5
Pp3c7_23360 Physcomitrium patens HOM05D006333 ORTHO05D007799 1.0e-11 75.5 100 43.0
Os10g0486000 Oryza sativa ssp. japonica HOM05D006333 ORTHO05D007799 1.4e-11 75.1 297 27.3
PGR044G2499 Punica granatum HOM05D006333 ORTHO05D007799 1.4e-11 75.1 296 26.4
arahy.Tifrunner.gnm1.ann1.N7V6FU Arachis hypogaea HOM05D006333 ORTHO05D007799 2.3e-11 74.3 294 28.6
Phvul.011G028900 Phaseolus vulgaris HOM05D006333 ORTHO05D007799 2.3e-11 74.3 99 42.4
VMungo1127G0165 Vigna mungo HOM05D006333 ORTHO05D007799 2.3e-11 74.3 99 42.4
CiPaw.05G169800 Carya illinoinensis HOM05D006333 ORTHO05D007799 3.0e-11 73.9 99 45.5
Thhalv10008690m.g Eutrema salsugineum HOM05D006333 ORTHO05D007799 3.0e-11 73.9 112 39.3
THA.LOC104808350 Tarenaya hassleriana HOM05D006333 ORTHO05D007799 3.0e-11 73.9 124 36.3
AT1G17330 Arabidopsis thaliana HOM05D006333 ORTHO05D007799 4.0e-11 73.6 99 42.4
Aa31LG7G2140 Aethionema arabicum HOM05D006333 ORTHO05D007799 5.2e-11 73.2 99 41.4
BcaB07g34033 Brassica carinata HOM05D006333 ORTHO05D007799 5.2e-11 73.2 87 46.0
CSS0015547 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 5.2e-11 73.2 98 41.8
Glyma.12G026000 Glycine max HOM05D006333 ORTHO05D007799 5.2e-11 73.2 99 41.4
Psat7g233400 Pisum sativum HOM05D006333 ORTHO05D007799 5.2e-11 73.2 287 26.8
Sopen02g004090 Solanum pennellii HOM05D006333 ORTHO05D007799 5.2e-11 73.2 294 25.9
ATR0618G379 Amborella trichopoda HOM05D006333 ORTHO05D007799 6.8e-11 72.8 100 42.0
BcaC05g25649 Brassica carinata HOM05D006333 ORTHO05D007799 6.8e-11 72.8 87 46.0
C05p15710 Brassica napus HOM05D006333 ORTHO05D007799 6.8e-11 72.8 87 46.0
BolC5t30276H Brassica oleracea HOM05D006333 ORTHO05D007799 6.8e-11 72.8 87 46.0
Ciclev10032700m.g Citrus clementina HOM05D006333 ORTHO05D007799 6.8e-11 72.8 99 42.4
ECA233G4371 Erigeron canadensis HOM05D006333 ORTHO05D007799 6.8e-11 72.8 99 44.4
Lj3g0001632 Lotus japonicus HOM05D006333 ORTHO05D007799 6.8e-11 72.8 99 41.4
Thecc.02G159600 Theobroma cacao HOM05D006333 ORTHO05D007799 6.8e-11 72.8 99 43.4
TPR.G9857 Trifolium pratense HOM05D006333 ORTHO05D007799 6.8e-11 72.8 99 41.4
unitig_32.g11605 Utricularia gibba HOM05D006333 ORTHO05D007799 6.8e-11 72.8 102 41.2
Nn5g28807 Nelumbo nucifera HOM05D006333 ORTHO05D007799 8.8e-11 72.4 99 44.4
CARHR017920 Cardamine hirsuta HOM05D006333 ORTHO05D007799 1.2e-10 72.0 108 40.7
PSO782G2700 Papaver somniferum HOM05D006333 ORTHO05D007799 1.2e-10 72.0 99 42.4
SalBow1G5083 Salvia bowleyana HOM05D006333 ORTHO05D007799 1.2e-10 72.0 96 44.8
GSVIVG01012055001 Vitis vinifera HOM05D006333 ORTHO05D007799 1.2e-10 72.0 99 41.4
AL1G29580 Arabidopsis lyrata HOM05D006333 ORTHO05D007799 1.5e-10 71.6 99 41.4
A06p13260 Brassica napus HOM05D006333 ORTHO05D007799 1.5e-10 71.6 85 45.9
BraA06t24479Z Brassica rapa HOM05D006333 ORTHO05D007799 1.5e-10 71.6 85 45.9
TWI53G1586 Tripterygium wilfordii HOM05D006333 ORTHO05D007799 1.5e-10 71.6 99 41.4
Zm00001eb045350 Zea mays HOM05D006333 ORTHO05D007799 1.5e-10 71.6 107 42.1
Eucgr.J00869 Eucalyptus grandis HOM05D006333 ORTHO05D007799 2.0e-10 71.2 104 43.3
Lalb_Chr01g0001411 Lupinus albus HOM05D006333 ORTHO05D007799 2.0e-10 71.2 99 40.4
Sp1g15450 Schrenkiella parvula HOM05D006333 ORTHO05D007799 2.0e-10 71.2 87 44.8
Solyc02g014720.4 Solanum lycopersicum HOM05D006333 ORTHO05D007799 2.0e-10 71.2 98 41.8
Aqoxy3G04253 Aquilegia oxysepala HOM05D006333 ORTHO05D007799 2.6e-10 70.9 98 43.9
Lj3A849G43 Lonicera japonica HOM05D006333 ORTHO05D007799 2.6e-10 70.9 126 36.5
Cpa.g.sc0.135 Carica papaya HOM05D006333 ORTHO05D007799 3.4e-10 70.5 99 40.4
CSS0049289 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 4.4e-10 70.1 98 39.8
Dinv17616 Davidia involucrata HOM05D006333 ORTHO05D007799 4.4e-10 70.1 101 42.6
Medtr4g023480 Medicago truncatula HOM05D006333 ORTHO05D007799 4.4e-10 70.1 99 40.4
Potri.007G072000 Populus trichocarpa HOM05D006333 ORTHO05D007799 4.4e-10 70.1 85 45.9
Carub.0001s1708 Capsella rubella HOM05D006333 ORTHO05D007799 5.7e-10 69.7 85 44.7
HanXRQChr12g0366301 Helianthus annuus HOM05D006333 ORTHO05D007799 5.7e-10 69.7 102 40.2
Manes.04G057700 Manihot esculenta HOM05D006333 ORTHO05D007799 5.7e-10 69.7 99 39.4
Prupe.1G347900 Prunus persica HOM05D006333 ORTHO05D007799 5.7e-10 69.7 99 40.4
SalBow7G0482 Salvia bowleyana HOM05D006333 ORTHO05D007799 5.7e-10 69.7 84 47.6
FvH4_4g36970 Fragaria vesca HOM05D006333 ORTHO05D007799 7.5e-10 69.3 102 42.2
FAN12G1853 Fragaria x ananassa HOM05D006333 ORTHO05D007799 7.5e-10 69.3 102 42.2
Hma1.2p1_0044F.1_g026090 Hydrangea macrophylla HOM05D006333 ORTHO05D007799 7.5e-10 69.3 98 41.8
PSO063G3232 Papaver somniferum HOM05D006333 ORTHO05D007799 7.5e-10 69.3 92 43.5
TAR629G0175 Trochodendron aralioides HOM05D006333 ORTHO05D007799 7.5e-10 69.3 84 47.6
Duzib132G1109 Durio zibethinus HOM05D006333 ORTHO05D007799 9.8e-10 68.9 99 41.4
FAN07G1904 Fragaria x ananassa HOM05D006333 ORTHO05D007799 9.8e-10 68.9 99 39.4
Prupe.1G347700 Prunus persica HOM05D006333 ORTHO05D007799 9.8e-10 68.9 102 42.2
SGA_v2.0_scaffold146G36264 Striga asiatica HOM05D006333 ORTHO05D007799 9.8e-10 68.9 84 42.9
Cfa008751 Carpinus fangiana HOM05D006333 ORTHO05D007799 1.3e-09 68.6 84 46.4
MELO3C024016.2 Cucumis melo HOM05D006333 ORTHO05D007799 1.3e-09 68.6 99 38.4
CsaV3_3G031750 Cucumis sativus L. HOM05D006333 ORTHO05D007799 1.3e-09 68.6 99 38.4
DCAR_008496 Daucus carota HOM05D003141 ORTHO05D003633 1.3e-09 68.6 270 24.8
Migut.A00709 Erythranthe guttata HOM05D006333 ORTHO05D007799 1.3e-09 68.6 85 45.9
Gohir.A13G060400 Gossypium hirsutum HOM05D006333 ORTHO05D007799 1.3e-09 68.6 99 42.4
MCO07G572 Micromonas commoda HOM05D006333 ORTHO05D007799 1.3e-09 68.6 291 25.8
Sabra07G0060700 Salix brachista HOM05D006333 ORTHO05D007799 1.3e-09 68.6 85 44.7
Sc17g0000100 Simmondsia chinensis HOM05D006333 ORTHO05D007799 1.3e-09 68.6 91 42.9
SGA_v2.0_scaffold173G39125 Striga asiatica HOM05D006333 ORTHO05D007799 1.3e-09 68.6 101 40.6
Gohir.D13G061500 Gossypium hirsutum HOM05D006333 ORTHO05D007799 1.7e-09 68.2 99 41.4
Lsat_1_v5_gn_8_33120 Lactuca sativa HOM05D006333 ORTHO05D007799 1.7e-09 68.2 101 41.6
MSTRG.11948 Avicennia marina HOM05D006333 ORTHO05D007799 2.2e-09 67.8 294 24.8
CAN.G1011.5 Capsicum annuum HOM05D006333 ORTHO05D007799 2.2e-09 67.8 98 39.8
AUR62032988 Chenopodium quinoa HOM05D006333 ORTHO05D007799 2.2e-09 67.8 84 42.9
Gorai.013G070000 Gossypium raimondii HOM05D006333 ORTHO05D007799 2.2e-09 67.8 99 41.4
MD13G1004800 Malus domestica HOM05D006333 ORTHO05D007799 2.2e-09 67.8 102 42.2
Peaxi162Scf00334g00421 Petunia axillaris HOM05D006333 ORTHO05D007799 2.2e-09 67.8 97 42.3
Hund24376 Selenicereus undatus HOM05D006333 ORTHO05D007799 2.2e-09 67.8 91 40.7
HPP92_008575 Vanilla planifolia HOM05D006333 ORTHO05D007799 2.2e-09 67.8 107 37.4
Atru.chr11.1164 Acer truncatum HOM05D006333 ORTHO05D007799 2.8e-09 67.4 98 39.8
AUR62017701 Chenopodium quinoa HOM05D006333 ORTHO05D007799 2.8e-09 67.4 98 40.8
MBI06_g42293_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 2.8e-09 67.4 99 43.4
Rhsim09G0071800 Rhododendron simsii HOM05D006333 ORTHO05D007799 2.8e-09 67.4 98 39.8
Eucgr.J00870 Eucalyptus grandis HOM05D006333 ORTHO05D007799 3.7e-09 67.0 104 41.3
Sed0022709 Sechium edule HOM05D006333 ORTHO05D007799 3.7e-09 67.0 291 25.4
vmacro16037 Vaccinium macrocarpon HOM05D006333 ORTHO05D007799 3.7e-09 67.0 98 40.8
ClCG10G012010 Citrullus lanatus HOM05D006333 ORTHO05D007799 4.8e-09 66.6 85 42.4
RcHm_v2.0_Chr4g0446761 Rosa chinensis HOM05D006333 ORTHO05D007799 4.8e-09 66.6 101 41.6
EL10Ac9g22952 Beta vulgaris HOM05D006333 ORTHO05D007799 6.3e-09 66.2 91 41.8
CANSAT56G2519 Cannabis sativa HOM05D006333 ORTHO05D007799 8.3e-09 65.9 98 38.8
CDE02G3779 Ceratophyllum demersum HOM05D006333 ORTHO05D007799 8.3e-09 65.9 99 42.4
COL.COLO4_08588 Corchorus olitorius HOM05D006333 ORTHO05D007799 8.3e-09 65.9 98 38.8
Cc11_g02420 Coffea canephora HOM05D006333 ORTHO05D007799 1.1e-08 65.5 81 44.4
Nitab4.5_0008825g0020 Nicotiana tabacum HOM05D006333 ORTHO05D007799 1.1e-08 65.5 98 38.8
Nitab4.5_0003092g0070 Nicotiana tabacum HOM05D006333 ORTHO05D007799 3.1e-08 63.9 284 26.1
Atru.chr11.2675 Acer truncatum HOM05D006333 ORTHO05D007799 9.1e-08 62.4 84 41.7
Mapoly0006s0058 Marchantia polymorpha HOM05D006333 ORTHO05D007799 9.1e-08 62.4 99 39.4
Atru.chr11.2676 Acer truncatum HOM05D006333 ORTHO05D007799 1.2e-07 62.0 84 41.7
Ah.01g001500 Amaranthus hybridus HOM05D006333 ORTHO05D007799 5.9e-07 59.7 258 25.2


User provided reference genes

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