Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa023054 Carpinus fangiana HOM05D007251 ORTHO05D009266 5.1e-99 364.4 181 100.0
QL12p025168 Quercus lobata HOM05D007251 ORTHO05D009266 1.2e-76 290.0 171 82.5
CiPaw.08G020100 Carya illinoinensis HOM05D007251 ORTHO05D009266 7.2e-69 264.2 171 77.2
Cpa.g.sc23.18 Carica papaya HOM05D007251 ORTHO05D009266 8.2e-65 250.8 167 72.5
Thecc.09G007500 Theobroma cacao HOM05D007251 ORTHO05D009266 2.6e-63 245.7 171 71.9
Dinv18148 Davidia involucrata HOM05D007251 ORTHO05D009266 5.0e-62 241.5 172 70.3
Potri.006G273400 Populus trichocarpa HOM05D007251 ORTHO05D009266 1.5e-61 240.0 171 70.2
TAR626G1006 Trochodendron aralioides HOM05D007251 ORTHO05D009266 2.5e-61 239.2 171 68.4
Potri.006G274133 Populus trichocarpa HOM05D007251 ORTHO05D009266 4.2e-61 238.4 167 71.3
Gorai.009G067600 Gossypium raimondii HOM05D007251 ORTHO05D009266 6.1e-60 234.6 172 69.2
MD08G1128000 Malus domestica HOM05D007251 ORTHO05D009266 8.0e-60 234.2 164 70.7
Glyma.14G134800 Glycine max HOM05D007251 ORTHO05D009266 5.2e-59 231.5 167 68.3
Gohir.D05G066800 Gossypium hirsutum HOM05D007251 ORTHO05D009266 5.2e-59 231.5 172 68.6
Nitab4.5_0000502g0130 Nicotiana tabacum HOM05D007251 ORTHO05D009266 2.6e-58 229.2 171 64.9
arahy.Tifrunner.gnm1.ann1.ULFK5V Arachis hypogaea HOM05D007251 ORTHO05D009266 9.7e-58 227.3 172 69.2
Prupe.1G459800 Prunus persica HOM05D007251 ORTHO05D009266 4.8e-57 224.9 171 65.5
Psat6g032880 Pisum sativum HOM05D007251 ORTHO05D009266 6.3e-57 224.6 171 64.9
RcHm_v2.0_Chr6g0305021 Rosa chinensis HOM05D007251 ORTHO05D009266 8.3e-57 224.2 172 64.0
Solyc08g069010.4 Solanum lycopersicum HOM05D007251 ORTHO05D009266 8.3e-57 224.2 171 64.9
Sopen08g022660 Solanum pennellii HOM05D007251 ORTHO05D009266 1.1e-56 223.8 171 64.9
CAN.G908.8 Capsicum annuum HOM05D007251 ORTHO05D009266 1.8e-56 223.0 170 64.1
Nitab4.5_0002023g0010 Nicotiana tabacum HOM05D007251 ORTHO05D009266 4.1e-56 221.9 171 63.2
Glyma.17G197900 Glycine max HOM05D007251 ORTHO05D009266 5.3e-56 221.5 168 64.9
Peaxi162Scf00288g00912 Petunia axillaris HOM05D007251 ORTHO05D009266 9.1e-56 220.7 170 62.9
Phvul.001G059500 Phaseolus vulgaris HOM05D007251 ORTHO05D009266 9.1e-56 220.7 170 64.7
Sabra06G0211800 Salix brachista HOM05D007251 ORTHO05D009266 1.6e-55 219.9 192 61.5
arahy.Tifrunner.gnm1.ann1.5WJ9LU Arachis hypogaea HOM05D007251 ORTHO05D009266 2.0e-55 219.5 172 66.3
FvH4_2g36670 Fragaria vesca HOM05D007251 ORTHO05D009266 2.0e-55 219.5 172 62.2
Lalb_Chr24g0402511 Lupinus albus HOM05D007251 ORTHO05D009266 2.7e-55 219.2 164 64.6
TWI34G2010 Tripterygium wilfordii HOM05D007251 ORTHO05D009266 2.7e-55 219.2 172 65.7
Nn8g40494 Nelumbo nucifera HOM05D007251 ORTHO05D009266 4.5e-55 218.4 159 67.9
VMungo0647G2138 Vigna mungo HOM05D007251 ORTHO05D009266 5.9e-55 218.0 170 63.5
Lj7C750G16 Lonicera japonica HOM05D007251 ORTHO05D009266 2.2e-54 216.1 155 69.7
Eucgr.C02018 Eucalyptus grandis HOM05D007251 ORTHO05D009266 2.9e-54 215.7 156 68.6
FAN27G2253 Fragaria x ananassa HOM05D007251 ORTHO05D009266 5.0e-54 214.9 172 59.9
FAN20G1154 Fragaria x ananassa HOM05D007251 ORTHO05D009266 1.1e-53 213.8 172 61.0
Hund03293 Selenicereus undatus HOM05D007251 ORTHO05D009266 2.5e-53 212.6 167 61.7
CSS0035408 Camellia sinensis var. sinensis HOM05D007251 ORTHO05D009266 9.4e-53 210.7 173 61.8
TPR.G12085 Trifolium pratense HOM05D007251 ORTHO05D009266 2.7e-52 209.1 161 64.0
Gohir.A05G064200 Gossypium hirsutum HOM05D007251 ORTHO05D009266 3.6e-52 208.8 213 54.5
Aqoxy7G03087 Aquilegia oxysepala HOM05D007251 ORTHO05D009266 4.7e-52 208.4 170 60.6
FAN15G3149 Fragaria x ananassa HOM05D007251 ORTHO05D009266 1.4e-51 206.8 172 60.5
SGA_v2.0_scaffold121G33030 Striga asiatica HOM05D007251 ORTHO05D009266 1.4e-51 206.8 162 61.7
SalBow8G5364 Salvia bowleyana HOM05D007251 ORTHO05D009266 2.3e-51 206.1 164 59.8
Medtr1g009650 Medicago truncatula HOM05D007251 ORTHO05D009266 3.0e-51 205.7 169 60.4
SalBow8G3910 Salvia bowleyana HOM05D007251 ORTHO05D009266 3.0e-51 205.7 164 59.1
DCAR_003023 Daucus carota HOM05D007251 ORTHO05D009266 8.8e-51 204.1 166 60.8
Migut.E01424 Erythranthe guttata HOM05D007251 ORTHO05D009266 8.8e-51 204.1 166 58.4
CANSAT56G3637 Cannabis sativa HOM05D007251 ORTHO05D009266 7.5e-50 201.1 173 59.0
Carub.0006s0915 Capsella rubella HOM05D007251 ORTHO05D009266 7.5e-50 201.1 155 63.9
AUR62009072 Chenopodium quinoa HOM05D007251 ORTHO05D009266 9.8e-50 200.7 171 60.2
Thhalv10013072m.g Eutrema salsugineum HOM05D007251 ORTHO05D009266 1.3e-49 200.3 155 64.5
BcaB05g21499 Brassica carinata HOM05D007251 ORTHO05D009266 6.3e-49 198.0 155 62.6
GSVIVG01035517001 Vitis vinifera HOM05D007251 ORTHO05D009266 2.4e-48 196.1 121 75.2
BcaC03g13325 Brassica carinata HOM05D007251 ORTHO05D009266 4.1e-48 195.3 155 61.9
C02p04590 Brassica napus HOM05D007251 ORTHO05D009266 4.1e-48 195.3 155 61.9
BolC2t06419H Brassica oleracea HOM05D007251 ORTHO05D009266 4.1e-48 195.3 155 61.9
MELO3C003624.2 Cucumis melo HOM05D007251 ORTHO05D009266 4.1e-48 195.3 152 65.1
Ca_12854_v3 Cicer arietinum L. HOM05D007251 ORTHO05D009266 5.4e-48 194.9 220 49.1
AT5G10690 Arabidopsis thaliana HOM05D007251 ORTHO05D009266 1.2e-47 193.7 162 61.1
BraA02t05043Z Brassica rapa HOM05D007251 ORTHO05D009266 1.2e-47 193.7 155 60.6
A02p00600 Brassica napus HOM05D007251 ORTHO05D009266 1.6e-47 193.4 155 60.6
ClCG05G017600 Citrullus lanatus HOM05D007251 ORTHO05D009266 2.7e-47 192.6 156 64.1
Aa31LG3G16450 Aethionema arabicum HOM05D007251 ORTHO05D009266 1.0e-46 190.7 162 59.9
Sp6g32780 Schrenkiella parvula HOM05D007251 ORTHO05D009266 2.9e-46 189.1 155 61.3
Ah.11g043880 Amaranthus hybridus HOM05D007251 ORTHO05D009266 5.0e-46 188.3 165 57.6
AUR62020596 Chenopodium quinoa HOM05D007251 ORTHO05D009266 5.0e-46 188.3 156 61.5
CARHR202630 Cardamine hirsuta HOM05D007251 ORTHO05D009266 1.5e-45 186.8 155 62.6
Duzib168G1420 Durio zibethinus HOM05D007251 ORTHO05D009266 1.9e-45 186.4 111 78.4
ATR0580G362 Amborella trichopoda HOM05D007251 ORTHO05D009266 1.8e-43 179.9 160 53.8
Atru.BG.4.p Acer truncatum HOM05D007251 ORTHO05D009266 4.0e-43 178.7 121 71.9
Os09g0431600 Oryza sativa ssp. japonica HOM05D007251 ORTHO05D009266 4.4e-42 175.3 163 46.6
PSO063G0176 Papaver somniferum HOM05D007251 ORTHO05D009266 8.3e-41 171.0 171 52.6
PSO782G5553 Papaver somniferum HOM05D007251 ORTHO05D009266 1.1e-40 170.6 171 52.6
EL10Ac2g03759 Beta vulgaris HOM05D007251 ORTHO05D009266 2.4e-40 169.5 142 58.5
MBI16_g41809_MAGBIO Magnolia biondii HOM05D007251 ORTHO05D009266 2.7e-39 166.0 134 57.5
Zm00001eb099850 Zea mays HOM05D007251 ORTHO05D009266 8.6e-38 161.0 145 49.0
Haze_21751 Corylus avellana HOM05D007251 ORTHO05D009266 1.7e-33 146.7 93 77.4
COL.COLO4_19030 Corchorus olitorius HOM05D007251 ORTHO05D009266 1.4e-27 127.1 84 75.0
Ciclev10010499m.g Citrus clementina HOM05D007251 ORTHO05D009266 3.1e-27 125.9 149 50.3
Sabra06G0212100 Salix brachista HOM05D007251 ORTHO05D009266 6.8e-27 124.8 114 57.0
Oeu019281.1 Olea europaea HOM05D007251 ORTHO05D009266 4.9e-25 118.6 92 63.0
Mapoly0043s0002 Marchantia polymorpha HOM05D007251 ORTHO05D009266 1.4e-24 117.1 153 38.6
CDE05G1868 Ceratophyllum demersum HOM05D007251 ORTHO05D009266 9.2e-24 114.4 88 61.4
AagrBONN_evm.TU.Sc2ySwM_344.4143 Anthoceros agrestis HOM05D007251 ORTHO05D009266 7.8e-15 84.7 126 34.1
CBR_g20311 Chara braunii HOM05D007251 ORTHO05D009266 3.9e-14 82.4 108 37.0
Oeu042188.1 Olea europaea HOM05D007251 ORTHO05D009266 1.9e-13 80.1 60 63.3
Actinidia22254 Actinidia chinensis HOM05D007251 ORTHO05D009266 4.9e-09 65.5 52 63.5


User provided reference genes

Program Settings