Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa023704 Carpinus fangiana HOM05D005288 ORTHO05D006574 3.2e-179 631.7 333 100.0
Migut.H01124 Erythranthe guttata HOM05D005288 ORTHO05D006574 1.5e-24 117.9 189 38.1
Hund15173 Selenicereus undatus HOM05D005288 ORTHO05D006574 7.6e-24 115.5 178 38.2
MSTRG.2688 Avicennia marina HOM05D005288 ORTHO05D006574 1.3e-23 114.8 195 36.9
vmacro12445 Vaccinium macrocarpon HOM05D005288 ORTHO05D006574 1.7e-23 114.4 186 37.1
Zm00001eb129960 Zea mays HOM05D005288 ORTHO05D006574 1.7e-23 114.4 178 38.2
unitig_27.g25064 Utricularia gibba HOM05D005288 ORTHO05D006574 2.2e-23 114.0 178 37.6
ATR0681G389 Amborella trichopoda HOM05D005288 ORTHO05D006574 3.8e-23 113.2 178 38.2
Os08g0310100 Oryza sativa ssp. japonica HOM05D005288 ORTHO05D006574 3.8e-23 113.2 178 37.1
SGA_v2.0_scaffold146G36155 Striga asiatica HOM05D005288 ORTHO05D006574 6.4e-23 112.5 178 37.1
Cc03_g13010 Coffea canephora HOM05D005288 ORTHO05D006574 1.1e-22 111.7 190 36.3
Dinv09930 Davidia involucrata HOM05D005288 ORTHO05D006574 1.1e-22 111.7 185 36.8
Nitab4.5_0007636g0020 Nicotiana tabacum HOM05D005288 ORTHO05D006574 1.4e-22 111.3 186 37.6
Sc22g0002320 Simmondsia chinensis HOM05D005288 ORTHO05D006574 1.4e-22 111.3 224 33.5
Solyc02g081310.3 Solanum lycopersicum HOM05D005288 ORTHO05D006574 1.9e-22 110.9 186 36.6
Sopen02g025940 Solanum pennellii HOM05D005288 ORTHO05D006574 1.9e-22 110.9 186 36.6
EL10As1g23109 Beta vulgaris HOM05D005288 ORTHO05D006574 2.4e-22 110.5 178 36.5
CAN.G1681.15 Capsicum annuum HOM05D005288 ORTHO05D006574 2.4e-22 110.5 186 36.6
AUR62037110 Chenopodium quinoa HOM05D005288 ORTHO05D006574 3.2e-22 110.2 178 37.1
PSO210G3075 Papaver somniferum HOM05D005288 ORTHO05D006574 3.2e-22 110.2 194 36.6
PSO238G0014 Papaver somniferum HOM05D005288 ORTHO05D006574 3.2e-22 110.2 194 36.6
PGSC0003DMG400016731 Solanum tuberosum HOM05D005288 ORTHO05D006574 3.2e-22 110.2 186 36.6
HanXRQChr17g0554451 Helianthus annuus HOM05D005288 ORTHO05D006574 4.2e-22 109.8 185 36.8
GSVIVG01016205001 Vitis vinifera HOM05D005288 ORTHO05D006574 5.4e-22 109.4 185 36.8
MSTRG.23423 Avicennia marina HOM05D005288 ORTHO05D006574 7.1e-22 109.0 178 37.1
CSS0028117 Camellia sinensis var. sinensis HOM05D005288 ORTHO05D006574 7.1e-22 109.0 194 35.1
CSS0042405 Camellia sinensis var. sinensis HOM05D005288 ORTHO05D006574 7.1e-22 109.0 194 35.1
DCAR_029930 Daucus carota HOM05D005288 ORTHO05D006574 7.1e-22 109.0 185 37.8
Hma1.2p1_1099F.1_g256850 Hydrangea macrophylla HOM05D005288 ORTHO05D006574 7.1e-22 109.0 178 37.1
Lsat_1_v5_gn_5_89980 Lactuca sativa HOM05D005288 ORTHO05D006574 7.1e-22 109.0 178 37.1
Nitab4.5_0002064g0080 Nicotiana tabacum HOM05D005288 ORTHO05D006574 7.1e-22 109.0 186 36.6
Peaxi162Scf00129g00316 Petunia axillaris HOM05D005288 ORTHO05D006574 7.1e-22 109.0 216 35.6
TAR628G1127 Trochodendron aralioides HOM05D005288 ORTHO05D006574 1.2e-21 108.2 185 37.8
Lj4A865T28 Lonicera japonica HOM05D005288 ORTHO05D006574 1.6e-21 107.8 182 36.8
Ah.12g062320 Amaranthus hybridus HOM05D005288 ORTHO05D006574 2.1e-21 107.5 178 36.0
Oeu028499.1 Olea europaea HOM05D005288 ORTHO05D006574 3.5e-21 106.7 181 36.5
THA.LOC104799448 Tarenaya hassleriana HOM05D005288 ORTHO05D006574 3.5e-21 106.7 190 36.3
CDE04G3439 Ceratophyllum demersum HOM05D005288 ORTHO05D006574 4.6e-21 106.3 188 36.2
AUR62042368 Chenopodium quinoa HOM05D005288 ORTHO05D006574 4.6e-21 106.3 178 36.0
Actinidia06665 Actinidia chinensis HOM05D005288 ORTHO05D006574 6.0e-21 105.9 193 37.3
Sabra16G0006900 Salix brachista HOM05D005288 ORTHO05D006574 6.0e-21 105.9 186 37.6
Cpa.g.sc42.91 Carica papaya HOM05D005288 ORTHO05D006574 7.9e-21 105.5 223 32.3
ECA248G2357 Erigeron canadensis HOM05D005288 ORTHO05D006574 7.9e-21 105.5 166 38.6
Manes.12G150400 Manihot esculenta HOM05D005288 ORTHO05D006574 7.9e-21 105.5 186 37.1
CiPaw.04G084200 Carya illinoinensis HOM05D005288 ORTHO05D006574 1.8e-20 104.4 186 37.1
SGA_v2.0_scaffold76G25165 Striga asiatica HOM05D005288 ORTHO05D006574 1.8e-20 104.4 252 31.7
Potri.016G002400 Populus trichocarpa HOM05D005288 ORTHO05D006574 2.3e-20 104.0 186 37.1
Rhsim10G0141500 Rhododendron simsii HOM05D005288 ORTHO05D006574 2.3e-20 104.0 193 35.2
MBI11_g07621_MAGBIO Magnolia biondii HOM05D005288 ORTHO05D006574 3.0e-20 103.6 228 34.2
MD17G1181300 Malus domestica HOM05D005288 ORTHO05D006574 3.0e-20 103.6 188 36.7
BcaB02g09811 Brassica carinata HOM05D005288 ORTHO05D006574 3.9e-20 103.2 190 34.7
CANSAT78G2510 Cannabis sativa HOM05D005288 ORTHO05D006574 3.9e-20 103.2 185 36.2
Ca_24797_v3 Cicer arietinum L. HOM05D005288 ORTHO05D006574 3.9e-20 103.2 196 35.2
Nn1g06103 Nelumbo nucifera HOM05D005288 ORTHO05D006574 3.9e-20 103.2 188 36.7
A06p31470 Brassica napus HOM05D005288 ORTHO05D006574 5.1e-20 102.8 188 35.1
CiPaw.03G124000 Carya illinoinensis HOM05D005288 ORTHO05D006574 5.1e-20 102.8 186 37.1
Aa31LG1G17270 Aethionema arabicum HOM05D005288 ORTHO05D006574 6.7e-20 102.4 188 35.1
AL8G42090 Arabidopsis lyrata HOM05D005288 ORTHO05D006574 6.7e-20 102.4 188 35.1
AT5G64670 Arabidopsis thaliana HOM05D005288 ORTHO05D006574 6.7e-20 102.4 188 35.1
BcaC01g02699 Brassica carinata HOM05D005288 ORTHO05D006574 6.7e-20 102.4 188 35.1
A09p08770 Brassica napus HOM05D005288 ORTHO05D006574 6.7e-20 102.4 191 35.1
C03p61490 Brassica napus HOM05D005288 ORTHO05D006574 6.7e-20 102.4 188 35.1
BolC3t18410H Brassica oleracea HOM05D005288 ORTHO05D006574 6.7e-20 102.4 188 35.1
BraA09t36528Z Brassica rapa HOM05D005288 ORTHO05D006574 6.7e-20 102.4 191 35.1
CARHR278650 Cardamine hirsuta HOM05D005288 ORTHO05D006574 6.7e-20 102.4 188 35.1
Prupe.6G163200 Prunus persica HOM05D005288 ORTHO05D006574 6.7e-20 102.4 188 36.7
BcaC04g23299 Brassica carinata HOM05D005288 ORTHO05D006574 8.7e-20 102.1 188 35.1
C09p09960 Brassica napus HOM05D005288 ORTHO05D006574 8.7e-20 102.1 188 35.1
BolC9t53904H Brassica oleracea HOM05D005288 ORTHO05D006574 8.7e-20 102.1 188 35.1
BraA06t26084Z Brassica rapa HOM05D005288 ORTHO05D006574 8.7e-20 102.1 188 35.1
Ca_06746_v3 Cicer arietinum L. HOM05D005288 ORTHO05D006574 8.7e-20 102.1 196 34.7
BcaB04g19983 Brassica carinata HOM05D005288 ORTHO05D006574 1.1e-19 101.7 207 33.8
Carub.0008s2547 Capsella rubella HOM05D005288 ORTHO05D006574 1.1e-19 101.7 188 35.1
Ciclev10026233m.g Citrus clementina HOM05D005288 ORTHO05D006574 1.1e-19 101.7 185 36.2
Medtr1g085490 Medicago truncatula HOM05D005288 ORTHO05D006574 1.1e-19 101.7 200 34.5
QL02p010224 Quercus lobata HOM05D005288 ORTHO05D006574 1.1e-19 101.7 186 36.0
arahy.Tifrunner.gnm1.ann1.A0975M Arachis hypogaea HOM05D005288 ORTHO05D006574 1.5e-19 101.3 191 36.1
Potri.001G324300 Populus trichocarpa HOM05D005288 ORTHO05D006574 1.5e-19 101.3 166 36.7
QL06p051886 Quercus lobata HOM05D005288 ORTHO05D006574 1.5e-19 101.3 179 36.9
Sed0016851 Sechium edule HOM05D005288 ORTHO05D006574 1.5e-19 101.3 186 36.0
Prupe.8G100400 Prunus persica HOM05D005288 ORTHO05D006574 1.9e-19 100.9 166 37.3
Sp2g27730 Schrenkiella parvula HOM05D005288 ORTHO05D006574 1.9e-19 100.9 188 34.6
VMungo0464G1657 Vigna mungo HOM05D005288 ORTHO05D006574 1.9e-19 100.9 190 35.8
Thhalv10004738m.g Eutrema salsugineum HOM05D005288 ORTHO05D006574 2.5e-19 100.5 188 35.1
Medtr1g031890 Medicago truncatula HOM05D005288 ORTHO05D006574 2.5e-19 100.5 196 34.7
Atru.chr4.645 Acer truncatum HOM05D005288 ORTHO05D006574 3.3e-19 100.1 192 35.9
Eucgr.I00243 Eucalyptus grandis HOM05D005288 ORTHO05D006574 3.3e-19 100.1 161 37.3
FAN25G0340 Fragaria x ananassa HOM05D005288 ORTHO05D006574 3.3e-19 100.1 188 36.2
Lj1g0011811 Lotus japonicus HOM05D005288 ORTHO05D006574 3.3e-19 100.1 186 36.6
Gohir.A04G109416 Gossypium hirsutum HOM05D005288 ORTHO05D006574 4.3e-19 99.8 188 35.6
HPP92_011348 Vanilla planifolia HOM05D005288 ORTHO05D006574 4.3e-19 99.8 175 36.0
Aqoxy2G00112 Aquilegia oxysepala HOM05D005288 ORTHO05D006574 5.6e-19 99.4 146 40.4
FAN16G1456 Fragaria x ananassa HOM05D005288 ORTHO05D006574 5.6e-19 99.4 188 36.2
Phvul.005G016800 Phaseolus vulgaris HOM05D005288 ORTHO05D006574 5.6e-19 99.4 190 34.7
PGR119G1388 Punica granatum HOM05D005288 ORTHO05D006574 5.6e-19 99.4 161 36.6
Cfa002866 Carpinus fangiana HOM05D005288 ORTHO05D006574 7.4e-19 99.0 185 35.1
MELO3C022914.2 Cucumis melo HOM05D005288 ORTHO05D006574 7.4e-19 99.0 186 35.5
CsaV3_5G027610 Cucumis sativus L. HOM05D005288 ORTHO05D006574 7.4e-19 99.0 186 35.5
FvH4_3g30590 Fragaria vesca HOM05D005288 ORTHO05D006574 7.4e-19 99.0 188 35.6
Lalb_Chr20g0108351 Lupinus albus HOM05D005288 ORTHO05D006574 7.4e-19 99.0 185 36.2
Glyma.15G264500 Glycine max HOM05D005288 ORTHO05D006574 9.6e-19 98.6 222 31.1
Gorai.012G135300 Gossypium raimondii HOM05D005288 ORTHO05D006574 9.6e-19 98.6 188 35.1
Thecc.02G155300 Theobroma cacao HOM05D005288 ORTHO05D006574 9.6e-19 98.6 186 35.5
Glyma.08G162600 Glycine max HOM05D005288 ORTHO05D006574 1.3e-18 98.2 190 33.7
RcHm_v2.0_Chr5g0056641 Rosa chinensis HOM05D005288 ORTHO05D006574 1.3e-18 98.2 188 35.6
Gohir.D04G148800 Gossypium hirsutum HOM05D005288 ORTHO05D006574 1.6e-18 97.8 188 35.1
Medtr4g118060 Medicago truncatula HOM05D005288 ORTHO05D006574 1.6e-18 97.8 191 34.6
Psat6g157720 Pisum sativum HOM05D005288 ORTHO05D006574 1.6e-18 97.8 166 35.5
FAN21G3369 Fragaria x ananassa HOM05D005288 ORTHO05D006574 2.1e-18 97.4 188 35.6
CBR_g2823 Chara braunii HOM05D005625 ORTHO05D007564 3.7e-18 96.7 179 36.3
Duzib052G0951 Durio zibethinus HOM05D005288 ORTHO05D006574 3.7e-18 96.7 188 35.1
COL.COLO4_33103 Corchorus olitorius HOM05D005288 ORTHO05D006574 6.2e-18 95.9 186 34.9
TWI79G0070 Tripterygium wilfordii HOM05D005288 ORTHO05D006574 6.2e-18 95.9 179 35.2
TWI75G0931 Tripterygium wilfordii HOM05D005288 ORTHO05D006574 1.4e-17 94.7 186 34.4
arahy.Tifrunner.gnm1.ann1.MGEL7E Arachis hypogaea HOM05D005288 ORTHO05D006574 1.8e-17 94.4 200 34.5
AagrBONN_evm.TU.Sc2ySwM_344.1252 Anthoceros agrestis HOM05D005288 ORTHO05D000776 9.0e-17 92.0 184 35.3
Oeu064304.2 Olea europaea HOM05D005288 ORTHO05D006574 1.5e-16 91.3 224 29.5
SHI11525 Sapria himalayana HOM05D005288 ORTHO05D006574 1.1e-14 85.1 163 34.4
Mapoly0177s0003 Marchantia polymorpha HOM05D005288 ORTHO05D006574 5.5e-14 82.8 164 34.8
Mapoly0020s0151 Marchantia polymorpha HOM05D005288 ORTHO05D006574 9.3e-14 82.0 184 32.6
MCO05G392 Micromonas commoda HOM05D005288 ORTHO05D006574 2.1e-13 80.9 256 33.2
PRCOL_00002014 Prasinoderma coloniale HOM05D005288 ORTHO05D006574 6.0e-13 79.3 169 34.3
Pp3c25_6490 Physcomitrium patens HOM05D005288 ORTHO05D006574 1.0e-12 78.6 139 37.4
Cre11.g476800 Chlamydomonas reinhardtii HOM05D005288 ORTHO05D006574 3.9e-12 76.6 209 33.5
Haze_26805 Corylus avellana HOM05D005288 ORTHO05D006574 5.1e-12 76.3 149 36.9
CDE07G0732 Ceratophyllum demersum HOM05D002402 ORTHO05D002633 1.9e-11 74.3 131 36.6
SMO367G0866 Selaginella moellendorffii HOM05D005288 ORTHO05D006574 1.3e-10 71.6 165 34.5
Lalb_Chr25g0284211 Lupinus albus HOM05D005288 ORTHO05D006574 1.1e-09 68.6 106 37.7
Hma1.2p1_1099F.1_g256840 Hydrangea macrophylla HOM05D005288 ORTHO05D006574 2.4e-09 67.4 106 36.8
Haze_25184 Corylus avellana HOM05D005288 ORTHO05D006574 2.0e-08 64.3 106 34.9
Dinv05183 Davidia involucrata HOM05D005288 ORTHO05D006574 2.9e-07 60.5 121 32.2
vmacro12831 Vaccinium macrocarpon HOM05D005288 ORTHO05D006574 7.2e-06 55.8 71 43.7


User provided reference genes

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