Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa023059 Carpinus fangiana HOM05D000170 ORTHO05D043577 1.9e-37 158.7 82 100.0
Cfa002875 Carpinus fangiana HOM05D000170 ORTHO05D000159 1.2e-23 112.8 75 84.0
Haze_17683 Corylus avellana HOM05D000170 ORTHO05D000159 1.8e-22 109.0 76 81.6
Cfa002876 Carpinus fangiana HOM05D000170 ORTHO05D000159 3.0e-22 108.2 75 81.3
Cfa001272 Carpinus fangiana HOM05D000170 ORTHO05D000159 5.1e-22 107.5 76 82.9
Cfa001277 Carpinus fangiana HOM05D000170 ORTHO05D000159 3.3e-21 104.8 77 83.1
Haze_17679 Corylus avellana HOM05D000170 ORTHO05D043577 1.6e-15 85.9 68 73.5
Haze_17924 Corylus avellana HOM05D000170 ORTHO05D000159 2.3e-14 82.0 71 67.6
Cfa018189 Carpinus fangiana HOM05D000170 ORTHO05D000159 8.7e-14 80.1 57 75.4
Haze_17922 Corylus avellana HOM05D000170 ORTHO05D000159 8.7e-14 80.1 64 67.2
Haze_17925 Corylus avellana HOM05D000170 ORTHO05D000159 1.5e-13 79.3 66 68.2
QL10p048975 Quercus lobata HOM05D000170 ORTHO05D000159 2.5e-13 78.6 79 62.0
QL10p049756 Quercus lobata HOM05D000170 ORTHO05D000159 2.5e-13 78.6 79 62.0
QL10p049880 Quercus lobata HOM05D000170 ORTHO05D000159 2.5e-13 78.6 79 62.0
Cfa021180 Carpinus fangiana HOM05D000170 ORTHO05D000159 3.3e-13 78.2 57 73.7
Cfa021173 Carpinus fangiana HOM05D000170 ORTHO05D000159 7.4e-13 77.0 57 71.9
Cfa018192 Carpinus fangiana HOM05D000170 ORTHO05D000159 2.1e-12 75.5 57 71.9
Cfa018191 Carpinus fangiana HOM05D000170 ORTHO05D000159 1.1e-11 73.2 57 71.9
Cfa019865 Carpinus fangiana HOM05D000170 ORTHO05D000159 1.5e-10 69.3 79 55.7
QL10p049768 Quercus lobata HOM05D000170 ORTHO05D000159 4.5e-10 67.8 78 55.1
Cfa018188 Carpinus fangiana HOM05D000170 ORTHO05D000159 5.8e-10 67.4 79 53.2
Dinv08011 Davidia involucrata HOM05D000170 ORTHO05D000159 2.2e-09 65.5 70 58.6
Dinv41702 Davidia involucrata HOM05D000170 ORTHO05D000159 5.5e-08 60.8 71 54.9
GSVIVG01034498001 Vitis vinifera HOM05D000170 ORTHO05D000159 2.1e-07 58.9 63 55.6
QL02p022601 Quercus lobata HOM05D000170 ORTHO05D000159 7.9e-07 57.0 72 50.0
QL02p022650 Quercus lobata HOM05D000170 ORTHO05D000159 7.9e-07 57.0 72 50.0
A01p19070 Brassica napus HOM05D000170 ORTHO05D000159 1.0e-06 56.6 62 51.6
BraA01t01850Z Brassica rapa HOM05D000170 ORTHO05D000159 1.0e-06 56.6 62 51.6
PGR042G2445 Punica granatum HOM05D000170 ORTHO05D000159 1.0e-06 56.6 78 43.6
TAR375G0759 Trochodendron aralioides HOM05D000170 ORTHO05D000159 1.0e-06 56.6 72 48.6
BcaC09g50551 Brassica carinata HOM05D000170 ORTHO05D000159 1.3e-06 56.2 62 51.6
C01p24020 Brassica napus HOM05D000170 ORTHO05D000159 1.3e-06 56.2 62 51.6
BolC1t02358H Brassica oleracea HOM05D000170 ORTHO05D000159 1.3e-06 56.2 62 51.6
CSS0048493 Camellia sinensis var. sinensis HOM05D000170 ORTHO05D000159 2.3e-06 55.5 57 50.9
Thhalv10027501m.g Eutrema salsugineum HOM05D000170 ORTHO05D000159 2.3e-06 55.5 62 50.0
AL7G25000 Arabidopsis lyrata HOM05D000170 ORTHO05D000159 3.0e-06 55.1 62 48.4
DCAR_018996 Daucus carota HOM05D000170 ORTHO05D000159 3.0e-06 55.1 57 49.1
QL02p022702 Quercus lobata HOM05D000170 ORTHO05D000159 3.0e-06 55.1 72 48.6
TAR629G1130 Trochodendron aralioides HOM05D000170 ORTHO05D000159 3.0e-06 55.1 56 58.9
Actinidia08701 Actinidia chinensis HOM05D000170 ORTHO05D000159 3.9e-06 54.7 58 51.7
Aqoxy1G03354 Aquilegia oxysepala HOM05D000170 ORTHO05D000159 3.9e-06 54.7 61 50.8
BcaC09g50553 Brassica carinata HOM05D000170 ORTHO05D000159 3.9e-06 54.7 57 52.6
BcaNung01643 Brassica carinata HOM05D000170 ORTHO05D000159 3.9e-06 54.7 57 52.6
C01p24000 Brassica napus HOM05D000170 ORTHO05D000159 3.9e-06 54.7 57 52.6
BolC1t02355H Brassica oleracea HOM05D000170 ORTHO05D000159 3.9e-06 54.7 57 52.6
Lalb_Chr19g0129771 Lupinus albus HOM05D000170 ORTHO05D000159 3.9e-06 54.7 72 47.2
Aqoxy2G02864 Aquilegia oxysepala HOM05D000170 ORTHO05D000159 5.1e-06 54.3 72 45.8
DCAR_018993 Daucus carota HOM05D000170 ORTHO05D000159 5.1e-06 54.3 57 50.9
MBI16_g20733_MAGBIO Magnolia biondii HOM05D000170 ORTHO05D002084 5.1e-06 54.3 56 51.8
Rhsim12G0186800 Rhododendron simsii HOM05D000170 ORTHO05D000159 6.7e-06 53.9 60 51.7
arahy.Tifrunner.gnm1.ann1.DV4WFM Arachis hypogaea HOM05D000170 ORTHO05D000159 8.7e-06 53.5 52 57.7
MSTRG.26971 Avicennia marina HOM05D000170 ORTHO05D000159 8.7e-06 53.5 74 44.6
Ciclev10020814m.g Citrus clementina HOM05D000170 ORTHO05D000159 8.7e-06 53.5 72 47.2
QL02p022728 Quercus lobata HOM05D000170 ORTHO05D000159 8.7e-06 53.5 62 51.6


User provided reference genes

Program Settings