Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa023372 Carpinus fangiana HOM05D000646 ORTHO05D028654 0.0e+00 1558.1 755 100.0
Pp3s42_140 Physcomitrium patens HOM05D000646 ORTHO05D028654 2.6e-253 879.0 729 60.6
PRCOL_00003218 Prasinoderma coloniale HOM05D000646 ORTHO05D028654 3.4e-197 692.6 707 51.9
Cre01.g045700 Chlamydomonas reinhardtii HOM05D000646 ORTHO05D028654 6.0e-117 426.0 738 39.2
MCO03G155 Micromonas commoda HOM05D000646 ORTHO05D000607 3.7e-10 71.2 97 41.2
BcaNung00775 Brassica carinata HOM05D000646 ORTHO05D000607 7.0e-09 67.0 202 28.2
C01p03040 Brassica napus HOM05D000646 ORTHO05D000607 9.2e-09 66.6 202 28.2
BolC1t00290H Brassica oleracea HOM05D000646 ORTHO05D000607 9.2e-09 66.6 202 28.2
A01p02740 Brassica napus HOM05D000646 ORTHO05D000607 1.2e-08 66.2 202 28.2
BraA01t00260Z Brassica rapa HOM05D000646 ORTHO05D000607 1.2e-08 66.2 202 28.2
BcaNung00776 Brassica carinata HOM05D000646 ORTHO05D000607 2.7e-08 65.1 202 28.2
CARHR244360 Cardamine hirsuta HOM05D000646 ORTHO05D000607 7.8e-08 63.5 202 27.7
VMungo1215G1313 Vigna mungo HOM05D000646 ORTHO05D000607 1.0e-07 63.2 148 33.1
Cre09.g401886 Chlamydomonas reinhardtii HOM05D000646 ORTHO05D000607 1.3e-07 62.8 252 27.4
vmacro14483 Vaccinium macrocarpon HOM05D000646 ORTHO05D000607 1.3e-07 62.8 92 42.4
AUR62003342 Chenopodium quinoa HOM05D000646 ORTHO05D000607 1.7e-07 62.4 122 33.6
SalBow3G0133 Salvia bowleyana HOM05D000646 ORTHO05D000607 2.3e-07 62.0 96 42.7
AL7G16220 Arabidopsis lyrata HOM05D000646 ORTHO05D000607 3.0e-07 61.6 303 26.1
AT4G35970 Arabidopsis thaliana HOM05D000646 ORTHO05D000607 3.0e-07 61.6 202 27.2
AUR62043595 Chenopodium quinoa HOM05D000646 ORTHO05D000607 3.0e-07 61.6 122 33.6
Hma1.2p1_0407F.1_g146230 Hydrangea macrophylla HOM05D000646 ORTHO05D000607 3.0e-07 61.6 90 44.4
Sc16g0002000 Simmondsia chinensis HOM05D000646 ORTHO05D000607 3.0e-07 61.6 142 33.8
THA.LOC104804273 Tarenaya hassleriana HOM05D000646 ORTHO05D000607 3.0e-07 61.6 203 28.1
Lj2A106T35 Lonicera japonica HOM05D000646 ORTHO05D000607 3.9e-07 61.2 113 38.1
unitig_46.g18489 Utricularia gibba HOM05D000646 ORTHO05D000607 3.9e-07 61.2 268 28.4
CiPaw.09G180800 Carya illinoinensis HOM05D000646 ORTHO05D000607 5.0e-07 60.8 119 37.0
Haze_03745 Corylus avellana HOM05D000646 ORTHO05D000607 5.0e-07 60.8 124 33.1
SEGI_28966 Sequoiadendron giganteum HOM05D000646 ORTHO05D000607 5.0e-07 60.8 99 41.4
Sc21g0000140 Simmondsia chinensis HOM05D000646 ORTHO05D000607 5.0e-07 60.8 92 43.5
AL7G15080 Arabidopsis lyrata HOM05D000646 ORTHO05D000607 6.6e-07 60.5 202 26.7
Ciclev10012554m.g Citrus clementina HOM05D000646 ORTHO05D000607 6.6e-07 60.5 93 43.0
Ciclev10030198m.g Citrus clementina HOM05D000646 ORTHO05D000607 6.6e-07 60.5 137 36.5
DCAR_018843 Daucus carota HOM05D000646 ORTHO05D000607 6.6e-07 60.5 93 41.9
Thhalv10025942m.g Eutrema salsugineum HOM05D000646 ORTHO05D000607 6.6e-07 60.5 202 27.2
Manes.01G147300 Manihot esculenta HOM05D000646 ORTHO05D000607 6.6e-07 60.5 231 27.3
PRCOL_00002864 Prasinoderma coloniale HOM05D000646 ORTHO05D022254 6.6e-07 60.5 87 39.1
HanXRQChr08g0229951 Helianthus annuus HOM05D000646 ORTHO05D000607 8.6e-07 60.1 116 35.3
Lj2g0020786 Lotus japonicus HOM05D000646 ORTHO05D000607 8.6e-07 60.1 202 29.7
Oeu001528.1 Olea europaea HOM05D000646 ORTHO05D000607 8.6e-07 60.1 151 27.2
PGR102G0301 Punica granatum HOM05D000646 ORTHO05D000607 8.6e-07 60.1 202 28.2
Sp7g33740 Schrenkiella parvula HOM05D000646 ORTHO05D000607 8.6e-07 60.1 202 27.2
SEGI_27836 Sequoiadendron giganteum HOM05D000646 ORTHO05D000607 8.6e-07 60.1 95 42.1
arahy.Tifrunner.gnm1.ann1.ZB3H4T Arachis hypogaea HOM05D000646 ORTHO05D000607 1.1e-06 59.7 119 36.1
CARHR243280 Cardamine hirsuta HOM05D000646 ORTHO05D000607 1.1e-06 59.7 212 27.8
CDE04G1386 Ceratophyllum demersum HOM05D000646 ORTHO05D000607 1.1e-06 59.7 119 35.3
DCAR_000433 Daucus carota HOM05D000646 ORTHO05D000607 1.1e-06 59.7 92 44.6
DCAR_015567 Daucus carota HOM05D000646 ORTHO05D000607 1.1e-06 59.7 92 44.6
Duzib106G1286 Durio zibethinus HOM05D000646 ORTHO05D000607 1.1e-06 59.7 96 41.7
Gorai.009G420500 Gossypium raimondii HOM05D000646 ORTHO05D000607 1.1e-06 59.7 96 40.6
Nitab4.5_0000270g0080 Nicotiana tabacum HOM05D000646 ORTHO05D000607 1.1e-06 59.7 92 43.5
Nitab4.5_0000372g0040 Nicotiana tabacum HOM05D000646 ORTHO05D000607 1.1e-06 59.7 92 43.5
Os08g0549100 Oryza sativa ssp. japonica HOM05D000646 ORTHO05D000607 1.1e-06 59.7 90 42.2
Rhsim01G0221600 Rhododendron simsii HOM05D000646 ORTHO05D000607 1.1e-06 59.7 89 43.8
Actinidia00816 Actinidia chinensis HOM05D000646 ORTHO05D000607 1.5e-06 59.3 93 41.9
Aa31LG8G13960 Aethionema arabicum HOM05D000646 ORTHO05D000607 1.5e-06 59.3 130 33.8
Cpa.g.c30593 Carica papaya HOM05D000646 ORTHO05D000607 1.5e-06 59.3 202 28.7
Lsat_1_v5_gn_9_20460 Lactuca sativa HOM05D000646 ORTHO05D000607 1.5e-06 59.3 119 37.0
Migut.N02635 Erythranthe guttata HOM05D000646 ORTHO05D000607 1.9e-06 58.9 92 42.4
Manes.11G139700 Manihot esculenta HOM05D000646 ORTHO05D000607 1.9e-06 58.9 89 43.8
Medtr5g022510 Medicago truncatula HOM05D000646 ORTHO05D000607 1.9e-06 58.9 124 33.1
Prupe.6G091600 Prunus persica HOM05D000646 ORTHO05D000607 1.9e-06 58.9 89 44.9
Sc20g0004160 Simmondsia chinensis HOM05D000646 ORTHO05D000607 1.9e-06 58.9 97 40.2
Atru.chr3.850 Acer truncatum HOM05D000646 ORTHO05D000607 2.5e-06 58.5 196 30.6
MSTRG.17856 Avicennia marina HOM05D000646 ORTHO05D000607 2.5e-06 58.5 124 35.5
CAN.G200.10 Capsicum annuum HOM05D000646 ORTHO05D000607 2.5e-06 58.5 89 42.7
Haze_20662 Corylus avellana HOM05D000646 ORTHO05D000607 2.5e-06 58.5 92 42.4
Eucgr.B02456 Eucalyptus grandis HOM05D000646 ORTHO05D000607 2.5e-06 58.5 202 28.2
HanXRQChr05g0133141 Helianthus annuus HOM05D000646 ORTHO05D000607 2.5e-06 58.5 92 42.4
Lj2A1040T27 Lonicera japonica HOM05D000646 ORTHO05D000607 2.5e-06 58.5 92 43.5
Manes.04G026800 Manihot esculenta HOM05D000646 ORTHO05D000607 2.5e-06 58.5 89 43.8
Oeu038933.1 Olea europaea HOM05D000646 ORTHO05D000607 2.5e-06 58.5 92 40.2
Peaxi162Scf00072g00222 Petunia axillaris HOM05D000646 ORTHO05D000607 2.5e-06 58.5 92 42.4
Prupe.6G242200 Prunus persica HOM05D000646 ORTHO05D000607 2.5e-06 58.5 96 41.7
Sabra16G0091600 Salix brachista HOM05D000646 ORTHO05D000607 2.5e-06 58.5 103 39.8
Hund01392 Selenicereus undatus HOM05D000646 ORTHO05D000607 2.5e-06 58.5 91 40.7
Aa31LG4G7500 Aethionema arabicum HOM05D000646 ORTHO05D000607 3.3e-06 58.2 98 35.7
MELO3C020719.2 Cucumis melo HOM05D000646 ORTHO05D000607 3.3e-06 58.2 89 42.7
CsaV3_1G033510 Cucumis sativus L. HOM05D000646 ORTHO05D000607 3.3e-06 58.2 89 42.7
FvH4_6g15200 Fragaria vesca HOM05D000646 ORTHO05D000607 3.3e-06 58.2 97 40.2
FAN09G2226 Fragaria x ananassa HOM05D000646 ORTHO05D000607 3.3e-06 58.2 97 40.2
FAN14G0030 Fragaria x ananassa HOM05D000646 ORTHO05D000607 3.3e-06 58.2 97 40.2
Mapoly0030s0090 Marchantia polymorpha HOM05D000646 ORTHO05D000607 3.3e-06 58.2 103 35.9
Potri.016G084800 Populus trichocarpa HOM05D000646 ORTHO05D000607 3.3e-06 58.2 93 40.9
QL06p051040 Quercus lobata HOM05D000646 ORTHO05D000607 3.3e-06 58.2 202 26.7
RcHm_v2.0_Chr3g0468551 Rosa chinensis HOM05D000646 ORTHO05D000607 3.3e-06 58.2 97 39.2
PGSC0003DMG400030056 Solanum tuberosum HOM05D000646 ORTHO05D000607 3.3e-06 58.2 89 43.8
Thecc.05G053200 Theobroma cacao HOM05D000646 ORTHO05D000607 3.3e-06 58.2 96 40.6
Aqoxy6G02195 Aquilegia oxysepala HOM05D000646 ORTHO05D000607 4.3e-06 57.8 119 33.6
AT4G35000 Arabidopsis thaliana HOM05D000646 ORTHO05D000607 4.3e-06 57.8 302 26.2
arahy.Tifrunner.gnm1.ann1.0JX7DD Arachis hypogaea HOM05D000646 ORTHO05D000607 4.3e-06 57.8 242 25.6
arahy.Tifrunner.gnm1.ann1.E4JY0M Arachis hypogaea HOM05D000646 ORTHO05D000607 4.3e-06 57.8 242 25.6
Eucgr.J02463 Eucalyptus grandis HOM05D000646 ORTHO05D000607 4.3e-06 57.8 268 27.2
FAN02G3303 Fragaria x ananassa HOM05D000646 ORTHO05D000607 4.3e-06 57.8 97 39.2
Manes.08G002700 Manihot esculenta HOM05D000646 ORTHO05D000607 4.3e-06 57.8 202 28.7
PGSC0003DMG400030063 Solanum tuberosum HOM05D000646 ORTHO05D000607 4.3e-06 57.8 116 36.2
Aa31LG6G12920 Aethionema arabicum HOM05D000646 ORTHO05D000607 5.6e-06 57.4 202 26.7
MSTRG.12616 Avicennia marina HOM05D000646 ORTHO05D000607 5.6e-06 57.4 92 39.1
Carub.0007s0426 Capsella rubella HOM05D000646 ORTHO05D000607 5.6e-06 57.4 202 25.7
CBR_g30060 Chara braunii HOM05D000646 ORTHO05D000607 5.6e-06 57.4 92 40.2
Nitab4.5_0011292g0010 Nicotiana tabacum HOM05D000646 ORTHO05D000607 5.6e-06 57.4 92 41.3
Oeu029548.1 Olea europaea HOM05D000646 ORTHO05D000607 5.6e-06 57.4 97 40.2
Phvul.002G107000 Phaseolus vulgaris HOM05D000646 ORTHO05D000607 5.6e-06 57.4 93 40.9
Potri.006G132200 Populus trichocarpa HOM05D000646 ORTHO05D000607 5.6e-06 57.4 93 41.9
QL07p045384 Quercus lobata HOM05D000646 ORTHO05D000607 5.6e-06 57.4 92 41.3
QL11p050032 Quercus lobata HOM05D000646 ORTHO05D000607 5.6e-06 57.4 196 28.1
SGA_v2.0_scaffold316G48411 Striga asiatica HOM05D000646 ORTHO05D000607 5.6e-06 57.4 92 40.2
THA.LOC104826354 Tarenaya hassleriana HOM05D000646 ORTHO05D000607 5.6e-06 57.4 89 42.7
Aqoxy2G01884 Aquilegia oxysepala HOM05D000646 ORTHO05D000607 7.3e-06 57.0 89 42.7
CANSAT54G2354 Cannabis sativa HOM05D000646 ORTHO05D000607 7.3e-06 57.0 229 27.1
CANSAT80G2772 Cannabis sativa HOM05D000646 ORTHO05D000607 7.3e-06 57.0 92 41.3
Eucgr.A01180 Eucalyptus grandis HOM05D000646 ORTHO05D000607 7.3e-06 57.0 96 40.6
Eucgr.J00965 Eucalyptus grandis HOM05D000646 ORTHO05D000607 7.3e-06 57.0 89 42.7
Gorai.003G008200 Gossypium raimondii HOM05D000646 ORTHO05D000607 7.3e-06 57.0 124 30.6
SalBow5G5151 Salvia bowleyana HOM05D000646 ORTHO05D000607 7.3e-06 57.0 202 26.7
Sed0004709 Sechium edule HOM05D000646 ORTHO05D000607 7.3e-06 57.0 117 35.0
Hund14060 Selenicereus undatus HOM05D000646 ORTHO05D000607 7.3e-06 57.0 124 33.9
unitig_22.g6672 Utricularia gibba HOM05D000646 ORTHO05D000607 7.3e-06 57.0 92 43.5
vmacro22149 Vaccinium macrocarpon HOM05D000646 ORTHO05D000607 7.3e-06 57.0 124 32.3
HPP92_017939 Vanilla planifolia HOM05D000646 ORTHO05D000607 7.3e-06 57.0 89 42.7
EL10Ac9g22399 Beta vulgaris HOM05D000646 ORTHO05D000607 9.5e-06 56.6 93 40.9
Carub.0007s0531 Capsella rubella HOM05D000646 ORTHO05D000607 9.5e-06 56.6 177 30.5
Cc06_g03490 Coffea canephora HOM05D000646 ORTHO05D000607 9.5e-06 56.6 96 42.7
Thhalv10022797m.g Eutrema salsugineum HOM05D000646 ORTHO05D000607 9.5e-06 56.6 195 29.7
Glyma.11G078400 Glycine max HOM05D000646 ORTHO05D000607 9.5e-06 56.6 93 38.7
Glyma.11G107200 Glycine max HOM05D000646 ORTHO05D000607 9.5e-06 56.6 119 34.5
Glyma.12G032300 Glycine max HOM05D000646 ORTHO05D000607 9.5e-06 56.6 119 34.5
Gohir.D03G008000 Gossypium hirsutum HOM05D000646 ORTHO05D000607 9.5e-06 56.6 285 24.9
Pp3c1_40650 Physcomitrium patens HOM05D000646 ORTHO05D000607 9.5e-06 56.6 337 25.8
Psat5g086720 Pisum sativum HOM05D000646 ORTHO05D000607 9.5e-06 56.6 114 36.0
PGR004G2804 Punica granatum HOM05D000646 ORTHO05D000607 9.5e-06 56.6 206 27.7
Sp7g32760 Schrenkiella parvula HOM05D000646 ORTHO05D000607 9.5e-06 56.6 211 29.4
Sed0021051 Sechium edule HOM05D000646 ORTHO05D000607 9.5e-06 56.6 124 31.5
TWI79G0557 Tripterygium wilfordii HOM05D000646 ORTHO05D000607 9.5e-06 56.6 89 42.7


User provided reference genes

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