Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa023089 Carpinus fangiana HOM05D004531 ORTHO05D005484 3.9e-152 541.6 306 100.0
PRCOL_00003072 Prasinoderma coloniale HOM05D004531 ORTHO05D005484 1.2e-18 98.2 251 33.5
Lj6g0006960 Lotus japonicus HOM05D004531 ORTHO05D005484 1.4e-16 91.3 132 44.7
Cre13.g573050 Chlamydomonas reinhardtii HOM05D004531 ORTHO05D005484 1.8e-16 90.9 243 34.6
Gohir.D10G227700 Gossypium hirsutum HOM05D004531 ORTHO05D005484 2.4e-16 90.5 132 43.9
CBR_g26482 Chara braunii HOM05D004531 ORTHO05D005484 4.1e-16 89.7 171 39.8
Nn5g28465 Nelumbo nucifera HOM05D004531 ORTHO05D005484 7.0e-16 89.0 246 30.9
EL10Ac9g22646 Beta vulgaris HOM05D004531 ORTHO05D005484 9.1e-16 88.6 125 43.2
Gohir.A06G180300 Gossypium hirsutum HOM05D004531 ORTHO05D005484 9.1e-16 88.6 132 43.2
Gorai.011G260100 Gossypium raimondii HOM05D004531 ORTHO05D005484 9.1e-16 88.6 137 42.3
Potri.016G024300 Populus trichocarpa HOM05D004531 ORTHO05D005484 9.1e-16 88.6 182 35.2
COL.COLO4_07074 Corchorus olitorius HOM05D004531 ORTHO05D005484 1.2e-15 88.2 168 39.9
Ciclev10012657m.g Citrus clementina HOM05D004531 ORTHO05D005484 1.6e-15 87.8 137 41.6
Duzib248G1029 Durio zibethinus HOM05D004531 ORTHO05D005484 1.6e-15 87.8 132 43.2
Nitab4.5_0010736g0010 Nicotiana tabacum HOM05D004531 ORTHO05D005484 1.6e-15 87.8 132 42.4
Sabra16G0021800 Salix brachista HOM05D004531 ORTHO05D005484 1.6e-15 87.8 182 34.6
Nitab4.5_0000082g0350 Nicotiana tabacum HOM05D004531 ORTHO05D005484 2.0e-15 87.4 132 42.4
AUR62034356 Chenopodium quinoa HOM05D004531 ORTHO05D005484 2.7e-15 87.0 130 43.1
Hund15691 Selenicereus undatus HOM05D004531 ORTHO05D005484 2.7e-15 87.0 122 45.9
Thecc.05G127100 Theobroma cacao HOM05D004531 ORTHO05D005484 2.7e-15 87.0 132 41.7
Medtr4g094380 Medicago truncatula HOM05D004531 ORTHO05D005484 3.5e-15 86.7 131 42.7
EL10Ac1g01672 Beta vulgaris HOM05D004531 ORTHO05D005484 4.5e-15 86.3 125 42.4
Manes.11G057800 Manihot esculenta HOM05D004531 ORTHO05D005484 4.5e-15 86.3 125 44.8
VMungo0251G1523 Vigna mungo HOM05D004531 ORTHO05D005484 4.5e-15 86.3 132 40.9
Ca_18320_v3 Cicer arietinum L. HOM05D004531 ORTHO05D005484 5.9e-15 85.9 132 41.7
Eucgr.A02172 Eucalyptus grandis HOM05D004531 ORTHO05D005484 5.9e-15 85.9 132 40.9
Phvul.002G203400 Phaseolus vulgaris HOM05D004531 ORTHO05D005484 7.7e-15 85.5 132 40.9
Ciclev10010418m.g Citrus clementina HOM05D004531 ORTHO05D005484 1.0e-14 85.1 123 43.9
Prupe.8G106900 Prunus persica HOM05D004531 ORTHO05D005484 1.0e-14 85.1 137 40.1
MSTRG.6389 Avicennia marina HOM05D004531 ORTHO05D005484 1.3e-14 84.7 125 42.4
CAN.G641.37 Capsicum annuum HOM05D004531 ORTHO05D005484 1.3e-14 84.7 132 40.9
AUR62022353 Chenopodium quinoa HOM05D004531 ORTHO05D005484 1.3e-14 84.7 130 42.3
Glyma.05G122300 Glycine max HOM05D004531 ORTHO05D005484 1.3e-14 84.7 131 41.2
Glyma.08G077300 Glycine max HOM05D004531 ORTHO05D005484 1.3e-14 84.7 132 40.9
Duzib052G0496 Durio zibethinus HOM05D004531 ORTHO05D005484 1.7e-14 84.3 132 41.7
Psat7g095600 Pisum sativum HOM05D004531 ORTHO05D005484 1.7e-14 84.3 125 44.0
arahy.Tifrunner.gnm1.ann1.35U2WI Arachis hypogaea HOM05D004531 ORTHO05D005484 2.9e-14 83.6 125 42.4
arahy.Tifrunner.gnm1.ann1.8UG22X Arachis hypogaea HOM05D004531 ORTHO05D005484 2.9e-14 83.6 125 42.4
arahy.Tifrunner.gnm1.ann1.JM9XLQ Arachis hypogaea HOM05D004531 ORTHO05D005484 2.9e-14 83.6 125 42.4
CDE07G2032 Ceratophyllum demersum HOM05D004531 ORTHO05D005484 3.8e-14 83.2 125 43.2
Cc06_g18540 Coffea canephora HOM05D004531 ORTHO05D005484 3.8e-14 83.2 125 42.4
Sed0018245 Sechium edule HOM05D004531 ORTHO05D005484 3.8e-14 83.2 125 44.0
Nitab4.5_0000646g0260 Nicotiana tabacum HOM05D004531 ORTHO05D005484 5.0e-14 82.8 125 42.4
Pp3c3_27620 Physcomitrium patens HOM05D004531 ORTHO05D005484 5.0e-14 82.8 158 39.9
Pp3s222_10 Physcomitrium patens HOM05D004531 ORTHO05D005484 5.0e-14 82.8 158 39.9
QL09p051267 Quercus lobata HOM05D004531 ORTHO05D005484 5.0e-14 82.8 137 42.3
SalBow6G4182 Salvia bowleyana HOM05D004531 ORTHO05D005484 5.0e-14 82.8 132 40.2
CSS0023033 Camellia sinensis var. sinensis HOM05D004531 ORTHO05D005484 6.6e-14 82.4 160 39.4
Lalb_Chr13g0291551 Lupinus albus HOM05D004531 ORTHO05D005484 6.6e-14 82.4 132 40.2
Prupe.4G200900 Prunus persica HOM05D004531 ORTHO05D005484 6.6e-14 82.4 137 39.4
RhsimUnG0021500 Rhododendron simsii HOM05D004531 ORTHO05D005484 6.6e-14 82.4 131 42.0
Sc15g0002670 Simmondsia chinensis HOM05D004531 ORTHO05D005484 6.6e-14 82.4 137 39.4
Sabra16G0030200 Salix brachista HOM05D004531 ORTHO05D005484 8.6e-14 82.0 247 29.6
Hund22289 Selenicereus undatus HOM05D004531 ORTHO05D005484 8.6e-14 82.0 108 45.4
TAR374G0360 Trochodendron aralioides HOM05D004531 ORTHO05D005484 8.6e-14 82.0 125 41.6
Thhalv10006222m.g Eutrema salsugineum HOM05D004531 ORTHO05D005484 1.1e-13 81.6 140 39.3
TWI77G0822 Tripterygium wilfordii HOM05D004531 ORTHO05D005484 1.1e-13 81.6 159 37.1
Hma1.2p1_0341F.1_g130530 Hydrangea macrophylla HOM05D004531 ORTHO05D005484 1.5e-13 81.3 167 36.5
Solyc10g079430.2 Solanum lycopersicum HOM05D004531 ORTHO05D005484 1.5e-13 81.3 125 40.8
vmacro07599 Vaccinium macrocarpon HOM05D004531 ORTHO05D005484 1.5e-13 81.3 182 31.9
Migut.J01686 Erythranthe guttata HOM05D004531 ORTHO05D005484 1.9e-13 80.9 125 40.8
MBI13_g30229_MAGBIO Magnolia biondii HOM05D004531 ORTHO05D005484 1.9e-13 80.9 121 44.6
Oeu020249.1 Olea europaea HOM05D004531 ORTHO05D005484 1.9e-13 80.9 121 44.6
PGR042G0151 Punica granatum HOM05D004531 ORTHO05D005484 1.9e-13 80.9 137 39.4
SGA_v2.0_scaffold69G23138 Striga asiatica HOM05D004531 ORTHO05D005484 1.9e-13 80.9 132 38.6
TPR.G23804 Trifolium pratense HOM05D004531 ORTHO05D005484 1.9e-13 80.9 134 39.6
Dinv14546 Davidia involucrata HOM05D004531 ORTHO05D005484 2.5e-13 80.5 129 38.8
HanXRQChr14g0437741 Helianthus annuus HOM05D004531 ORTHO05D005484 2.5e-13 80.5 125 41.6
ClCG11G010890 Citrullus lanatus HOM05D004531 ORTHO05D005484 3.3e-13 80.1 125 43.2
Mapoly0074s0052 Marchantia polymorpha HOM05D004531 ORTHO05D005484 3.3e-13 80.1 125 40.0
PGSC0003DMG400008162 Solanum tuberosum HOM05D004531 ORTHO05D005484 3.3e-13 80.1 142 38.7
CiPaw.08G117500 Carya illinoinensis HOM05D004531 ORTHO05D005484 4.2e-13 79.7 169 37.9
Dinv37065 Davidia involucrata HOM05D004531 ORTHO05D005484 4.2e-13 79.7 166 37.3
Lj7A661T48 Lonicera japonica HOM05D004531 ORTHO05D005484 4.2e-13 79.7 125 40.8
unitig_746.g26802 Utricularia gibba HOM05D004531 ORTHO05D005484 4.2e-13 79.7 127 43.3
GSVIVG01029836001 Vitis vinifera HOM05D004531 ORTHO05D005484 4.2e-13 79.7 248 29.8
MD11G1228500 Malus domestica HOM05D004531 ORTHO05D005484 7.2e-13 79.0 137 38.7
MCO16G699 Micromonas commoda HOM05D004531 ORTHO05D005484 7.2e-13 79.0 159 37.1
ATR1096G053 Amborella trichopoda HOM05D004531 ORTHO05D005484 9.5e-13 78.6 124 41.1
CsaV3_2G009570 Cucumis sativus L. HOM05D004531 ORTHO05D005484 9.5e-13 78.6 125 41.6
MD11G1228700 Malus domestica HOM05D004531 ORTHO05D005484 9.5e-13 78.6 137 38.7
MD15G1425000 Malus domestica HOM05D004531 ORTHO05D005484 9.5e-13 78.6 137 38.7
Os01g0810000 Oryza sativa ssp. japonica HOM05D004531 ORTHO05D005484 9.5e-13 78.6 248 30.2
SGA_v2.0_scaffold105G30334 Striga asiatica HOM05D004531 ORTHO05D005484 9.5e-13 78.6 123 40.7
CANSAT56G3883 Cannabis sativa HOM05D004531 ORTHO05D005484 1.2e-12 78.2 132 37.9
MELO3C008757.2 Cucumis melo HOM05D004531 ORTHO05D005484 1.2e-12 78.2 125 41.6
THA.LOC104820245 Tarenaya hassleriana HOM05D004531 ORTHO05D005484 1.2e-12 78.2 176 36.4
Cfa002196 Carpinus fangiana HOM05D004531 ORTHO05D005484 1.6e-12 77.8 125 41.6
Peaxi162Scf00002g10416 Petunia axillaris HOM05D004531 ORTHO05D005484 1.6e-12 77.8 125 40.8
Atru.chr2.471 Acer truncatum HOM05D004531 ORTHO05D005484 2.1e-12 77.4 123 41.5
Haze_23723 Corylus avellana HOM05D004531 ORTHO05D005484 3.6e-12 76.6 125 40.8
AagrBONN_evm.TU.Sc2ySwM_228.1021 Anthoceros agrestis HOM05D004531 ORTHO05D005484 4.7e-12 76.3 125 40.0
DCAR_020613 Daucus carota HOM05D004531 ORTHO05D005484 4.7e-12 76.3 123 39.0
BcaB02g08172 Brassica carinata HOM05D004531 ORTHO05D005484 6.1e-12 75.9 137 37.2
RcHm_v2.0_Chr5g0037141 Rosa chinensis HOM05D004531 ORTHO05D005484 8.0e-12 75.5 251 29.5
Ah.13g077510 Amaranthus hybridus HOM05D004531 ORTHO05D005484 1.4e-11 74.7 71 53.5
BcaC02g10151 Brassica carinata HOM05D004531 ORTHO05D005484 1.4e-11 74.7 137 37.2
A04p01660 Brassica napus HOM05D004531 ORTHO05D005484 1.4e-11 74.7 137 37.2
Lsat_1_v5_gn_2_52561 Lactuca sativa HOM05D004531 ORTHO05D005484 1.8e-11 74.3 125 37.6
C04p32210 Brassica napus HOM05D004531 ORTHO05D005484 2.3e-11 73.9 137 37.2
C08p35370 Brassica napus HOM05D004531 ORTHO05D005484 2.3e-11 73.9 137 36.5
Sp5g02860 Schrenkiella parvula HOM05D004531 ORTHO05D005484 2.3e-11 73.9 140 37.1
SpUn0080_0040 Schrenkiella parvula HOM05D004531 ORTHO05D005484 2.3e-11 73.9 140 37.1
BolC8t51130H Brassica oleracea HOM05D004531 ORTHO05D005484 3.0e-11 73.6 137 36.5
ClCG09G010350 Citrullus lanatus HOM05D004531 ORTHO05D005484 3.0e-11 73.6 132 39.4
BraA09t40693Z Brassica rapa HOM05D004531 ORTHO05D005484 4.0e-11 73.2 137 36.5
PSO210G4508 Papaver somniferum HOM05D004531 ORTHO05D005484 4.0e-11 73.2 250 26.4
ECA238G4589 Erigeron canadensis HOM05D004531 ORTHO05D005484 5.2e-11 72.8 130 36.9
MELO3C023654.2 Cucumis melo HOM05D004531 ORTHO05D005484 6.8e-11 72.4 124 42.7
AL5G42600 Arabidopsis lyrata HOM05D004531 ORTHO05D005484 8.9e-11 72.0 140 37.1
A09p52640 Brassica napus HOM05D004531 ORTHO05D005484 8.9e-11 72.0 137 36.5
BcaC07g42771 Brassica carinata HOM05D004531 ORTHO05D005484 2.0e-10 70.9 137 35.0
Carub.0005s2711 Capsella rubella HOM05D004531 ORTHO05D005484 2.0e-10 70.9 140 36.4
SMO367G0994 Selaginella moellendorffii HOM05D004531 ORTHO05D005484 2.6e-10 70.5 125 37.6
AT3G60360 Arabidopsis thaliana HOM05D004531 ORTHO05D005484 3.4e-10 70.1 137 35.8
PSO210G2223 Papaver somniferum HOM05D004531 ORTHO05D005484 3.4e-10 70.1 248 25.8
Potri.006G026002 Populus trichocarpa HOM05D004531 ORTHO05D005484 4.4e-10 69.7 98 46.9
CARHR170680 Cardamine hirsuta HOM05D004531 ORTHO05D005484 7.5e-10 68.9 140 36.4
Aqoxy2G03324 Aquilegia oxysepala HOM05D004531 ORTHO05D005484 9.8e-10 68.6 132 35.6
Ca_08745_v3 Cicer arietinum L. HOM05D004531 ORTHO05D005484 9.8e-10 68.6 61 60.7
RhsimUnG0117400 Rhododendron simsii HOM05D004531 ORTHO05D005484 1.3e-09 68.2 112 40.2
Aa31LG3G11700 Aethionema arabicum HOM05D004531 ORTHO05D005484 1.7e-09 67.8 248 27.4
FvH4_3g21660 Fragaria vesca HOM05D004531 ORTHO05D005484 2.9e-09 67.0 252 29.8
HPP92_027481 Vanilla planifolia HOM05D004531 ORTHO05D005484 2.9e-09 67.0 217 31.3
Psat3g051800 Pisum sativum HOM05D004531 ORTHO05D005484 1.1e-08 65.1 79 48.1
TAR636G0629 Trochodendron aralioides HOM05D004531 ORTHO05D005484 1.4e-08 64.7 147 34.7
THA.LOC104802556 Tarenaya hassleriana HOM05D004531 ORTHO05D005484 1.8e-08 64.3 61 54.1
Gohir.A08G129500 Gossypium hirsutum HOM05D004531 ORTHO05D005484 7.0e-08 62.4 132 35.6
Zm00001eb369240 Zea mays HOM05D004531 ORTHO05D005484 7.0e-08 62.4 227 27.3
FAN11G1137 Fragaria x ananassa HOM05D004531 ORTHO05D005484 9.2e-08 62.0 154 35.1
Haze_26248 Corylus avellana HOM05D004531 ORTHO05D005484 2.0e-07 60.8 72 47.2
CsaV3_7G024290 Cucumis sativus L. HOM05D004531 ORTHO05D005484 5.9e-07 59.3 153 35.3
Carub.0007s2695 Capsella rubella HOM05D004531 ORTHO05D005484 7.8e-07 58.9 71 46.5
Cpa.g.sc115.24 Carica papaya HOM05D004531 ORTHO05D005484 5.0e-06 56.2 228 25.4


User provided reference genes

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