Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa023409 Carpinus fangiana HOM05D006002 ORTHO05D126491 7.1e-220 766.9 377 100.0
AagrBONN_evm.TU.Sc2ySwM_344.4971 Anthoceros agrestis HOM05D006002 ORTHO05D007651 8.9e-13 79.0 201 32.3
SGA_v2.0_scaffold7G03564 Striga asiatica HOM05D006002 ORTHO05D007651 1.2e-12 78.6 235 29.8
TWI53G1943 Tripterygium wilfordii HOM05D006002 ORTHO05D007651 1.7e-11 74.7 237 29.1
QL04p088541 Quercus lobata HOM05D006002 ORTHO05D007651 4.9e-11 73.2 237 29.1
QL04p088993 Quercus lobata HOM05D006002 ORTHO05D007651 4.9e-11 73.2 237 29.1
Cc05_g15870 Coffea canephora HOM05D006002 ORTHO05D007651 1.1e-10 72.0 230 31.7
TAR627G1081 Trochodendron aralioides HOM05D006002 ORTHO05D007651 1.1e-10 72.0 231 29.0
SalBow8G1862 Salvia bowleyana HOM05D006002 ORTHO05D007651 1.4e-10 71.6 230 29.6
VMungo1080G0998 Vigna mungo HOM05D001395 ORTHO05D002039 1.4e-10 71.6 180 32.2
Os12g0612500 Oryza sativa ssp. japonica HOM05D006002 ORTHO05D007651 1.9e-10 71.2 236 29.2
Psat3g026200 Pisum sativum HOM05D006002 ORTHO05D007651 1.9e-10 71.2 231 29.0
vmacro09790 Vaccinium macrocarpon HOM05D006002 ORTHO05D007651 2.4e-10 70.9 237 29.1
HPP92_001894 Vanilla planifolia HOM05D006002 ORTHO05D004222 2.4e-10 70.9 235 30.6
GSVIVG01020461001 Vitis vinifera HOM05D006002 ORTHO05D007651 2.4e-10 70.9 201 29.9
CSS0008604 Camellia sinensis var. sinensis HOM05D006002 ORTHO05D007651 3.2e-10 70.5 182 31.3
Lj3g0018048 Lotus japonicus HOM05D006002 ORTHO05D007651 3.2e-10 70.5 227 30.0
arahy.Tifrunner.gnm1.ann1.0RH0I3 Arachis hypogaea HOM05D006002 ORTHO05D007651 4.1e-10 70.1 232 28.0
arahy.Tifrunner.gnm1.ann1.HWL53Q Arachis hypogaea HOM05D006002 ORTHO05D007651 4.1e-10 70.1 232 28.0
CDE02G2905 Ceratophyllum demersum HOM05D006002 ORTHO05D007651 4.1e-10 70.1 245 28.6
Hma1.2p1_0193F.1_g084460 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 4.1e-10 70.1 180 30.0
Hma1.2p1_0193F.1_g084470 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 4.1e-10 70.1 180 30.0
Lj8A185G55 Lonicera japonica HOM05D006002 ORTHO05D007651 4.1e-10 70.1 187 29.9
ECA236G2913 Erigeron canadensis HOM05D006002 ORTHO05D007651 5.4e-10 69.7 228 29.8
Rhsim04G0006400 Rhododendron simsii HOM05D006002 ORTHO05D007651 5.4e-10 69.7 180 31.1
ATR0165G036 Amborella trichopoda HOM05D006002 ORTHO05D007651 9.2e-10 68.9 191 31.4
Lalb_Chr25g0284701 Lupinus albus HOM05D006002 ORTHO05D007651 9.2e-10 68.9 201 29.9
Actinidia37107 Actinidia chinensis HOM05D006002 ORTHO05D007651 1.2e-09 68.6 204 30.4
Ah.04g163380 Amaranthus hybridus HOM05D006002 ORTHO05D007651 1.2e-09 68.6 180 31.7
Solyc07g066280.3 Solanum lycopersicum HOM05D006002 ORTHO05D007651 1.2e-09 68.6 241 29.5
Phvul.005G050900 Phaseolus vulgaris HOM05D006002 ORTHO05D007651 1.6e-09 68.2 180 31.7
Sabra03G0164800 Salix brachista HOM05D006002 ORTHO05D007651 1.6e-09 68.2 180 30.6
CiPaw.11G062100 Carya illinoinensis HOM05D006002 ORTHO05D007651 2.1e-09 67.8 201 30.3
Manes.03G102600 Manihot esculenta HOM05D006002 ORTHO05D007651 2.1e-09 67.8 235 28.9
Pp3c1_22930 Physcomitrium patens HOM05D006002 ORTHO05D007651 2.1e-09 67.8 223 30.0
Ca_09098_v3 Cicer arietinum L. HOM05D006002 ORTHO05D007651 2.7e-09 67.4 180 30.0
Medtr7g107330 Medicago truncatula HOM05D006002 ORTHO05D007651 2.7e-09 67.4 231 28.1
Nn3g20175 Nelumbo nucifera HOM05D006002 ORTHO05D007651 3.5e-09 67.0 237 27.8
CBR_g8978 Chara braunii HOM05D006002 ORTHO05D007651 4.6e-09 66.6 197 29.4
Ciclev10020646m.g Citrus clementina HOM05D006002 ORTHO05D007651 4.6e-09 66.6 180 31.1
Lsat_1_v5_gn_7_116060 Lactuca sativa HOM05D006002 ORTHO05D007651 4.6e-09 66.6 239 28.5
FAN25G3512 Fragaria x ananassa HOM05D006002 ORTHO05D007651 6.0e-09 66.2 181 29.3
Glyma.08G167200 Glycine max HOM05D006002 ORTHO05D007651 6.0e-09 66.2 180 30.6
Nitab4.5_0001235g0050 Nicotiana tabacum HOM05D006002 ORTHO05D007651 6.0e-09 66.2 234 29.5
COL.COLO4_25103 Corchorus olitorius HOM05D006002 ORTHO05D007651 7.8e-09 65.9 237 30.4
HanXRQChr11g0335201 Helianthus annuus HOM05D006002 ORTHO05D007651 1.0e-08 65.5 180 30.6
Sopen07g034460 Solanum pennellii HOM05D006002 ORTHO05D007651 1.0e-08 65.5 241 29.0
Aa31LG1G17780 Aethionema arabicum HOM05D006002 ORTHO05D007651 1.3e-08 65.1 180 30.0
Potri.003G221400 Populus trichocarpa HOM05D006002 ORTHO05D007651 1.3e-08 65.1 180 29.4
Hund02296 Selenicereus undatus HOM05D006002 ORTHO05D007651 1.3e-08 65.1 180 31.7
FAN11G0453 Fragaria x ananassa HOM05D006002 ORTHO05D007651 1.7e-08 64.7 181 29.3
Glyma.15G260100 Glycine max HOM05D006002 ORTHO05D007651 1.7e-08 64.7 180 29.4
Aqoxy1G01586 Aquilegia oxysepala HOM05D006002 ORTHO05D007651 2.3e-08 64.3 180 29.4
Eucgr.F01442 Eucalyptus grandis HOM05D006002 ORTHO05D007651 2.3e-08 64.3 241 27.0
Mapoly0051s0043 Marchantia polymorpha HOM05D006002 ORTHO05D007651 2.3e-08 64.3 201 30.3
Carub.0008s2494 Capsella rubella HOM05D006002 ORTHO05D007651 3.9e-08 63.5 180 30.6
FvH4_3g16091 Fragaria vesca HOM05D006002 ORTHO05D007651 3.9e-08 63.5 181 28.7
SMO145G0236 Selaginella moellendorffii HOM05D006002 ORTHO05D007651 3.9e-08 63.5 183 29.0
THA.LOC104819332 Tarenaya hassleriana HOM05D006002 ORTHO05D007651 3.9e-08 63.5 198 29.3
FAN16G0275 Fragaria x ananassa HOM05D006002 ORTHO05D007651 5.1e-08 63.2 181 28.7
QL03p043202 Quercus lobata HOM05D006002 ORTHO05D007651 5.1e-08 63.2 242 27.7
Sed0002243 Sechium edule HOM05D006002 ORTHO05D007651 5.1e-08 63.2 180 28.9
AL8G41420 Arabidopsis lyrata HOM05D006002 ORTHO05D007651 6.6e-08 62.8 180 29.4
Haze_07820 Corylus avellana HOM05D006002 ORTHO05D007651 6.6e-08 62.8 237 27.4
Eucgr.F01438 Eucalyptus grandis HOM05D006002 ORTHO05D007651 6.6e-08 62.8 180 29.4
MBI02_g43301_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 6.6e-08 62.8 180 29.4
CAN.G943.23 Capsicum annuum HOM05D006002 ORTHO05D007651 8.6e-08 62.4 241 28.6
MD10G1197800 Malus domestica HOM05D006002 ORTHO05D007651 8.6e-08 62.4 181 28.2
PSO675G3741 Papaver somniferum HOM05D006002 ORTHO05D007651 8.6e-08 62.4 181 29.8
Prupe.4G144100 Prunus persica HOM05D006002 ORTHO05D007651 1.1e-07 62.0 181 29.8
Sp2g27210 Schrenkiella parvula HOM05D006002 ORTHO05D007651 1.1e-07 62.0 231 28.6
unitig_748.g7639 Utricularia gibba HOM05D006002 ORTHO05D007651 1.1e-07 62.0 181 28.2
AT5G64150 Arabidopsis thaliana HOM05D006002 ORTHO05D007651 1.5e-07 61.6 181 29.8
BcaC01g02672 Brassica carinata HOM05D006002 ORTHO05D007651 1.5e-07 61.6 180 29.4
MELO3C010553.2 Cucumis melo HOM05D006002 ORTHO05D007651 1.5e-07 61.6 180 28.3
CsaV3_2G022200 Cucumis sativus L. HOM05D006002 ORTHO05D007651 1.5e-07 61.6 180 28.3
C03p62100 Brassica napus HOM05D006002 ORTHO05D007651 1.9e-07 61.2 180 28.9
BolC3t18471H Brassica oleracea HOM05D006002 ORTHO05D007651 1.9e-07 61.2 180 29.4
PGR083G2675 Punica granatum HOM05D006002 ORTHO05D007651 1.9e-07 61.2 204 30.4
RcHm_v2.0_Chr5g0027061 Rosa chinensis HOM05D006002 ORTHO05D007651 2.5e-07 60.8 181 27.1
MSTRG.16122 Avicennia marina HOM05D006002 ORTHO05D007651 3.3e-07 60.5 180 28.9
CARHR278060 Cardamine hirsuta HOM05D006002 ORTHO05D007651 4.3e-07 60.1 180 28.9
A06p30870 Brassica napus HOM05D006002 ORTHO05D007651 5.6e-07 59.7 231 27.3
BcaB02g09782 Brassica carinata HOM05D006002 ORTHO05D007651 9.6e-07 58.9 180 27.8
BraA06t26026Z Brassica rapa HOM05D006002 ORTHO05D007651 9.6e-07 58.9 231 26.8
ClCG11G016270 Citrullus lanatus HOM05D006002 ORTHO05D007651 9.6e-07 58.9 180 27.2
Nitab4.5_0000294g0110 Nicotiana tabacum HOM05D006002 ORTHO05D007651 9.6e-07 58.9 180 30.0
PSO541G1619 Papaver somniferum HOM05D006002 ORTHO05D007651 9.6e-07 58.9 181 28.7
Peaxi162Scf00232g00102 Petunia axillaris HOM05D006002 ORTHO05D007651 9.6e-07 58.9 180 30.6
TPR.G18376 Trifolium pratense HOM05D006002 ORTHO05D007651 9.6e-07 58.9 106 34.0
CANSAT56G1259 Cannabis sativa HOM05D006002 ORTHO05D007651 1.2e-06 58.5 185 28.1
Thhalv10004403m.g Eutrema salsugineum HOM05D006002 ORTHO05D007651 1.2e-06 58.5 181 29.3
PGSC0003DMG400022243 Solanum tuberosum HOM05D006002 ORTHO05D007651 2.1e-06 57.8 181 29.8
SEGI_37419 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 3.6e-06 57.0 183 27.9
Sc03g0007860 Simmondsia chinensis HOM05D006002 ORTHO05D007651 3.6e-06 57.0 181 29.8
QL04p062372 Quercus lobata HOM05D006002 ORTHO05D007651 4.7e-06 56.6 127 32.3
Actinidia35439 Actinidia chinensis HOM05D006002 ORTHO05D007651 6.2e-06 56.2 122 32.0
Gohir.A05G076100 Gossypium hirsutum HOM05D006002 ORTHO05D007651 6.2e-06 56.2 183 29.5


User provided reference genes

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