Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa023167 Carpinus fangiana HOM05D002632 ORTHO05D002881 0.0e+00 1239.6 626 100.0
MCO12G492 Micromonas commoda HOM05D002632 ORTHO05D002881 9.0e-18 96.3 219 35.6
CiPaw.02G063400 Carya illinoinensis HOM05D002632 ORTHO05D002881 3.5e-14 84.3 250 30.8
BcaB02g08641 Brassica carinata HOM05D002632 ORTHO05D002881 4.6e-14 84.0 249 30.9
A04p08130 Brassica napus HOM05D002632 ORTHO05D002881 4.6e-14 84.0 249 31.3
C04p41810 Brassica napus HOM05D002632 ORTHO05D002881 4.6e-14 84.0 249 31.3
BraA04t16502Z Brassica rapa HOM05D002632 ORTHO05D002881 4.6e-14 84.0 249 31.3
Cre08.g378250 Chlamydomonas reinhardtii HOM05D002632 ORTHO05D002881 4.6e-14 84.0 250 32.8
BcaC02g09371 Brassica carinata HOM05D002632 ORTHO05D002881 6.0e-14 83.6 249 31.3
BolC4t25762H Brassica oleracea HOM05D002632 ORTHO05D002881 6.0e-14 83.6 249 31.3
Thhalv10025872m.g Eutrema salsugineum HOM05D002632 ORTHO05D002881 6.0e-14 83.6 249 30.9
AT4G14000 Arabidopsis thaliana HOM05D002632 ORTHO05D002881 1.1e-12 79.3 250 29.6
Manes.05G201800 Manihot esculenta HOM05D002632 ORTHO05D002881 1.1e-12 79.3 258 28.3
Sp7g11800 Schrenkiella parvula HOM05D002632 ORTHO05D002881 1.1e-12 79.3 249 29.7
Haze_11663 Corylus avellana HOM05D002632 ORTHO05D002881 1.9e-12 78.6 250 30.4
AL7G42440 Arabidopsis lyrata HOM05D002632 ORTHO05D002881 2.5e-12 78.2 241 30.3
ClCG05G007030 Citrullus lanatus HOM05D002632 ORTHO05D002881 4.3e-12 77.4 233 30.0
Potri.001G321100 Populus trichocarpa HOM05D002632 ORTHO05D002881 4.3e-12 77.4 250 30.8
QL06p026917 Quercus lobata HOM05D002632 ORTHO05D002881 7.4e-12 76.6 250 28.4
Carub.0007s2843 Capsella rubella HOM05D002632 ORTHO05D002881 9.6e-12 76.3 250 29.2
Sabra16G0203600 Salix brachista HOM05D002632 ORTHO05D002881 1.3e-11 75.9 250 29.6
SMO275G0063 Selaginella moellendorffii HOM05D002632 ORTHO05D002881 2.1e-11 75.1 243 28.8
Aqoxy2G02390 Aquilegia oxysepala HOM05D002632 ORTHO05D002881 2.8e-11 74.7 256 29.3
Eucgr.H00019 Eucalyptus grandis HOM05D002632 ORTHO05D002881 3.7e-11 74.3 236 30.5
Glyma.18G002700 Glycine max HOM05D002632 ORTHO05D002881 3.7e-11 74.3 243 30.5
Sed0003247 Sechium edule HOM05D002632 ORTHO05D002881 4.8e-11 73.9 245 27.8
CAN.G767.18 Capsicum annuum HOM05D002632 ORTHO05D002881 6.2e-11 73.6 242 29.3
Ciclev10005461m.g Citrus clementina HOM05D002632 ORTHO05D002881 6.2e-11 73.6 288 26.4
MBI18_g03882_MAGBIO Magnolia biondii HOM05D002632 ORTHO05D002881 6.2e-11 73.6 235 28.9
Sc13g0000450 Simmondsia chinensis HOM05D002632 ORTHO05D002881 6.2e-11 73.6 250 29.6
CARHR219970 Cardamine hirsuta HOM05D002632 ORTHO05D002881 8.1e-11 73.2 243 28.0
CsaV3_3G015730 Cucumis sativus L. HOM05D002632 ORTHO05D002881 8.1e-11 73.2 234 29.1
Os09g0359900 Oryza sativa ssp. japonica HOM05D002632 ORTHO05D002881 8.1e-11 73.2 255 28.6
HPP92_022938 Vanilla planifolia HOM05D002632 ORTHO05D002881 1.1e-10 72.8 227 30.4
HPP92_022948 Vanilla planifolia HOM05D002632 ORTHO05D002881 1.1e-10 72.8 227 30.4
Aa31LG8G10370 Aethionema arabicum HOM05D002632 ORTHO05D002881 1.4e-10 72.4 252 28.6
SMO367G1084 Selaginella moellendorffii HOM05D002632 ORTHO05D002881 1.4e-10 72.4 268 28.7
Duzib268G1539 Durio zibethinus HOM05D002632 ORTHO05D002881 4.0e-10 70.9 242 31.8
CDE04G1900 Ceratophyllum demersum HOM05D002632 ORTHO05D002881 5.3e-10 70.5 223 28.7
Gorai.011G152100 Gossypium raimondii HOM05D002632 ORTHO05D002881 5.3e-10 70.5 242 30.2
HanXRQChr15g0485811 Helianthus annuus HOM05D002632 ORTHO05D002881 5.3e-10 70.5 243 28.0
MD04G1018000 Malus domestica HOM05D002632 ORTHO05D002881 5.3e-10 70.5 247 29.1
PGR142G2893 Punica granatum HOM05D002632 ORTHO05D002881 5.3e-10 70.5 235 29.4
Rhsim04G0026300 Rhododendron simsii HOM05D002632 ORTHO05D002881 5.3e-10 70.5 221 30.3
CiPaw.02G064000 Carya illinoinensis HOM05D002632 ORTHO05D002881 6.9e-10 70.1 251 28.7
MELO3C006772.2 Cucumis melo HOM05D002632 ORTHO05D002881 6.9e-10 70.1 234 29.1
Gohir.D10G137000 Gossypium hirsutum HOM05D002632 ORTHO05D002881 6.9e-10 70.1 242 30.2
THA.LOC104804794 Tarenaya hassleriana HOM05D002632 ORTHO05D002881 6.9e-10 70.1 252 27.0
unitig_744.g24026 Utricularia gibba HOM05D002632 ORTHO05D002881 6.9e-10 70.1 244 29.5
Lalb_Chr08g0230491 Lupinus albus HOM05D002632 ORTHO05D002881 9.0e-10 69.7 327 25.7
RcHm_v2.0_Chr4g0413351 Rosa chinensis HOM05D002632 ORTHO05D002881 9.0e-10 69.7 249 26.5
CSS0040167 Camellia sinensis var. sinensis HOM05D002632 ORTHO05D002881 1.2e-09 69.3 309 25.9
AUR62020873 Chenopodium quinoa HOM05D002632 ORTHO05D002881 1.2e-09 69.3 231 27.3
MSTRG.24611 Avicennia marina HOM05D002632 ORTHO05D002881 1.5e-09 68.9 252 28.6
EL10Ac3g07443 Beta vulgaris HOM05D002632 ORTHO05D002881 1.5e-09 68.9 245 27.8
Ca_04111_v3 Cicer arietinum L. HOM05D002632 ORTHO05D002881 1.5e-09 68.9 239 28.0
TAR365G0766 Trochodendron aralioides HOM05D002632 ORTHO05D002881 1.5e-09 68.9 245 27.8
AagrBONN_evm.TU.Sc2ySwM_228.111 Anthoceros agrestis HOM05D002632 ORTHO05D002881 2.0e-09 68.6 299 28.1
CSS0027222 Camellia sinensis var. sinensis HOM05D002632 ORTHO05D002881 2.0e-09 68.6 309 25.9
COL.COLO4_05440 Corchorus olitorius HOM05D002632 ORTHO05D002881 2.0e-09 68.6 257 26.8
FvH4_4g13200 Fragaria vesca HOM05D002632 ORTHO05D002881 2.0e-09 68.6 249 26.1
FAN12G3214 Fragaria x ananassa HOM05D002632 ORTHO05D002881 2.0e-09 68.6 253 25.3
PRCOL_00002247 Prasinoderma coloniale HOM05D002632 ORTHO05D002881 2.0e-09 68.6 223 31.8
Zm00001eb098490 Zea mays HOM05D002632 ORTHO05D002881 2.0e-09 68.6 248 29.0
CSS0027550 Camellia sinensis var. sinensis HOM05D002632 ORTHO05D002881 2.6e-09 68.2 312 25.6
ECA238G4635 Erigeron canadensis HOM05D002632 ORTHO05D002881 2.6e-09 68.2 237 29.1
Migut.N00425 Erythranthe guttata HOM05D002632 ORTHO05D002881 2.6e-09 68.2 244 29.5
Gohir.A10G129200 Gossypium hirsutum HOM05D002632 ORTHO05D002881 2.6e-09 68.2 242 29.8
Thecc.04G193800 Theobroma cacao HOM05D002632 ORTHO05D002881 2.6e-09 68.2 243 30.9
Atru.chr4.1554 Acer truncatum HOM05D002632 ORTHO05D002881 4.5e-09 67.4 251 26.3
Lju912C2G13 Lonicera japonica HOM05D002632 ORTHO05D002881 4.5e-09 67.4 249 26.9
Lj6g0021538 Lotus japonicus HOM05D002632 ORTHO05D002881 4.5e-09 67.4 246 28.9
PSO210G3035 Papaver somniferum HOM05D002632 ORTHO05D002881 4.5e-09 67.4 258 30.6
SalBow3G2534 Salvia bowleyana HOM05D002632 ORTHO05D002881 4.5e-09 67.4 249 28.5
Nn7g37634 Nelumbo nucifera HOM05D002632 ORTHO05D002881 5.8e-09 67.0 235 29.4
Phvul.001G266000 Phaseolus vulgaris HOM05D002632 ORTHO05D002881 5.8e-09 67.0 235 28.9
Prupe.1G166800 Prunus persica HOM05D002632 ORTHO05D002881 7.6e-09 66.6 249 27.7
VMungo1383G3241 Vigna mungo HOM05D002632 ORTHO05D002881 9.9e-09 66.2 237 29.5
CANSAT78G1535 Cannabis sativa HOM05D002632 ORTHO05D002881 1.3e-08 65.9 256 26.6
Hma1.2p1_0349F.1_g132020 Hydrangea macrophylla HOM05D002632 ORTHO05D002881 1.3e-08 65.9 250 29.6
PGSC0003DMG400004663 Solanum tuberosum HOM05D002632 ORTHO05D002881 1.3e-08 65.9 247 28.7
PSO761G0190 Papaver somniferum HOM05D002632 ORTHO05D002881 1.7e-08 65.5 235 30.2
Medtr7g008030 Medicago truncatula HOM05D002632 ORTHO05D002881 2.2e-08 65.1 246 28.9
AUR62018546 Chenopodium quinoa HOM05D002632 ORTHO05D002881 2.9e-08 64.7 233 26.6
FAN07G0477 Fragaria x ananassa HOM05D002632 ORTHO05D002881 2.9e-08 64.7 249 25.7
Psat3g194800 Pisum sativum HOM05D002632 ORTHO05D002881 2.9e-08 64.7 235 28.1
Dinv27193 Davidia involucrata HOM05D002632 ORTHO05D002881 3.8e-08 64.3 253 26.5
FAN17G2987 Fragaria x ananassa HOM05D002632 ORTHO05D002881 3.8e-08 64.3 243 26.3
ATR0693G355 Amborella trichopoda HOM05D002632 ORTHO05D002881 4.9e-08 63.9 239 28.0
Sopen12g033310 Solanum pennellii HOM05D002632 ORTHO05D002881 6.4e-08 63.5 245 27.8
SGA_v2.0_scaffold4G02140 Striga asiatica HOM05D002632 ORTHO05D002881 6.4e-08 63.5 240 27.9
SMO361G0483 Selaginella moellendorffii HOM05D002632 ORTHO05D002881 8.4e-08 63.2 247 27.9
Solyc12g098530.2 Solanum lycopersicum HOM05D002632 ORTHO05D002881 8.4e-08 63.2 245 28.2
Nitab4.5_0001574g0120 Nicotiana tabacum HOM05D002632 ORTHO05D002881 1.1e-07 62.8 234 27.8
Peaxi162Scf00652g00017 Petunia axillaris HOM05D002632 ORTHO05D002881 1.1e-07 62.8 234 27.8
Ah.13g077900 Amaranthus hybridus HOM05D002632 ORTHO05D002881 1.4e-07 62.4 241 26.6
Mapoly0002s0255 Marchantia polymorpha HOM05D002632 ORTHO05D002881 1.4e-07 62.4 284 28.2
DCAR_005286 Daucus carota HOM05D002632 ORTHO05D002881 2.4e-07 61.6 234 25.2
Nitab4.5_0003263g0020 Nicotiana tabacum HOM05D002632 ORTHO05D002881 2.4e-07 61.6 238 28.2
Cpa.g.sc157.41 Carica papaya HOM05D002632 ORTHO05D002881 3.2e-07 61.2 191 29.8
TPR.G4308 Trifolium pratense HOM05D002632 ORTHO05D002881 5.5e-07 60.5 243 25.9
Hund24429 Selenicereus undatus HOM05D002632 ORTHO05D002881 7.1e-07 60.1 236 26.7
Cc00_g21630 Coffea canephora HOM05D002632 ORTHO05D002881 1.2e-06 59.3 244 27.5
CSS0041499 Camellia sinensis var. sinensis HOM05D002632 ORTHO05D002881 1.6e-06 58.9 232 26.7
Pp3c20_16690 Physcomitrium patens HOM05D002632 ORTHO05D002881 3.5e-06 57.8 281 27.8


User provided reference genes

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