Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa023544 Carpinus fangiana HOM05D003643 ORTHO05D005001 1.2e-283 979.2 493 100.0
CiPaw.03G114100 Carya illinoinensis HOM05D003643 ORTHO05D005001 5.4e-252 874.0 491 89.0
Atru.chr1.1970 Acer truncatum HOM05D003643 ORTHO05D005001 2.6e-238 828.6 487 84.2
Potri.004G075600 Populus trichocarpa HOM05D003643 ORTHO05D005001 7.8e-235 817.0 495 82.0
Dinv35809 Davidia involucrata HOM05D003643 ORTHO05D005001 1.0e-234 816.6 485 83.7
Cpa.g.sc178.8 Carica papaya HOM05D003643 ORTHO05D005001 6.6e-234 813.9 489 82.4
Phvul.L009001 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.1e-233 813.1 488 82.8
Eucgr.D01040 Eucalyptus grandis HOM05D003643 ORTHO05D005001 1.5e-233 812.8 494 82.6
Phvul.L001601 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 3.3e-233 811.6 488 82.6
Phvul.003G000252 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.3e-232 809.7 486 82.7
Glyma.20G021900 Glycine max HOM05D003643 ORTHO05D005001 6.9e-231 803.9 493 81.3
TWI77G0757 Tripterygium wilfordii HOM05D003643 ORTHO05D005001 1.5e-230 802.7 490 82.2
Glyma.07G222900 Glycine max HOM05D003643 ORTHO05D005001 4.5e-230 801.2 493 81.1
Prupe.4G109100 Prunus persica HOM05D003643 ORTHO05D005001 4.5e-230 801.2 486 81.7
CANSAT21G2447 Cannabis sativa HOM05D003643 ORTHO05D005001 5.8e-230 800.8 485 81.2
MD05G1254800 Malus domestica HOM05D003643 ORTHO05D005001 7.6e-230 800.4 485 81.4
PGR083G1065 Punica granatum HOM05D003643 ORTHO05D005001 1.3e-229 799.7 491 80.9
VMungo0251G0454 Vigna mungo HOM05D003643 ORTHO05D005001 3.8e-229 798.1 487 81.1
GSVIVG01012096001 Vitis vinifera HOM05D003643 ORTHO05D005001 3.8e-229 798.1 484 81.2
Actinidia22386 Actinidia chinensis HOM05D003643 ORTHO05D005001 4.2e-228 794.7 490 81.2
MD10G1234900 Malus domestica HOM05D003643 ORTHO05D005001 3.5e-227 791.6 496 79.2
Sabra04G0050300 Salix brachista HOM05D003643 ORTHO05D005001 5.1e-226 787.7 495 79.4
Lj1g0022937 Lotus japonicus HOM05D003643 ORTHO05D005001 8.7e-226 786.9 492 79.1
Lj1g0023184 Lotus japonicus HOM05D003643 ORTHO05D005001 2.5e-225 785.4 486 79.2
Oeu060347.1 Olea europaea HOM05D003643 ORTHO05D005001 2.5e-225 785.4 488 78.9
THA.LOC104822105 Tarenaya hassleriana HOM05D003643 ORTHO05D005001 9.6e-225 783.5 484 79.3
Lj1C1143T1 Lonicera japonica HOM05D003643 ORTHO05D005001 1.6e-224 782.7 494 78.9
CsaV3_1G046560 Cucumis sativus L. HOM05D003643 ORTHO05D005001 2.8e-224 781.9 486 80.9
Psat0s5231g0040 Pisum sativum HOM05D003643 ORTHO05D005001 6.2e-224 780.8 492 79.3
RcHm_v2.0_Chr5g0019781 Rosa chinensis HOM05D003643 ORTHO05D005001 6.2e-224 780.8 489 80.0
FvH4_3g12070 Fragaria vesca HOM05D003643 ORTHO05D005001 1.1e-223 780.0 489 79.8
Cc09_g06330 Coffea canephora HOM05D003643 ORTHO05D005001 3.1e-223 778.5 493 78.5
FAN21G1938 Fragaria x ananassa HOM05D003643 ORTHO05D005001 5.3e-223 777.7 489 79.3
CSS0044821 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 6.9e-223 777.3 492 78.3
Ca_18772_v3 Cicer arietinum L. HOM05D003643 ORTHO05D005001 4.5e-222 774.6 488 78.7
FAN25G0143 Fragaria x ananassa HOM05D003643 ORTHO05D005001 4.5e-222 774.6 489 79.1
TAR365G0076 Trochodendron aralioides HOM05D003643 ORTHO05D005001 5.8e-222 774.2 486 78.8
Sed0017297 Sechium edule HOM05D003643 ORTHO05D005001 7.6e-222 773.9 490 79.6
MELO3C021772.2 Cucumis melo HOM05D003643 ORTHO05D005001 3.8e-221 771.5 486 80.0
Gohir.D10G121400 Gossypium hirsutum HOM05D003643 ORTHO05D005001 3.8e-221 771.5 490 79.6
Gorai.011G133500 Gossypium raimondii HOM05D003643 ORTHO05D005001 3.8e-221 771.5 490 79.6
Psat6g043080 Pisum sativum HOM05D003643 ORTHO05D005001 8.4e-221 770.4 492 78.7
Thecc.04G162500 Theobroma cacao HOM05D003643 ORTHO05D005001 1.1e-220 770.0 493 79.5
BcaB01g04707 Brassica carinata HOM05D003643 ORTHO05D005001 1.4e-220 769.6 488 77.9
Lalb_Chr16g0385301 Lupinus albus HOM05D003643 ORTHO05D005001 4.2e-220 768.1 493 77.5
Sc22g0000430 Simmondsia chinensis HOM05D003643 ORTHO05D005001 1.6e-219 766.1 486 78.2
A10p18340 Brassica napus HOM05D003643 ORTHO05D005001 6.0e-219 764.2 491 77.4
BraA10t43914Z Brassica rapa HOM05D003643 ORTHO05D005001 6.0e-219 764.2 491 77.4
Carub.0006s2022 Capsella rubella HOM05D003643 ORTHO05D005001 7.9e-219 763.8 493 77.7
Thhalv10013358m.g Eutrema salsugineum HOM05D003643 ORTHO05D005001 1.3e-218 763.1 489 77.5
AT5G22480 Arabidopsis thaliana HOM05D003643 ORTHO05D005001 1.8e-218 762.7 493 77.3
Duzib268G1178 Durio zibethinus HOM05D003643 ORTHO05D005001 2.3e-218 762.3 495 77.4
Nitab4.5_0002056g0030 Nicotiana tabacum HOM05D003643 ORTHO05D005001 3.9e-218 761.5 490 77.6
SpUn0005_0160 Schrenkiella parvula HOM05D003643 ORTHO05D005001 5.1e-218 761.1 486 78.0
BcaC04g19578 Brassica carinata HOM05D003643 ORTHO05D005001 6.7e-218 760.8 485 77.5
vmacro11251 Vaccinium macrocarpon HOM05D003643 ORTHO05D005001 8.7e-218 760.4 510 76.1
C09p54110 Brassica napus HOM05D003643 ORTHO05D005001 1.1e-217 760.0 491 77.2
BolC9t58281H Brassica oleracea HOM05D003643 ORTHO05D005001 1.1e-217 760.0 491 77.2
AL7G45920 Arabidopsis lyrata HOM05D003643 ORTHO05D005001 1.5e-217 759.6 490 78.0
AT5G37340 Arabidopsis thaliana HOM05D003643 ORTHO05D005001 1.9e-217 759.2 489 77.9
BcaC01g06578 Brassica carinata HOM05D003643 ORTHO05D005001 1.9e-217 759.2 485 77.3
AL6G33500 Arabidopsis lyrata HOM05D003643 ORTHO05D005001 2.5e-217 758.8 486 78.0
A03p10790 Brassica napus HOM05D003643 ORTHO05D005001 2.5e-217 758.8 485 77.3
Thhalv10027733m.g Eutrema salsugineum HOM05D003643 ORTHO05D005001 3.3e-217 758.4 486 77.8
arahy.Tifrunner.gnm1.ann1.PVMC8E Arachis hypogaea HOM05D003643 ORTHO05D005001 7.4e-217 757.3 493 76.1
TPR.G20995 Trifolium pratense HOM05D003643 ORTHO05D005001 1.3e-216 756.5 489 76.9
CARHR215770 Cardamine hirsuta HOM05D003643 ORTHO05D005001 2.1e-216 755.7 486 77.6
BcaB08g36427 Brassica carinata HOM05D003643 ORTHO05D005001 3.7e-216 755.0 497 76.1
Lsat_1_v5_gn_5_36401 Lactuca sativa HOM05D003643 ORTHO05D005001 3.7e-216 755.0 480 77.3
Solyc02g069120.3 Solanum lycopersicum HOM05D003643 ORTHO05D005001 1.1e-215 753.4 490 75.7
PGSC0003DMG400010363 Solanum tuberosum HOM05D003643 ORTHO05D005001 5.3e-215 751.1 490 75.7
CAN.G1222.6 Capsicum annuum HOM05D003643 ORTHO05D005001 6.9e-215 750.7 490 76.3
Sopen02g018250 Solanum pennellii HOM05D003643 ORTHO05D005001 6.9e-215 750.7 490 75.5
HanXRQChr07g0189641 Helianthus annuus HOM05D003643 ORTHO05D005001 9.0e-215 750.4 480 76.7
Sp6g22770 Schrenkiella parvula HOM05D003643 ORTHO05D005001 9.0e-215 750.4 486 77.4
FAN16G1159 Fragaria x ananassa HOM05D003643 ORTHO05D005001 2.0e-214 749.2 489 77.5
Medtr4g083780 Medicago truncatula HOM05D003643 ORTHO05D005001 5.8e-214 747.7 490 76.5
Migut.M01969 Erythranthe guttata HOM05D003643 ORTHO05D005001 1.0e-213 746.9 482 77.6
A08p10150 Brassica napus HOM05D003643 ORTHO05D005001 1.7e-213 746.1 490 76.9
BraA03t10388Z Brassica rapa HOM05D003643 ORTHO05D005001 1.7e-213 746.1 496 75.2
BcaC07g37705 Brassica carinata HOM05D003643 ORTHO05D005001 2.9e-213 745.3 491 76.0
BolC3t13712H Brassica oleracea HOM05D003643 ORTHO05D005001 3.8e-213 745.0 488 76.2
BraA08t33014Z Brassica rapa HOM05D003643 ORTHO05D005001 3.8e-213 745.0 492 76.6
CARHR191050 Cardamine hirsuta HOM05D003643 ORTHO05D005001 3.8e-213 745.0 486 75.5
SGA_v2.0_scaffold298G47674 Striga asiatica HOM05D003643 ORTHO05D005001 4.9e-213 744.6 497 74.0
COL.COLO4_08070 Corchorus olitorius HOM05D003643 ORTHO05D005001 8.4e-213 743.8 531 72.5
BcaB04g18097 Brassica carinata HOM05D003643 ORTHO05D005001 1.9e-212 742.7 483 77.2
Rhsim04G0157300 Rhododendron simsii HOM05D003643 ORTHO05D005001 3.2e-212 741.9 520 74.6
HanXRQChr14g0433091 Helianthus annuus HOM05D003643 ORTHO05D005001 5.5e-212 741.1 482 76.1
ECA238G3555 Erigeron canadensis HOM05D003643 ORTHO05D005001 6.0e-211 737.6 483 74.9
SalBow8G4557 Salvia bowleyana HOM05D003643 ORTHO05D005001 4.3e-209 731.5 495 74.3
SalBow8G5428 Salvia bowleyana HOM05D003643 ORTHO05D005001 4.3e-209 731.5 495 74.3
Nn7g37591 Nelumbo nucifera HOM05D003643 ORTHO05D005001 1.1e-207 726.9 489 73.8
Lj1g0023481 Lotus japonicus HOM05D003643 ORTHO05D005001 9.0e-207 723.8 492 74.2
Oeu052674.3 Olea europaea HOM05D003643 ORTHO05D005001 1.3e-205 719.9 456 78.3
unitig_32.g11672 Utricularia gibba HOM05D003643 ORTHO05D005001 1.9e-204 716.1 492 73.0
arahy.Tifrunner.gnm1.ann1.EU78CH Arachis hypogaea HOM05D003643 ORTHO05D005001 7.2e-204 714.1 493 73.2
ECA246G0187 Erigeron canadensis HOM05D003643 ORTHO05D005001 1.2e-203 713.4 483 74.9
DCAR_007797 Daucus carota HOM05D003643 ORTHO05D005001 2.1e-203 712.6 496 73.0
AUR62010551 Chenopodium quinoa HOM05D003643 ORTHO05D005001 1.4e-202 709.9 485 72.0
CDE02G0779 Ceratophyllum demersum HOM05D003643 ORTHO05D005001 1.8e-202 709.5 487 72.1
Hund14697 Selenicereus undatus HOM05D003643 ORTHO05D005001 3.9e-202 708.4 504 70.8
ATR0743G136 Amborella trichopoda HOM05D003643 ORTHO05D005001 7.7e-198 694.1 492 70.1
Manes.01G122000 Manihot esculenta HOM05D003643 ORTHO05D005001 1.4e-196 689.9 493 72.8
SGA_v2.0_scaffold95G28766 Striga asiatica HOM05D003643 ORTHO05D005001 4.2e-196 688.3 515 68.5
Hund01937 Selenicereus undatus HOM05D003643 ORTHO05D005001 7.2e-196 687.6 485 70.3
Aa31LG9G17620 Aethionema arabicum HOM05D003643 ORTHO05D005001 1.2e-195 686.8 515 69.1
PSO675G9021 Papaver somniferum HOM05D003643 ORTHO05D005001 1.6e-195 686.4 494 69.2
MBI07_g18519_MAGBIO Magnolia biondii HOM05D003643 ORTHO05D005001 1.1e-193 680.2 493 70.2
Zm00001eb058120 Zea mays HOM05D003643 ORTHO05D005001 2.0e-193 679.5 486 68.7
HPP92_015903 Vanilla planifolia HOM05D003643 ORTHO05D005001 2.2e-192 676.0 486 69.3
EL10Ac5g12673 Beta vulgaris HOM05D003643 ORTHO05D005001 3.1e-191 672.2 570 63.2
AUR62017342 Chenopodium quinoa HOM05D003643 ORTHO05D005001 3.8e-189 665.2 585 59.7
Os08g0471900 Oryza sativa ssp. japonica HOM05D003643 ORTHO05D005001 1.9e-188 662.9 490 66.9
TPR.G20778 Trifolium pratense HOM05D003643 ORTHO05D005001 1.2e-187 660.2 491 68.2
Pp3c15_5070 Physcomitrium patens HOM05D003643 ORTHO05D005001 4.7e-187 658.3 493 64.5
TPR.G9485 Trifolium pratense HOM05D003643 ORTHO05D005001 4.4e-185 651.7 461 70.9
Lsat_1_v5_gn_2_29841 Lactuca sativa HOM05D003643 ORTHO05D005001 2.2e-184 649.4 491 68.0
Nitab4.5_0002463g0030 Nicotiana tabacum HOM05D003643 ORTHO05D005001 3.7e-184 648.7 488 69.7
Aqoxy5G01635 Aquilegia oxysepala HOM05D003643 ORTHO05D005001 5.9e-182 641.3 488 65.0
Mapoly0085s0072 Marchantia polymorpha HOM05D003643 ORTHO05D005001 1.0e-181 640.6 504 62.5
Peaxi162Scf00128g01142 Petunia axillaris HOM05D003643 ORTHO05D005001 1.3e-181 640.2 483 69.2
CSS0005005 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 1.9e-180 636.3 395 79.2
Ca_20206_v3 Cicer arietinum L. HOM05D003643 ORTHO05D005001 2.1e-179 632.9 486 65.8
Nitab4.5_0004569g0010 Nicotiana tabacum HOM05D003643 ORTHO05D005001 5.2e-170 601.7 497 65.2
QL07p008150 Quercus lobata HOM05D003643 ORTHO05D005001 1.3e-168 597.0 543 61.5
Phvul.003G000226 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 3.3e-164 582.4 350 82.9
Ciclev10003667m.g Citrus clementina HOM05D003643 ORTHO05D005001 2.1e-163 579.7 379 77.8
SMO203G0021 Selaginella moellendorffii HOM05D003643 ORTHO05D005001 4.0e-162 575.5 458 62.2
CBR_g6566 Chara braunii HOM05D003643 ORTHO05D005001 1.8e-159 566.6 523 56.0
ClCG01G009340 Citrullus lanatus HOM05D003643 ORTHO05D005001 5.0e-157 558.5 359 79.1
PSO017G1140 Papaver somniferum HOM05D003643 ORTHO05D005001 7.3e-156 554.7 394 70.6
CBR_g34896 Chara braunii HOM05D003643 ORTHO05D005001 2.3e-154 549.7 490 57.3
Phvul.002G099300 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.2e-153 547.4 389 73.8
Gohir.1Z049309 Gossypium hirsutum HOM05D003643 ORTHO05D005001 3.4e-153 545.8 362 77.3
Haze_13620 Corylus avellana HOM05D003643 ORTHO05D005001 1.6e-147 526.9 275 97.1
Ah.12g057940 Amaranthus hybridus HOM05D003643 ORTHO05D005001 6.2e-147 525.0 395 69.4
BolC8t48076H Brassica oleracea HOM05D003643 ORTHO05D005001 8.3e-144 514.6 368 72.3
Peaxi162Scf00149g01022 Petunia axillaris HOM05D003643 ORTHO05D005001 1.1e-138 497.7 357 72.5
Gohir.1Z049318 Gossypium hirsutum HOM05D003643 ORTHO05D005001 3.1e-130 469.5 310 78.1
Phvul.L001739 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.1e-127 461.1 397 63.7
CBR_g6568 Chara braunii HOM05D003643 ORTHO05D005001 4.6e-126 455.7 464 51.3
C03p12370 Brassica napus HOM05D003643 ORTHO05D005001 3.9e-125 452.6 301 75.4
Phvul.003G000330 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.1e-124 451.1 273 82.1
Phvul.003G000304 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.5e-124 450.7 281 80.1
Actinidia36045 Actinidia chinensis HOM05D003643 ORTHO05D005001 5.7e-92 342.4 233 73.4
Phvul.003G000278 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 2.4e-90 337.0 193 85.0
Atru.chr3.103 Acer truncatum HOM05D003643 ORTHO05D005001 4.2e-87 326.2 252 70.2
Cfa025656 Carpinus fangiana HOM05D003643 ORTHO05D005001 2.0e-84 317.4 479 39.2
Phvul.L008901 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.2e-78 298.1 171 84.2
DCAR_017792 Daucus carota HOM05D003643 ORTHO05D005001 8.2e-75 285.4 205 72.2
SEGI_34727 Sequoiadendron giganteum HOM05D003643 ORTHO05D005001 7.0e-66 255.8 200 65.0
Psat3g171960 Pisum sativum HOM05D003643 ORTHO05D005001 8.5e-56 222.2 233 53.6
BolC8t48075H Brassica oleracea HOM05D003643 ORTHO05D018815 1.9e-55 221.1 132 79.5
ClCG01G009350 Citrullus lanatus HOM05D003643 ORTHO05D005001 8.0e-54 215.7 126 83.3
Lsat_1_v5_gn_5_36361 Lactuca sativa HOM05D003643 ORTHO05D018815 8.0e-54 215.7 132 78.8
Atru.chr8.2696 Acer truncatum HOM05D003643 ORTHO05D005001 3.0e-53 213.8 296 48.3
Psat6g162200 Pisum sativum HOM05D003643 ORTHO05D005001 3.0e-53 213.8 258 48.1
Atru.chr8.2585 Acer truncatum HOM05D003643 ORTHO05D005001 6.8e-53 212.6 153 73.2
Peaxi162Scf00149g01017 Petunia axillaris HOM05D003643 ORTHO05D018815 8.6e-48 195.7 130 72.3
CSS0009011 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 1.2e-46 191.8 114 81.6
Phvul.L001639 Phaseolus vulgaris HOM05D003643 ORTHO05D034905 4.4e-44 183.3 99 84.8
Phvul.L008801 Phaseolus vulgaris HOM05D003643 ORTHO05D034905 4.4e-44 183.3 99 84.8
ATR0712G001 Amborella trichopoda HOM05D003643 ORTHO05D023464 4.5e-41 173.3 147 61.2
CSS0015856 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 1.0e-40 172.2 114 74.6
CBR_g12037 Chara braunii HOM05D003643 ORTHO05D005001 3.7e-35 153.7 205 44.4
Haze_13619 Corylus avellana HOM05D003643 ORTHO05D034905 8.6e-32 142.5 105 73.3
Haze_13621 Corylus avellana HOM05D003643 ORTHO05D018815 1.1e-26 125.6 65 95.4
Lsat_1_v5_gn_5_135000 Lactuca sativa HOM05D003643 ORTHO05D005001 2.1e-25 121.3 97 67.0
ClCG01G009330 Citrullus lanatus HOM05D003643 ORTHO05D018815 1.3e-24 118.6 64 85.9
Gohir.A10G145401 Gossypium hirsutum HOM05D003643 ORTHO05D018815 1.5e-23 115.2 62 85.5
Cc11_g00920 Coffea canephora HOM05D003643 ORTHO05D005001 9.5e-23 112.5 67 80.6
CSS0023685 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D018815 1.8e-21 108.2 67 76.1
CSS0030804 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 8.9e-21 105.9 65 80.0
Psat0s3903g0040 Pisum sativum HOM05D003643 ORTHO05D005001 4.4e-20 103.6 65 83.1
CSS0024414 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 7.6e-20 102.8 65 76.9
CSS0049868 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 2.2e-19 101.3 65 75.4
Lsat_1_v5_gn_5_54460 Lactuca sativa HOM05D003643 ORTHO05D005001 1.4e-18 98.6 189 36.5
CSS0012788 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 1.6e-17 95.1 77 66.2
CSS0032340 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D018815 1.2e-12 79.0 46 71.7
HanXRQChr06g0180401 Helianthus annuus HOM05D003643 ORTHO05D005001 1.9e-10 71.6 38 81.6
RcHm_v2.0_Chr5g0019801 Rosa chinensis HOM05D003643 ORTHO05D005001 3.6e-06 57.4 48 68.8
Zm00001eb170120 Zea mays HOM05D000137 ORTHO05D014725 6.2e-06 56.6 57 49.1
Zm00001eb388940 Zea mays HOM05D004043 ORTHO05D002193 6.2e-06 56.6 57 49.1


User provided reference genes

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