Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa023420 Carpinus fangiana HOM05D030367 ORTHO05D124184 0.0e+00 3929.4 2135 100.0
Pp3c18_5320 Physcomitrium patens HOM05D022432 ORTHO05D018354 3.7e-23 115.9 253 32.8
Mapoly0052s0063 Marchantia polymorpha HOM05D022432 ORTHO05D018354 6.6e-20 105.1 264 31.4
AagrBONN_evm.TU.Sc2ySwM_362.2492 Anthoceros agrestis HOM05D022432 ORTHO05D018354 1.4e-17 97.4 229 30.6
Cfa023186 Carpinus fangiana HOM05D030367 ORTHO05D018354 1.7e-12 80.5 247 26.3
Prupe.5G019200 Prunus persica HOM05D000759 ORTHO05D000574 1.1e-11 77.8 441 22.4
Lj4g0013729 Lotus japonicus HOM05D000759 ORTHO05D000574 2.5e-11 76.6 426 21.8
DCAR_016584 Daucus carota HOM05D000759 ORTHO05D000574 4.3e-11 75.9 440 21.8
FvH4_5g24110 Fragaria vesca HOM05D000759 ORTHO05D000574 5.6e-11 75.5 436 22.2
RcHm_v2.0_Chr7g0213641 Rosa chinensis HOM05D000759 ORTHO05D000574 7.3e-11 75.1 436 22.5
Os02g0794900 Oryza sativa ssp. japonica HOM05D000759 ORTHO05D000574 9.5e-11 74.7 405 20.7
Dinv42866 Davidia involucrata HOM05D000759 ORTHO05D000574 1.6e-10 73.9 420 21.7
Dinv43234 Davidia involucrata HOM05D000759 ORTHO05D000574 1.6e-10 73.9 420 21.7
Mapoly0063s0047 Marchantia polymorpha HOM05D000359 ORTHO05D000574 2.1e-10 73.6 455 22.4
CiPaw.12G011600 Carya illinoinensis HOM05D000759 ORTHO05D000574 2.8e-10 73.2 433 22.6
Cfa019279 Carpinus fangiana HOM05D000759 ORTHO05D000574 4.7e-10 72.4 444 22.7
CBR_g37581 Chara braunii HOM05D000759 ORTHO05D000574 6.2e-10 72.0 467 23.3
FAN04G0302 Fragaria x ananassa HOM05D000759 ORTHO05D000574 8.1e-10 71.6 447 21.9
PGR102G2457 Punica granatum HOM05D000759 ORTHO05D000574 1.4e-09 70.9 429 21.7
Atru.chr9.324 Acer truncatum HOM05D000759 ORTHO05D000574 1.8e-09 70.5 444 21.4
Cfa022342 Carpinus fangiana HOM05D030367 ORTHO05D018354 4.0e-09 69.3 210 25.2
HanXRQChr05g0148691 Helianthus annuus HOM05D000759 ORTHO05D000574 6.8e-09 68.6 436 20.4
HanXRQChr10g0313731 Helianthus annuus HOM05D000759 ORTHO05D000574 1.2e-08 67.8 451 21.7
QL10p017923 Quercus lobata HOM05D000759 ORTHO05D000574 2.6e-08 66.6 444 21.8
Ah.11g048170 Amaranthus hybridus HOM05D000759 ORTHO05D000574 4.4e-08 65.9 456 23.5
Nn8g39868 Nelumbo nucifera HOM05D000759 ORTHO05D000574 5.8e-08 65.5 450 20.9
CiPaw.11G047900 Carya illinoinensis HOM05D000759 ORTHO05D000574 7.6e-08 65.1 385 23.1
Dinv40975 Davidia involucrata HOM05D000759 ORTHO05D000574 7.6e-08 65.1 464 20.3
FAN13G0726 Fragaria x ananassa HOM05D000759 ORTHO05D000574 2.2e-07 63.5 436 20.9
Lsat_1_v5_gn_5_56320 Lactuca sativa HOM05D000759 ORTHO05D000574 2.2e-07 63.5 414 21.3
CBR_g627 Chara braunii HOM05D022432 ORTHO05D018354 3.8e-07 62.8 324 26.5
MSTRG.11766 Avicennia marina HOM05D000759 ORTHO05D000574 4.9e-07 62.4 422 20.4
CBR_g54336 Chara braunii HOM05D022432 ORTHO05D018354 8.4e-07 61.6 253 26.1
ATR0739G179 Amborella trichopoda HOM05D000759 ORTHO05D000574 1.4e-06 60.8 431 20.4
Aa31LG2G14280 Aethionema arabicum HOM05D000759 ORTHO05D000574 3.2e-06 59.7 365 20.5
Cfa022554 Carpinus fangiana HOM05D030367 ORTHO05D018354 4.1e-06 59.3 252 26.6


User provided reference genes

Program Settings