Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa023097 Carpinus fangiana HOM05D003906 ORTHO05D004776 2.7e-247 858.2 430 100.0
Mapoly0002s0237 Marchantia polymorpha HOM05D003906 ORTHO05D004776 3.9e-12 77.0 172 32.6
HPP92_001193 Vanilla planifolia HOM05D003906 ORTHO05D004776 3.3e-11 73.9 172 33.7
ATR1136G046 Amborella trichopoda HOM05D003906 ORTHO05D004776 4.3e-11 73.6 211 29.4
Pp3c16_23970 Physcomitrium patens HOM05D003906 ORTHO05D004776 9.5e-11 72.4 172 29.1
Cre09.g387801 Chlamydomonas reinhardtii HOM05D003906 ORTHO05D004776 2.8e-10 70.9 161 30.4
Glyma.12G000900 Glycine max HOM05D003906 ORTHO05D004776 1.1e-09 68.9 145 31.0
PRCOL_00002342 Prasinoderma coloniale HOM05D003906 ORTHO05D004776 2.3e-09 67.8 118 33.9
SMO236G0134 Selaginella moellendorffii HOM05D003906 ORTHO05D004776 4.0e-09 67.0 173 28.9
Pp3c25_15350 Physcomitrium patens HOM05D003906 ORTHO05D004776 5.2e-09 66.6 174 31.0
Nn5g27566 Nelumbo nucifera HOM05D003906 ORTHO05D004776 6.8e-09 66.2 114 34.2
Zm00001eb182000 Zea mays HOM05D003906 ORTHO05D004776 8.9e-09 65.9 171 28.7
Solyc03g033380.3 Solanum lycopersicum HOM05D003906 ORTHO05D004776 1.5e-08 65.1 113 34.5
Sopen03g006150 Solanum pennellii HOM05D003906 ORTHO05D004776 1.5e-08 65.1 113 34.5
Ah.05g178390 Amaranthus hybridus HOM05D003906 ORTHO05D004776 2.0e-08 64.7 113 33.6
CAN.G354.51 Capsicum annuum HOM05D003906 ORTHO05D004776 2.0e-08 64.7 113 34.5
AUR62004621 Chenopodium quinoa HOM05D003906 ORTHO05D004776 2.0e-08 64.7 113 35.4
AUR62023516 Chenopodium quinoa HOM05D003906 ORTHO05D004776 2.0e-08 64.7 113 35.4
Nitab4.5_0000130g0080 Nicotiana tabacum HOM05D003906 ORTHO05D004776 2.6e-08 64.3 113 33.6
Peaxi162Scf00076g00225 Petunia axillaris HOM05D003906 ORTHO05D004776 2.6e-08 64.3 113 33.6
MBI06_g32171_MAGBIO Magnolia biondii HOM05D003906 ORTHO05D004776 3.4e-08 63.9 114 33.3
Manes.02G196200 Manihot esculenta HOM05D003906 ORTHO05D004776 4.4e-08 63.5 168 28.0
Hund16785 Selenicereus undatus HOM05D003906 ORTHO05D004776 4.4e-08 63.5 113 34.5
TWI59G1118 Tripterygium wilfordii HOM05D003906 ORTHO05D004776 4.4e-08 63.5 113 33.6
Nitab4.5_0009321g0030 Nicotiana tabacum HOM05D003906 ORTHO05D004776 5.8e-08 63.2 113 32.7
Phvul.011G000900 Phaseolus vulgaris HOM05D003906 ORTHO05D004776 5.8e-08 63.2 145 30.3
Actinidia23018 Actinidia chinensis HOM05D003906 ORTHO05D004776 7.6e-08 62.8 113 33.6
Aa31LG6G8750 Aethionema arabicum HOM05D003906 ORTHO05D004776 7.6e-08 62.8 134 30.6
Os02g0556600 Oryza sativa ssp. japonica HOM05D003906 ORTHO05D004776 7.6e-08 62.8 119 32.8
CDE08G1205 Ceratophyllum demersum HOM05D003906 ORTHO05D004776 9.9e-08 62.4 114 34.2
Cc10_g10260 Coffea canephora HOM05D003906 ORTHO05D004776 9.9e-08 62.4 114 35.1
PSO170G2127 Papaver somniferum HOM05D003906 ORTHO05D004776 9.9e-08 62.4 114 33.3
C03p34490 Brassica napus HOM05D003906 ORTHO05D004776 1.3e-07 62.0 81 39.5
BraA03t12055Z Brassica rapa HOM05D003906 ORTHO05D004776 1.3e-07 62.0 81 39.5
CDE02G3748 Ceratophyllum demersum HOM05D003906 ORTHO05D004776 1.3e-07 62.0 114 34.2
Zm00001eb243840 Zea mays HOM05D003906 ORTHO05D004776 1.3e-07 62.0 113 32.7
Aqoxy5G02955 Aquilegia oxysepala HOM05D003906 ORTHO05D004776 1.7e-07 61.6 114 33.3
BcaB01g02792 Brassica carinata HOM05D003906 ORTHO05D004776 1.7e-07 61.6 81 38.3
CSS0022245 Camellia sinensis var. sinensis HOM05D003906 ORTHO05D004776 1.7e-07 61.6 114 33.3
CSS0049725 Camellia sinensis var. sinensis HOM05D003906 ORTHO05D004776 1.7e-07 61.6 114 33.3
Dinv41741 Davidia involucrata HOM05D003906 ORTHO05D004776 1.7e-07 61.6 113 32.7
Sabra13G0093600 Salix brachista HOM05D003906 ORTHO05D004776 1.7e-07 61.6 113 33.6
EL10Ac1g00112 Beta vulgaris HOM05D003906 ORTHO05D004776 2.2e-07 61.2 113 33.6
Thhalv10001818m.g Eutrema salsugineum HOM05D003906 ORTHO05D004776 2.2e-07 61.2 158 28.5
HanXRQChr04g0109631 Helianthus annuus HOM05D003906 ORTHO05D004776 2.2e-07 61.2 114 33.3
Lj4C483G1 Lonicera japonica HOM05D003906 ORTHO05D004776 2.2e-07 61.2 113 32.7
Lj3g0000257 Lotus japonicus HOM05D003906 ORTHO05D004776 2.2e-07 61.2 145 31.0
Atru.chr2.1825 Acer truncatum HOM05D003906 ORTHO05D004776 2.9e-07 60.8 113 32.7
A03p28530 Brassica napus HOM05D003906 ORTHO05D004776 3.7e-07 60.5 81 38.3
Ciclev10001078m.g Citrus clementina HOM05D003906 ORTHO05D004776 3.7e-07 60.5 113 32.7
Dinv04083 Davidia involucrata HOM05D003906 ORTHO05D004776 3.7e-07 60.5 113 34.5
ECA247G1339 Erigeron canadensis HOM05D003906 ORTHO05D004776 3.7e-07 60.5 113 33.6
Glyma.08G238500 Glycine max HOM05D003906 ORTHO05D004776 3.7e-07 60.5 114 33.3
Rhsim06G0114100 Rhododendron simsii HOM05D003906 ORTHO05D004776 3.7e-07 60.5 114 34.2
Thecc.08G187700 Theobroma cacao HOM05D003906 ORTHO05D004776 3.7e-07 60.5 114 34.2
MELO3C022219.2 Cucumis melo HOM05D003906 ORTHO05D004776 4.9e-07 60.1 114 33.3
CsaV3_5G040450 Cucumis sativus L. HOM05D003906 ORTHO05D004776 4.9e-07 60.1 114 33.3
PSO017G0948 Papaver somniferum HOM05D003906 ORTHO05D004776 4.9e-07 60.1 114 32.5
GSVIVG01001786001 Vitis vinifera HOM05D003906 ORTHO05D004776 4.9e-07 60.1 113 31.9
CSS0005180 Camellia sinensis var. sinensis HOM05D003906 ORTHO05D004776 6.4e-07 59.7 114 32.5
CARHR034240 Cardamine hirsuta HOM05D003906 ORTHO05D004776 6.4e-07 59.7 104 33.7
CiPaw.08G001800 Carya illinoinensis HOM05D003906 ORTHO05D004776 6.4e-07 59.7 114 31.6
Potri.013G108400 Populus trichocarpa HOM05D003906 ORTHO05D004776 6.4e-07 59.7 113 32.7
THA.LOC104816477 Tarenaya hassleriana HOM05D003906 ORTHO05D004776 6.4e-07 59.7 113 33.6
Hma1.2p1_0342F.1_g130710 Hydrangea macrophylla HOM05D003906 ORTHO05D004776 8.4e-07 59.3 114 32.5
BcaC01g04722 Brassica carinata HOM05D003906 ORTHO05D004776 1.1e-06 58.9 81 37.0
BolC3t15761H Brassica oleracea HOM05D003906 ORTHO05D004776 1.1e-06 58.9 81 37.0
COL.COLO4_24795 Corchorus olitorius HOM05D003906 ORTHO05D004776 1.1e-06 58.9 114 34.2
Gohir.A05G251300 Gossypium hirsutum HOM05D003906 ORTHO05D004776 1.1e-06 58.9 113 33.6
Gohir.D05G252500 Gossypium hirsutum HOM05D003906 ORTHO05D004776 1.1e-06 58.9 113 33.6
Gorai.009G264700 Gossypium raimondii HOM05D003906 ORTHO05D004776 1.1e-06 58.9 113 33.6
Prupe.1G552200 Prunus persica HOM05D003906 ORTHO05D004776 1.1e-06 58.9 113 31.9
AagrBONN_evm.TU.Sc2ySwM_369.175 Anthoceros agrestis HOM05D003906 ORTHO05D004776 1.4e-06 58.5 157 28.7
AL6G42970 Arabidopsis lyrata HOM05D003906 ORTHO05D004776 1.4e-06 58.5 81 37.0
Carub.0006s2784 Capsella rubella HOM05D003906 ORTHO05D004776 1.4e-06 58.5 81 37.0
Haze_21286 Corylus avellana HOM05D003906 ORTHO05D004776 1.4e-06 58.5 113 31.0
Migut.C01295 Erythranthe guttata HOM05D003906 ORTHO05D004776 1.4e-06 58.5 115 33.9
MD08G1220100 Malus domestica HOM05D003906 ORTHO05D004776 1.4e-06 58.5 113 31.9
MD15G1410300 Malus domestica HOM05D003906 ORTHO05D004776 1.4e-06 58.5 113 31.9
TAR628G0992 Trochodendron aralioides HOM05D003906 ORTHO05D004776 1.4e-06 58.5 113 32.7
VMungo1127G1719 Vigna mungo HOM05D003906 ORTHO05D004776 1.4e-06 58.5 114 31.6
Manes.18G104100 Manihot esculenta HOM05D003906 ORTHO05D004776 1.9e-06 58.2 145 29.7
unitig_749.g13881 Utricularia gibba HOM05D003906 ORTHO05D004776 1.9e-06 58.2 114 33.3
BcaB03g13663 Brassica carinata HOM05D003906 ORTHO05D004776 2.4e-06 57.8 135 30.4
Lsat_1_v5_gn_1_12460 Lactuca sativa HOM05D003906 ORTHO05D004776 2.4e-06 57.8 114 31.6
BolC5t32471H Brassica oleracea HOM05D003906 ORTHO05D004776 3.2e-06 57.4 103 33.0
Cfa012932 Carpinus fangiana HOM05D003906 ORTHO05D000991 3.2e-06 57.4 113 31.0
Gohir.A09G115500 Gossypium hirsutum HOM05D003906 ORTHO05D004776 3.2e-06 57.4 113 32.7
PGR042G0234 Punica granatum HOM05D003906 ORTHO05D004776 3.2e-06 57.4 113 31.9
Sed0011736 Sechium edule HOM05D003906 ORTHO05D004776 3.2e-06 57.4 113 31.0
Lalb_Chr01g0000071 Lupinus albus HOM05D003906 ORTHO05D004776 4.1e-06 57.0 151 28.5
SalBow7G1596 Salvia bowleyana HOM05D003906 ORTHO05D004776 4.1e-06 57.0 103 32.0
SEGI_19081 Sequoiadendron giganteum HOM05D003906 ORTHO05D004776 4.1e-06 57.0 81 35.8
Psat7g226120 Pisum sativum HOM05D003906 ORTHO05D004776 7.1e-06 56.2 104 31.7
QL02p025746 Quercus lobata HOM05D003906 ORTHO05D004776 7.1e-06 56.2 113 31.0
arahy.Tifrunner.gnm1.ann1.AC170Q Arachis hypogaea HOM05D003906 ORTHO05D004776 9.2e-06 55.8 104 31.7
arahy.Tifrunner.gnm1.ann1.NDRV14 Arachis hypogaea HOM05D003906 ORTHO05D004776 9.2e-06 55.8 104 31.7
Duzib177G0129 Durio zibethinus HOM05D003906 ORTHO05D004776 9.2e-06 55.8 113 31.9
Eucgr.F02579 Eucalyptus grandis HOM05D003906 ORTHO05D004776 9.2e-06 55.8 81 35.8
Sp6g08200 Schrenkiella parvula HOM05D003906 ORTHO05D004776 9.2e-06 55.8 81 35.8


User provided reference genes

Program Settings